BLASTX nr result
ID: Panax25_contig00008169
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00008169
(495 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017252890.1 PREDICTED: DNA mismatch repair protein MLH3 isofo... 78 1e-13
XP_017252889.1 PREDICTED: DNA mismatch repair protein MLH3 isofo... 78 1e-13
XP_017252888.1 PREDICTED: DNA mismatch repair protein MLH3 isofo... 78 1e-13
KZM93449.1 hypothetical protein DCAR_016694 [Daucus carota subsp... 78 1e-13
XP_019075106.1 PREDICTED: DNA mismatch repair protein MLH3 isofo... 74 2e-12
CBI37639.3 unnamed protein product, partial [Vitis vinifera] 74 2e-12
XP_010649440.1 PREDICTED: DNA mismatch repair protein MLH3 isofo... 74 2e-12
XP_010649435.1 PREDICTED: DNA mismatch repair protein MLH3 isofo... 74 2e-12
KVI08712.1 DNA mismatch repair, conserved site-containing protei... 72 9e-12
XP_018811710.1 PREDICTED: DNA mismatch repair protein MLH3-like ... 62 5e-08
KVH92175.1 Calcium-binding EF-hand [Cynara cardunculus var. scol... 52 6e-07
XP_010244210.1 PREDICTED: mitochondrial Rho GTPase 1-like [Nelum... 51 1e-06
KZM84204.1 hypothetical protein DCAR_028249 [Daucus carota subsp... 57 2e-06
XP_017223218.1 PREDICTED: mitochondrial Rho GTPase 1-like [Daucu... 57 2e-06
XP_019182756.1 PREDICTED: DNA mismatch repair protein MLH3 isofo... 57 3e-06
XP_019182753.1 PREDICTED: DNA mismatch repair protein MLH3 isofo... 57 3e-06
XP_019182752.1 PREDICTED: DNA mismatch repair protein MLH3 isofo... 57 3e-06
XP_019182750.1 PREDICTED: DNA mismatch repair protein MLH3 isofo... 57 3e-06
XP_004495731.1 PREDICTED: mitochondrial Rho GTPase 1-like [Cicer... 54 3e-06
XP_012089066.1 PREDICTED: mitochondrial Rho GTPase 1-like [Jatro... 50 4e-06
>XP_017252890.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X3 [Daucus carota
subsp. sativus]
Length = 1045
Score = 77.8 bits (190), Expect = 1e-13
Identities = 47/95 (49%), Positives = 58/95 (61%)
Frame = +1
Query: 64 DEDEDRRDQIRCHEKVYVKRPRRSHSAPPLYRGKKKFLACNSGLNMEAGNTQIATTYDGS 243
D + D R +IR EK Y KRPR SHSAPP YRGKKKF NS EA N Q+ +T+D S
Sbjct: 806 DANADGRSEIRGGEKAYGKRPR-SHSAPPYYRGKKKFSILNSLSYTEALNAQVVSTHDAS 864
Query: 244 TLKGTCDMKHPKQSSGLYHLSSKPQSVLDSLNDSR 348
LK T +++ KQ SG+ SS SV +N+ R
Sbjct: 865 ILKETYVVENNKQLSGVCRPSSNLYSVNGLINNMR 899
>XP_017252889.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X2 [Daucus carota
subsp. sativus]
Length = 1133
Score = 77.8 bits (190), Expect = 1e-13
Identities = 47/95 (49%), Positives = 58/95 (61%)
Frame = +1
Query: 64 DEDEDRRDQIRCHEKVYVKRPRRSHSAPPLYRGKKKFLACNSGLNMEAGNTQIATTYDGS 243
