BLASTX nr result
ID: Panax25_contig00008108
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00008108
(954 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017246988.1 PREDICTED: 5'-3' exoribonuclease 3 [Daucus carota... 127 9e-49
KZM98779.1 hypothetical protein DCAR_013859 [Daucus carota subsp... 127 9e-49
XP_019263960.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X... 80 1e-27
XP_019263961.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X... 80 1e-27
XP_016506516.1 PREDICTED: 5'-3' exoribonuclease 3-like [Nicotian... 77 3e-27
XP_016568375.1 PREDICTED: 5'-3' exoribonuclease 3 [Capsicum annuum] 77 6e-27
XP_016499023.1 PREDICTED: 5'-3' exoribonuclease 3-like, partial ... 77 5e-26
XP_016550964.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X... 83 1e-25
XP_016550966.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X... 83 1e-25
XP_016550967.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X... 83 1e-25
XP_009627640.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X... 79 3e-25
XP_009627641.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X... 79 3e-25
XP_018633777.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X... 79 3e-25
XP_015162093.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X... 72 7e-24
XP_015162094.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X... 72 7e-24
XP_015162095.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X... 72 7e-24
XP_015162096.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X... 72 7e-24
KVH96391.1 5'-3' exoribonuclease [Cynara cardunculus var. scolymus] 83 2e-23
XP_017253271.1 PREDICTED: 5'-3' exoribonuclease 3-like [Daucus c... 110 5e-23
CAN82967.1 hypothetical protein VITISV_021856 [Vitis vinifera] 106 5e-22
>XP_017246988.1 PREDICTED: 5'-3' exoribonuclease 3 [Daucus carota subsp. sativus]
Length = 1018
Score = 127 bits (319), Expect(2) = 9e-49
Identities = 62/99 (62%), Positives = 69/99 (69%), Gaps = 1/99 (1%)
Frame = -3
Query: 607 DQSRDYLSHGHYAPGLQQNGYVYQPRGPHHVAQ-TPPIPAGAQFYQQGGYNNRGSFQSYG 431
D +R Y S G+YA G NG+VYQPRGPHH Q PP PAGA +YQQGGYNNRGS+QS+
Sbjct: 909 DNNRGYSSQGYYAQGSHSNGHVYQPRGPHHAIQGRPPSPAGAPYYQQGGYNNRGSYQSHN 968
Query: 430 ATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSALD 314
NYHHQ+ G PP N RDY RPQ FGN FSALD
Sbjct: 969 VGNYHHQNGG---PPTGNQR-GRDYVRPQPFGNKFSALD 1003
Score = 95.9 bits (237), Expect(2) = 9e-49
Identities = 47/77 (61%), Positives = 54/77 (70%)
Frame = -1
Query: 954 HEDSGRKPWENRRHNSQGSISGPHLGDAARRLVANSLQAKTERNGYGDQYAQPPSYAASR 775
HE+SGRKPWENRR+N+QG+ SG HLGDAA R VANSLQ KT+RN GD Y +P YA S
Sbjct: 817 HENSGRKPWENRRNNNQGAGSGRHLGDAAHRFVANSLQTKTDRNVNGDHYTRP--YATSH 874
Query: 774 GPPYPSYQNNRHQGREQ 724
P + S NRH Q
Sbjct: 875 RPAFSSNPTNRHHNYNQ 891
>KZM98779.1 hypothetical protein DCAR_013859 [Daucus carota subsp. sativus]
Length = 1001
Score = 127 bits (319), Expect(2) = 9e-49
Identities = 62/99 (62%), Positives = 69/99 (69%), Gaps = 1/99 (1%)
Frame = -3
Query: 607 DQSRDYLSHGHYAPGLQQNGYVYQPRGPHHVAQ-TPPIPAGAQFYQQGGYNNRGSFQSYG 431
