BLASTX nr result
ID: Panax25_contig00008519
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00008519
(424 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KVH97911.1 hypothetical protein Ccrd_023870 [Cynara cardunculus ... 74 5e-14
AFK48998.1 unknown [Lotus japonicus] 70 2e-13
XP_010041873.1 PREDICTED: sm-like protein LSM1B, partial [Eucaly... 70 5e-13
OMO66134.1 hypothetical protein COLO4_30725 [Corchorus olitorius] 70 7e-13
XP_017979087.1 PREDICTED: sm-like protein LSM1B [Theobroma cacao] 70 7e-13
KYP50472.1 U6 snRNA-associated Sm-like protein LSm1 [Cajanus cajan] 70 7e-13
XP_017442401.1 PREDICTED: sm-like protein LSM1B [Vigna angularis... 70 7e-13
XP_017442402.1 PREDICTED: sm-like protein LSM1B [Vigna angularis... 70 7e-13
XP_014516657.1 PREDICTED: sm-like protein LSM1B [Vigna radiata v... 70 7e-13
CDO97831.1 unnamed protein product [Coffea canephora] 70 7e-13
XP_002532727.1 PREDICTED: sm-like protein LSM1B [Ricinus communi... 70 7e-13
XP_002304120.1 small nuclear ribonucleoprotein [Populus trichoca... 70 7e-13
XP_007135420.1 hypothetical protein PHAVU_010G127900g [Phaseolus... 70 7e-13
NP_001237465.1 uncharacterized protein LOC100306352 [Glycine max... 70 7e-13
ABK22805.1 unknown [Picea sitchensis] 71 9e-13
XP_010061830.1 PREDICTED: sm-like protein LSM1B [Eucalyptus gran... 70 9e-13
XP_004510523.1 PREDICTED: sm-like protein LSM1B [Cicer arietinum] 70 9e-13
KJB57033.1 hypothetical protein B456_009G145700 [Gossypium raimo... 69 1e-12
KVI05858.1 Like-Sm (LSM) domain-containing protein [Cynara cardu... 69 1e-12
XP_006298813.1 hypothetical protein CARUB_v10014920mg [Capsella ... 69 1e-12
>KVH97911.1 hypothetical protein Ccrd_023870 [Cynara cardunculus var. scolymus]
Length = 150
Score = 73.9 bits (180), Expect = 5e-14
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = -2
Query: 141 FRCFF*YRESLSSMSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 1
F F +SLS+MSWAGPEDI+LSTSLASYLDKKLLVLLRDGRKL+
Sbjct: 10 FSVIFLIPKSLSAMSWAGPEDIHLSTSLASYLDKKLLVLLRDGRKLL 56
>AFK48998.1 unknown [Lotus japonicus]
Length = 80
Score = 70.5 bits (171), Expect = 2e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = -2
Query: 102 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 1
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 34
>XP_010041873.1 PREDICTED: sm-like protein LSM1B, partial [Eucalyptus grandis]
Length = 100
Score = 70.1 bits (170), Expect = 5e-13
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = -2
Query: 102 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 1
MSWAGPED+YLSTSLASYLDKKLLVLLRDGRKLM
Sbjct: 1 MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLM 34
>OMO66134.1 hypothetical protein COLO4_30725 [Corchorus olitorius]
Length = 128
Score = 70.5 bits (171), Expect = 7e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = -2
Query: 102 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 1
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 34
>XP_017979087.1 PREDICTED: sm-like protein LSM1B [Theobroma cacao]
Length = 128
Score = 70.5 bits (171), Expect = 7e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = -2
Query: 102 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 1
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 34
>KYP50472.1 U6 snRNA-associated Sm-like protein LSm1 [Cajanus cajan]
Length = 128
Score = 70.5 bits (171), Expect = 7e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = -2
Query: 102 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 1
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 34
>XP_017442401.1 PREDICTED: sm-like protein LSM1B [Vigna angularis] BAT98277.1
hypothetical protein VIGAN_09192000 [Vigna angularis
var. angularis]
Length = 128
Score = 70.5 bits (171), Expect = 7e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = -2
Query: 102 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 1
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 34
>XP_017442402.1 PREDICTED: sm-like protein LSM1B [Vigna angularis] BAT98276.1
hypothetical protein VIGAN_09191900 [Vigna angularis
var. angularis]
Length = 128
Score = 70.5 bits (171), Expect = 7e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = -2
Query: 102 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 1
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 34
>XP_014516657.1 PREDICTED: sm-like protein LSM1B [Vigna radiata var. radiata]
Length = 128
Score = 70.5 bits (171), Expect = 7e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = -2