D + D R +IR EK Y KRPR SHSAPP YRGKKKF NS EA N Q+ +T+D S
Sbjct: 806 DANADGRSEIRGGEKAYGKRPR-SHSAPPYYRGKKKFSILNSLSYTEALNAQVVSTHDAS 864
Query: 244 TLKGTCDMKHPKQSSGLYHLSSKPQSVLDSLNDSR 348
LK T +++ KQ SG+ SS SV +N+ R
Sbjct: 865 ILKETYVVENNKQLSGVCRPSSNLYSVNGLINNMR 899
>XP_017252888.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X1 [Daucus carota
subsp. sativus]
Length = 1235
Score = 77.8 bits (190), Expect = 1e-13
Identities = 47/95 (49%), Positives = 58/95 (61%)
Frame = +1
Query: 64 DEDEDRRDQIRCHEKVYVKRPRRSHSAPPLYRGKKKFLACNSGLNMEAGNTQIATTYDGS 243
D + D R +IR EK Y KRPR SHSAPP YRGKKKF NS EA N Q+ +T+D S
Sbjct: 806 DANADGRSEIRGGEKAYGKRPR-SHSAPPYYRGKKKFSILNSLSYTEALNAQVVSTHDAS 864
Query: 244 TLKGTCDMKHPKQSSGLYHLSSKPQSVLDSLNDSR 348
LK T +++ KQ SG+ SS SV +N+ R
Sbjct: 865 ILKETYVVENNKQLSGVCRPSSNLYSVNGLINNMR 899
>KZM93449.1 hypothetical protein DCAR_016694 [Daucus carota subsp. sativus]
Length = 1344
Score = 77.8 bits (190), Expect = 1e-13
Identities = 47/95 (49%), Positives = 58/95 (61%)
Frame = +1
Query: 64 DEDEDRRDQIRCHEKVYVKRPRRSHSAPPLYRGKKKFLACNSGLNMEAGNTQIATTYDGS 243
D + D R +IR EK Y KRPR SHSAPP YRGKKKF NS EA N Q+ +T+D S
Sbjct: 910 DANADGRSEIRGGEKAYGKRPR-SHSAPPYYRGKKKFSILNSLSYTEALNAQVVSTHDAS 968
Query: 244 TLKGTCDMKHPKQSSGLYHLSSKPQSVLDSLNDSR 348
LK T +++ KQ SG+ SS SV +N+ R
Sbjct: 969 ILKETYVVENNKQLSGVCRPSSNLYSVNGLINNMR 1003
>XP_019075106.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X3 [Vitis
vinifera]
Length = 1164
Score = 74.3 bits (181), Expect = 2e-12
Identities = 41/107 (38%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Frame = +1
Query: 25 AEPSHHISSTICVDEDEDRRDQIR---CHEKVYVKRPRRSHSAPPLYRGKKKFLACNSGL 195
A PS I + + +DE++++++R C + K RSHSAPP+YRGK+KFLA N
Sbjct: 710 AVPSCSIPLSTNIHKDENKKERLRYQNCGQIHASKERSRSHSAPPIYRGKRKFLALNDHW 769
Query: 196 NMEAGNTQIATTYDGSTLKGTCDMKHPKQSSGLYHLSSKPQSVLDSL 336
ME+ + ++D T T ++KHP QSSG + KP + D L
Sbjct: 770 TMESKKVDVIDSHDAPTFPETDELKHPLQSSGACNQYFKPSFLEDPL 816
>CBI37639.3 unnamed protein product, partial [Vitis vinifera]
Length = 1230
Score = 74.3 bits (181), Expect = 2e-12
Identities = 41/107 (38%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Frame = +1
Query: 25 AEPSHHISSTICVDEDEDRRDQIR---CHEKVYVKRPRRSHSAPPLYRGKKKFLACNSGL 195
A PS I + + +DE++++++R C + K RSHSAPP+YRGK+KFLA N
Sbjct: 776 AVPSCSIPLSTNIHKDENKKERLRYQNCGQIHASKERSRSHSAPPIYRGKRKFLALNDHW 835
Query: 196 NMEAGNTQIATTYDGSTLKGTCDMKHPKQSSGLYHLSSKPQSVLDSL 336
ME+ + ++D T T ++KHP QSSG + KP + D L
Sbjct: 836 TMESKKVDVIDSHDAPTFPETDELKHPLQSSGACNQYFKPSFLEDPL 882