D +R Y S G+YA G NG+VYQPRGPHH Q PP PAGA +YQQGGYNNRGS+QS+
Sbjct: 892 DNNRGYSSQGYYAQGSHSNGHVYQPRGPHHAIQGRPPSPAGAPYYQQGGYNNRGSYQSHN 951
Query: 430 ATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSALD 314
NYHHQ+ G PP N RDY RPQ FGN FSALD
Sbjct: 952 VGNYHHQNGG---PPTGNQR-GRDYVRPQPFGNKFSALD 986
Score = 95.9 bits (237), Expect(2) = 9e-49
Identities = 47/77 (61%), Positives = 54/77 (70%)
Frame = -1
Query: 954 HEDSGRKPWENRRHNSQGSISGPHLGDAARRLVANSLQAKTERNGYGDQYAQPPSYAASR 775
HE+SGRKPWENRR+N+QG+ SG HLGDAA R VANSLQ KT+RN GD Y +P YA S
Sbjct: 800 HENSGRKPWENRRNNNQGAGSGRHLGDAAHRFVANSLQTKTDRNVNGDHYTRP--YATSH 857
Query: 774 GPPYPSYQNNRHQGREQ 724
P + S NRH Q
Sbjct: 858 RPAFSSNPTNRHHNYNQ 874
>XP_019263960.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X1 [Nicotiana
attenuata] OIT36768.1 5'-3' exoribonuclease 3 [Nicotiana
attenuata]
Length = 1083
Score = 80.1 bits (196), Expect(2) = 1e-27
Identities = 44/80 (55%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Frame = -1
Query: 954 HEDSGRKPWENRRHNSQGSISGPHLGDAARRLVANSLQAKTERNGYGD-QYAQPPSYAAS 778
HEDSGRKPWEN R+ G SG H+G+AA RLVANSLQ R+G+GD +AQP +Y A+
Sbjct: 850 HEDSGRKPWENGRNQHPGGNSGRHVGEAAHRLVANSLQM---RSGHGDYAHAQPAAYPAT 906
Query: 777 RGPPYPSYQNNRHQGREQYR 718
G P+PS ++R+ G+E R
Sbjct: 907 HG-PFPS--SHRYNGQEHVR 923
Score = 72.4 bits (176), Expect(2) = 1e-27
Identities = 46/108 (42%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Frame = -3
Query: 628 ERSELLTDQSRDYLSHGHYAPGLQQN---GYVYQPRGPHHVAQTPPIPAGAQFYQQ-GGY 461
ER SRDY HGH+ + QN GY HV+QTP IP A F+QQ GY
Sbjct: 964 ERGGRPVPPSRDYHRHGHHTAVVPQNVGYGYSSHATRAQHVSQTP-IPPDAHFHQQQSGY 1022
Query: 460 NNRGSFQSYGATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSAL 317
+N S+Q Y A +Y+ + GGG PQ + N +R Y P+ N FSAL
Sbjct: 1023 DNYTSYQPYVAGSYNQR--GGGWTPQVSQNVARGYSNPRPSSNHFSAL 1068
>XP_019263961.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X2 [Nicotiana
attenuata]
Length = 973
Score = 80.1 bits (196), Expect(2) = 1e-27
Identities = 44/80 (55%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Frame = -1
Query: 954 HEDSGRKPWENRRHNSQGSISGPHLGDAARRLVANSLQAKTERNGYGD-QYAQPPSYAAS 778
HEDSGRKPWEN R+ G SG H+G+AA RLVANSLQ R+G+GD +AQP +Y A+
Sbjct: 740 HEDSGRKPWENGRNQHPGGNSGRHVGEAAHRLVANSLQM---RSGHGDYAHAQPAAYPAT 796
Query: 777 RGPPYPSYQNNRHQGREQYR 718
G P+PS ++R+ G+E R
Sbjct: 797 HG-PFPS--SHRYNGQEHVR 813
Score = 72.4 bits (176), Expect(2) = 1e-27
Identities = 46/108 (42%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Frame = -3
Query: 628 ERSELLTDQSRDYLSHGHYAPGLQQN---GYVYQPRGPHHVAQTPPIPAGAQFYQQ-GGY 461
ER SRDY HGH+ + QN GY HV+QTP IP A F+QQ GY
Sbjct: 854 ERGGRPVPPSRDYHRHGHHTAVVPQNVGYGYSSHATRAQHVSQTP-IPPDAHFHQQQSGY 912
Query: 460 NNRGSFQSYGATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSAL 317
+N S+Q Y A +Y+ + GGG PQ + N +R Y P+ N FSAL
Sbjct: 913 DNYTSYQPYVAGSYNQR--GGGWTPQVSQNVARGYSNPRPSSNHFSAL 958
>XP_016506516.1 PREDICTED: 5'-3' exoribonuclease 3-like [Nicotiana tabacum]
Length = 500
Score = 77.0 bits (188), Expect(2) = 3e-27
Identities = 45/87 (51%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Frame = -1