Query: 102 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 1
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 34
>CDO97831.1 unnamed protein product [Coffea canephora]
Length = 128
Score = 70.5 bits (171), Expect = 7e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = -2
Query: 102 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 1
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 34
>XP_002532727.1 PREDICTED: sm-like protein LSM1B [Ricinus communis] EEF29658.1
lsm1, putative [Ricinus communis]
Length = 128
Score = 70.5 bits (171), Expect = 7e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = -2
Query: 102 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 1
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 34
>XP_002304120.1 small nuclear ribonucleoprotein [Populus trichocarpa] EEE79099.1
small nuclear ribonucleoprotein [Populus trichocarpa]
Length = 128
Score = 70.5 bits (171), Expect = 7e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = -2
Query: 102 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 1
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 34
>XP_007135420.1 hypothetical protein PHAVU_010G127900g [Phaseolus vulgaris]
ESW07414.1 hypothetical protein PHAVU_010G127900g
[Phaseolus vulgaris]
Length = 128
Score = 70.5 bits (171), Expect = 7e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = -2
Query: 102 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 1
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 34
>NP_001237465.1 uncharacterized protein LOC100306352 [Glycine max] XP_007135419.1
hypothetical protein PHAVU_010G127800g [Phaseolus
vulgaris] XP_014516654.1 PREDICTED: sm-like protein
LSM1B isoform X1 [Vigna radiata var. radiata] ACU14485.1
unknown [Glycine max] ESW07413.1 hypothetical protein
PHAVU_010G127800g [Phaseolus vulgaris] KHN01428.1 U6
snRNA-associated Sm-like protein LSm1 [Glycine soja]
KHN39613.1 U6 snRNA-associated Sm-like protein LSm1
[Glycine soja] KRH47635.1 hypothetical protein
GLYMA_07G040900 [Glycine max]
Length = 128
Score = 70.5 bits (171), Expect = 7e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = -2
Query: 102 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 1
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 34
>ABK22805.1 unknown [Picea sitchensis]
Length = 172
Score = 71.2 bits (173), Expect = 9e-13
Identities = 34/41 (82%), Positives = 37/41 (90%)
Frame = -2
Query: 123 YRESLSSMSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 1
+RE MSWAGPEDI+LSTSLASYLDKKLLVLLRDGRKL+
Sbjct: 38 FREQEEGMSWAGPEDIFLSTSLASYLDKKLLVLLRDGRKLI 78
>XP_010061830.1 PREDICTED: sm-like protein LSM1B [Eucalyptus grandis] KCW68858.1
hypothetical protein EUGRSUZ_F02453 [Eucalyptus grandis]
KCW68859.1 hypothetical protein EUGRSUZ_F02453
[Eucalyptus grandis]
Length = 128
Score = 70.1 bits (170), Expect = 9e-13
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = -2
Query: 102 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 1
MSWAGPED+YLSTSLASYLDKKLLVLLRDGRKLM
Sbjct: 1 MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLM 34
>XP_004510523.1 PREDICTED: sm-like protein LSM1B [Cicer arietinum]
Length = 128
Score = 70.1 bits (170), Expect = 9e-13
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = -2
Query: 102 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 1
MSWAGPEDIYLSTSLASYLDKKLL+LLRDGRKLM
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLILLRDGRKLM 34
>KJB57033.1 hypothetical protein B456_009G145700 [Gossypium raimondii]
Length = 106
Score = 69.3 bits (168), Expect = 1e-12
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = -2
Query: 102 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 1
MSWAGPEDIYLSTSLASYLD+KLLVLLRDGRKLM
Sbjct: 1 MSWAGPEDIYLSTSLASYLDRKLLVLLRDGRKLM 34
>KVI05858.1 Like-Sm (LSM) domain-containing protein [Cynara cardunculus var.
scolymus]
Length = 107
Score = 69.3 bits (168), Expect = 1e-12
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = -2
Query: 102 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 1
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKL+
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLL 34
>XP_006298813.1 hypothetical protein CARUB_v10014920mg [Capsella rubella]
EOA31711.1 hypothetical protein CARUB_v10014920mg
[Capsella rubella]
Length = 107
Score = 69.3 bits (168), Expect = 1e-12
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = -2
Query: 102 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLM 1
MSWAGPEDIYLSTSLASYLD+KLLVLLRDGRKLM
Sbjct: 1 MSWAGPEDIYLSTSLASYLDRKLLVLLRDGRKLM 34