>XP_010649440.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X2 [Vitis
vinifera]
Length = 1245
Score = 74.3 bits (181), Expect = 2e-12
Identities = 41/107 (38%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Frame = +1
Query: 25 AEPSHHISSTICVDEDEDRRDQIR---CHEKVYVKRPRRSHSAPPLYRGKKKFLACNSGL 195
A PS I + + +DE++++++R C + K RSHSAPP+YRGK+KFLA N
Sbjct: 795 AVPSCSIPLSTNIHKDENKKERLRYQNCGQIHASKERSRSHSAPPIYRGKRKFLALNDHW 854
Query: 196 NMEAGNTQIATTYDGSTLKGTCDMKHPKQSSGLYHLSSKPQSVLDSL 336
ME+ + ++D T T ++KHP QSSG + KP + D L
Sbjct: 855 TMESKKVDVIDSHDAPTFPETDELKHPLQSSGACNQYFKPSFLEDPL 901
>XP_010649435.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X1 [Vitis
vinifera] XP_010649438.1 PREDICTED: DNA mismatch repair
protein MLH3 isoform X1 [Vitis vinifera] XP_010649439.1
PREDICTED: DNA mismatch repair protein MLH3 isoform X1
[Vitis vinifera]
Length = 1249
Score = 74.3 bits (181), Expect = 2e-12
Identities = 41/107 (38%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Frame = +1
Query: 25 AEPSHHISSTICVDEDEDRRDQIR---CHEKVYVKRPRRSHSAPPLYRGKKKFLACNSGL 195
A PS I + + +DE++++++R C + K RSHSAPP+YRGK+KFLA N
Sbjct: 795 AVPSCSIPLSTNIHKDENKKERLRYQNCGQIHASKERSRSHSAPPIYRGKRKFLALNDHW 854
Query: 196 NMEAGNTQIATTYDGSTLKGTCDMKHPKQSSGLYHLSSKPQSVLDSL 336
ME+ + ++D T T ++KHP QSSG + KP + D L
Sbjct: 855 TMESKKVDVIDSHDAPTFPETDELKHPLQSSGACNQYFKPSFLEDPL 901
>KVI08712.1 DNA mismatch repair, conserved site-containing protein [Cynara
cardunculus var. scolymus]
Length = 1257
Score = 72.4 bits (176), Expect = 9e-12
Identities = 39/104 (37%), Positives = 58/104 (55%)
Frame = +1
Query: 37 HHISSTICVDEDEDRRDQIRCHEKVYVKRPRRSHSAPPLYRGKKKFLACNSGLNMEAGNT 216
HH+SS+ D ++ + Q +K PRRS SAPP YRGKKKF A S +++G +
Sbjct: 800 HHVSSSFYADGEKSKIAQCSLQDK----HPRRSRSAPPSYRGKKKFFALTSWTTIKSGKS 855
Query: 217 QIATTYDGSTLKGTCDMKHPKQSSGLYHLSSKPQSVLDSLNDSR 348
++ TL+ +KH ++SSG+ HLS +DS + SR
Sbjct: 856 CYKALHNAPTLQEDSHLKHLQKSSGVDHLSQNEGPAIDSQSKSR 899
>XP_018811710.1 PREDICTED: DNA mismatch repair protein MLH3-like [Juglans regia]
Length = 1041
Score = 61.6 bits (148), Expect = 5e-08
Identities = 41/105 (39%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Frame = +1
Query: 61 VDEDEDRRD----QIRCHEKVYVKRPRRSHSAPPLYRGKKKFLACNSGLNMEAGNTQIAT 228
VD+ E +RD Q ++V KR RRS SAPP YRGK++F + N M+AG
Sbjct: 595 VDKYESQRDTMGYQDSEQDRVPKKRSRRSLSAPPFYRGKRRFFSLNCPSIMKAGKPGAKI 654
Query: 229 TYDGSTLKGTCDMKHPKQSSGLYHLSSKPQSVLDSLNDSR*RCRL 363
++ +KH KQ SG +HL KP SV L+D+ RL
Sbjct: 655 FHNALPYPEDDLLKHAKQPSGAHHLYFKPSSVEHLLSDNSLAFRL 699