Query: 954 HEDSGRKPWENRRHNSQGSISGPHLGDAARRLVANSLQAKTERNGYGD-QYAQPPSYAAS 778
HEDSGRKPWEN R+ G SG H+G+AA RLVANSLQ +G+GD +AQP +Y A+
Sbjct: 267 HEDSGRKPWENGRNQHPGGNSGRHVGEAAHRLVANSLQM---GSGHGDYAHAQPAAYPAT 323
Query: 777 RGPPYPSYQNNRHQGREQYRMAPPNAA 697
G P+PS ++R+ G+E R + AA
Sbjct: 324 HG-PFPS--SHRYNGQEHDRSSFKYAA 347
Score = 74.3 bits (181), Expect(2) = 3e-27
Identities = 47/108 (43%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Frame = -3
Query: 628 ERSELLTDQSRDYLSHGHYAPGLQQN---GYVYQPRGPHHVAQTPPIPAGAQFYQQ-GGY 461
ER SRDY HGH++ + QN GY HV+QTP IP A F+QQ GY
Sbjct: 381 ERGGRPVPPSRDYHRHGHHSAVVPQNVGYGYSSHATRAQHVSQTP-IPPDAHFHQQQSGY 439
Query: 460 NNRGSFQSYGATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSAL 317
+N S+Q Y A +Y+ Q GGG PQ + N +R Y P+ N FSAL
Sbjct: 440 DNYTSYQPYVAGSYNQQ--GGGWTPQVSQNVARGYSNPRPSSNHFSAL 485
>XP_016568375.1 PREDICTED: 5'-3' exoribonuclease 3 [Capsicum annuum]
Length = 1091
Score = 77.0 bits (188), Expect(2) = 6e-27
Identities = 44/80 (55%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Frame = -1
Query: 954 HEDSGRKPWENRRHNSQGSISGPHLGDAARRLVANSLQAKTERNGYGD-QYAQPPSYAAS 778
HEDSGRKPWEN R+ SG HLG+AA RLV+NSLQ R+G+GD ++AQP SY A
Sbjct: 858 HEDSGRKPWENGRNQQPVGNSGRHLGEAAHRLVSNSLQM---RSGHGDNRHAQPASYPAG 914
Query: 777 RGPPYPSYQNNRHQGREQYR 718
G P+PS +NR+ G+ R
Sbjct: 915 YG-PFPS--SNRYNGQGHVR 931
Score = 73.2 bits (178), Expect(2) = 6e-27
Identities = 44/108 (40%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Frame = -3
Query: 628 ERSELLTDQSRDYLSHGHYAPGLQQN---GYVYQPRGPHHVAQTPPIPAGAQFYQQGGYN 458
ER +RDY HGH+A G QN GY P H++++P +P F+QQ GY+
Sbjct: 972 ERGGQPAPPNRDYHRHGHHASGTHQNVGYGYSSHANRPQHLSRSP-VPPIDHFHQQSGYS 1030
Query: 457 NRGSF-QSYGATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSAL 317
N S+ Q Y +Y+ + GGG PQ N N +R YG P+ N FSAL
Sbjct: 1031 NYPSYHQPYEPGSYNPR--GGGWTPQVNQNVARGYGNPRPSSNHFSAL 1076
>XP_016499023.1 PREDICTED: 5'-3' exoribonuclease 3-like, partial [Nicotiana tabacum]
Length = 1079
Score = 77.0 bits (188), Expect(2) = 5e-26
Identities = 45/87 (51%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Frame = -1
Query: 954 HEDSGRKPWENRRHNSQGSISGPHLGDAARRLVANSLQAKTERNGYGD-QYAQPPSYAAS 778
HEDSGRKPWEN R+ G SG H+G+AA RLVANSLQ +G+GD +AQP +Y A+
Sbjct: 850 HEDSGRKPWENGRNQHPGGNSGRHVGEAAHRLVANSLQM---GSGHGDYAHAQPAAYPAT 906
Query: 777 RGPPYPSYQNNRHQGREQYRMAPPNAA 697
G P+PS ++R+ G+E R + AA
Sbjct: 907 HG-PFPS--SHRYNGQEHDRSSFKYAA 930
Score = 70.1 bits (170), Expect(2) = 5e-26
Identities = 44/105 (41%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Frame = -3
Query: 628 ERSELLTDQSRDYLSHGHYAPGLQQN---GYVYQPRGPHHVAQTPPIPAGAQFYQQ-GGY 461
ER SRDY HGH++ + QN GY HV+QTP IP A F+QQ GY
Sbjct: 964 ERGGRPVPPSRDYHRHGHHSAVVPQNVGYGYSSHATRAQHVSQTP-IPPDAHFHQQQSGY 1022
Query: 460 NNRGSFQSYGATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTF 326
+N S+Q Y A +Y+ Q GGG PQ + N +R Y P+ N F
Sbjct: 1023 DNYTSYQPYVAGSYNQQ--GGGWTPQVSQNVARGYSNPRPSSNLF 1065
>XP_016550964.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X1 [Capsicum annuum]