>KVH92175.1 Calcium-binding EF-hand [Cynara cardunculus var. scolymus]
Length = 749
Score = 52.0 bits (123), Expect(2) = 6e-07
Identities = 22/30 (73%), Positives = 29/30 (96%)
Frame = +3
Query: 372 GCKLDLRDDQHSVSLEQVMSPLMQQFQKLK 461
GCKLDLRD+Q +VSLEQVMSP+MQQF++++
Sbjct: 125 GCKLDLRDEQQAVSLEQVMSPIMQQFREIE 154
Score = 28.5 bits (62), Expect(2) = 6e-07
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2
Query: 452 KIETCIECSALNHI 493
+IETCIECSA HI
Sbjct: 152 EIETCIECSAFKHI 165
>XP_010244210.1 PREDICTED: mitochondrial Rho GTPase 1-like [Nelumbo nucifera]
XP_010244211.1 PREDICTED: mitochondrial Rho GTPase
1-like [Nelumbo nucifera]
Length = 646
Score = 51.2 bits (121), Expect(2) = 1e-06
Identities = 22/30 (73%), Positives = 27/30 (90%)
Frame = +3
Query: 372 GCKLDLRDDQHSVSLEQVMSPLMQQFQKLK 461
GCKLDLRDD VSLEQVMSP+MQQF++++
Sbjct: 125 GCKLDLRDDNQQVSLEQVMSPIMQQFREIE 154
Score = 28.1 bits (61), Expect(2) = 1e-06
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +2
Query: 452 KIETCIECSALNHI 493
+IETCIECSA+N I
Sbjct: 152 EIETCIECSAVNQI 165
>KZM84204.1 hypothetical protein DCAR_028249 [Daucus carota subsp. sativus]
Length = 308
Score = 56.6 bits (135), Expect = 2e-06
Identities = 27/43 (62%), Positives = 35/43 (81%), Gaps = 3/43 (6%)
Frame = +3
Query: 372 GCKLDLRDDQHSVSLEQVMSPLMQQFQKLK---RVSNVRHLTI 491
GCKLDLRD+QHSVSLEQVMSP+MQQF++++ S + H+ I
Sbjct: 121 GCKLDLRDEQHSVSLEQVMSPIMQQFREIETCIECSALNHIQI 163
>XP_017223218.1 PREDICTED: mitochondrial Rho GTPase 1-like [Daucus carota subsp.
sativus]
Length = 641
Score = 56.6 bits (135), Expect = 2e-06
Identities = 27/43 (62%), Positives = 35/43 (81%), Gaps = 3/43 (6%)
Frame = +3
Query: 372 GCKLDLRDDQHSVSLEQVMSPLMQQFQKLK---RVSNVRHLTI 491
GCKLDLRD+QHSVSLEQVMSP+MQQF++++ S + H+ I
Sbjct: 121 GCKLDLRDEQHSVSLEQVMSPIMQQFREIETCIECSALNHIQI 163
>XP_019182756.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X4 [Ipomoea nil]
Length = 1050
Score = 56.6 bits (135), Expect = 3e-06
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Frame = +1
Query: 34 SHHISSTICVDEDEDRRDQIRCHEKVY--VKRPRRSHSAPPLYRGKKKFLACNSGLNMEA 207
S H +S+I D D R R K++ +R RRS+SAPP YRG+KKFLA + L M
Sbjct: 751 SRHHASSIGFDCDSCTRVHPRNLSKMFDPYRRGRRSNSAPPFYRGRKKFLALSDSLTMTT 810
Query: 208 GNTQIATTYDGSTLKGTCDMK---HPKQSSGL 294
G + T + G+ +MK HP + +G+
Sbjct: 811 GKVNLQTIHHCPGFPGSNNMKQIQHPSEVNGV 842
>XP_019182753.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X3 [Ipomoea
nil]
Length = 1152
Score = 56.6 bits (135), Expect = 3e-06
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Frame = +1
Query: 34 SHHISSTICVDEDEDRRDQIRCHEKVY--VKRPRRSHSAPPLYRGKKKFLACNSGLNMEA 207
S H +S+I D D R R K++ +R RRS+SAPP YRG+KKFLA + L M
Sbjct: 724 SRHHASSIGFDCDSCTRVHPRNLSKMFDPYRRGRRSNSAPPFYRGRKKFLALSDSLTMTT 783
Query: 208 GNTQIATTYDGSTLKGTCDMK---HPKQSSGL 294
G + T + G+ +MK HP + +G+
Sbjct: 784 GKVNLQTIHHCPGFPGSNNMKQIQHPSEVNGV 815
>XP_019182752.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X2 [Ipomoea
nil]
Length = 1152
Score = 56.6 bits (135), Expect = 3e-06
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Frame = +1
Query: 34 SHHISSTICVDEDEDRRDQIRCHEKVY--VKRPRRSHSAPPLYRGKKKFLACNSGLNMEA 207
S H +S+I D D R R K++ +R RRS+SAPP YRG+KKFLA + L M
Sbjct: 724 SRHHASSIGFDCDSCTRVHPRNLSKMFDPYRRGRRSNSAPPFYRGRKKFLALSDSLTMTT 783
Query: 208 GNTQIATTYDGSTLKGTCDMK---HPKQSSGL 294
G + T + G+ +MK HP + +G+
Sbjct: 784 GKVNLQTIHHCPGFPGSNNMKQIQHPSEVNGV 815
>XP_019182750.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X1 [Ipomoea nil]
XP_019182751.1 PREDICTED: DNA mismatch repair protein
MLH3 isoform X1 [Ipomoea nil]
Length = 1179
Score = 56.6 bits (135), Expect = 3e-06
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Frame = +1
Query: 34 SHHISSTICVDEDEDRRDQIRCHEKVY--VKRPRRSHSAPPLYRGKKKFLACNSGLNMEA 207
S H +S+I D D R R K++ +R RRS+SAPP YRG+KKFLA + L M
Sbjct: 751 SRHHASSIGFDCDSCTRVHPRNLSKMFDPYRRGRRSNSAPPFYRGRKKFLALSDSLTMTT 810
Query: 208 GNTQIATTYDGSTLKGTCDMK---HPKQSSGL 294
G + T + G+ +MK HP + +G+
Sbjct: 811 GKVNLQTIHHCPGFPGSNNMKQIQHPSEVNGV 842
>XP_004495731.1 PREDICTED: mitochondrial Rho GTPase 1-like [Cicer arietinum]
Length = 644
Score = 54.3 bits (129), Expect(2) = 3e-06
Identities = 23/30 (76%), Positives = 28/30 (93%)
Frame = +3
Query: 372 GCKLDLRDDQHSVSLEQVMSPLMQQFQKLK 461
GCKLDLRDD H VSLEQVMSP+MQQF++++
Sbjct: 124 GCKLDLRDDNHQVSLEQVMSPIMQQFREIE 153
Score = 23.9 bits (50), Expect(2) = 3e-06
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +2
Query: 452 KIETCIECSA 481
+IETCIECSA
Sbjct: 151 EIETCIECSA 160
>XP_012089066.1 PREDICTED: mitochondrial Rho GTPase 1-like [Jatropha curcas]
XP_012089067.1 PREDICTED: mitochondrial Rho GTPase
1-like [Jatropha curcas] KDP23523.1 hypothetical protein
JCGZ_23356 [Jatropha curcas]
Length = 652
Score = 50.4 bits (119), Expect(2) = 4e-06
Identities = 21/30 (70%), Positives = 28/30 (93%)
Frame = +3
Query: 372 GCKLDLRDDQHSVSLEQVMSPLMQQFQKLK 461
GCKLDLRD+ + VSLEQVMSP+MQQF++++
Sbjct: 126 GCKLDLRDENYQVSLEQVMSPIMQQFREIE 155
Score = 27.3 bits (59), Expect(2) = 4e-06
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2
Query: 452 KIETCIECSALNHI 493
+IETCIECSA HI
Sbjct: 153 EIETCIECSAHKHI 166