Length = 1109
Score = 82.8 bits (203), Expect(2) = 1e-25
Identities = 45/105 (42%), Positives = 59/105 (56%), Gaps = 13/105 (12%)
Frame = -1
Query: 954 HEDSGRKPWENRRHNSQGSISGPHLGDAARRLVANSLQAKTERNGYGD------------ 811
HE+ +KPWEN R + +G++SG LG+AA RLV NSLQ K +R G+ D
Sbjct: 868 HEEHRKKPWENGRSHPRGAMSGRQLGEAAHRLVLNSLQKKEDRGGHDDYRRTHNGQGHSD 927
Query: 810 -QYAQPPSYAASRGPPYPSYQNNRHQGREQYRMAPPNAAHLAHSS 679
+AQP SY A+RGPP PS Q R+ E R P+ H A +
Sbjct: 928 YMHAQPVSYPAARGPPVPSLQTQRYNVHENVR---PSFGHSARDA 969
Score = 63.2 bits (152), Expect(2) = 1e-25
Identities = 37/96 (38%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Frame = -3
Query: 598 RDYLSHGHYAPGLQQNG---YVYQPRGPHHVAQTPPIPAGAQFYQQGGYNNRGSFQSYGA 428
RDY HGH+ +QQNG Y P HV Q P +P F+QQ G+N S++ YGA
Sbjct: 1005 RDYRGHGHHIDRMQQNGGQNYSSHGSHPQHVGQIP-VPPTPNFHQQSGFNTSASYEPYGA 1063
Query: 427 TNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSA 320
+++ +S GGR R++ P GN FSA
Sbjct: 1064 GSFNQRS--GGRASHNQNVKGRNHPHPS--GNQFSA 1095
>XP_016550966.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X2 [Capsicum annuum]
Length = 1105
Score = 82.8 bits (203), Expect(2) = 1e-25
Identities = 45/105 (42%), Positives = 59/105 (56%), Gaps = 13/105 (12%)
Frame = -1
Query: 954 HEDSGRKPWENRRHNSQGSISGPHLGDAARRLVANSLQAKTERNGYGD------------ 811
HE+ +KPWEN R + +G++SG LG+AA RLV NSLQ K +R G+ D
Sbjct: 864 HEEHRKKPWENGRSHPRGAMSGRQLGEAAHRLVLNSLQKKEDRGGHDDYRRTHNGQGHSD 923
Query: 810 -QYAQPPSYAASRGPPYPSYQNNRHQGREQYRMAPPNAAHLAHSS 679
+AQP SY A+RGPP PS Q R+ E R P+ H A +
Sbjct: 924 YMHAQPVSYPAARGPPVPSLQTQRYNVHENVR---PSFGHSARDA 965
Score = 63.2 bits (152), Expect(2) = 1e-25
Identities = 37/96 (38%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Frame = -3
Query: 598 RDYLSHGHYAPGLQQNG---YVYQPRGPHHVAQTPPIPAGAQFYQQGGYNNRGSFQSYGA 428
RDY HGH+ +QQNG Y P HV Q P +P F+QQ G+N S++ YGA
Sbjct: 1001 RDYRGHGHHIDRMQQNGGQNYSSHGSHPQHVGQIP-VPPTPNFHQQSGFNTSASYEPYGA 1059
Query: 427 TNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSA 320
+++ +S GGR R++ P GN FSA
Sbjct: 1060 GSFNQRS--GGRASHNQNVKGRNHPHPS--GNQFSA 1091
>XP_016550967.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X3 [Capsicum annuum]
XP_016550968.1 PREDICTED: 5'-3' exoribonuclease 3-like
isoform X3 [Capsicum annuum]
Length = 999
Score = 82.8 bits (203), Expect(2) = 1e-25
Identities = 45/105 (42%), Positives = 59/105 (56%), Gaps = 13/105 (12%)
Frame = -1
Query: 954 HEDSGRKPWENRRHNSQGSISGPHLGDAARRLVANSLQAKTERNGYGD------------ 811
HE+ +KPWEN R + +G++SG LG+AA RLV NSLQ K +R G+ D
Sbjct: 758 HEEHRKKPWENGRSHPRGAMSGRQLGEAAHRLVLNSLQKKEDRGGHDDYRRTHNGQGHSD 817
Query: 810 -QYAQPPSYAASRGPPYPSYQNNRHQGREQYRMAPPNAAHLAHSS 679
+AQP SY A+RGPP PS Q R+ E R P+ H A +
Sbjct: 818 YMHAQPVSYPAARGPPVPSLQTQRYNVHENVR---PSFGHSARDA 859
Score = 63.2 bits (152), Expect(2) = 1e-25
Identities = 37/96 (38%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Frame = -3
Query: 598 RDYLSHGHYAPGLQQNG---YVYQPRGPHHVAQTPPIPAGAQFYQQGGYNNRGSFQSYGA 428
RDY HGH+ +QQNG Y P HV Q P +P F+QQ G+N S++ YGA
Sbjct: 895 RDYRGHGHHIDRMQQNGGQNYSSHGSHPQHVGQIP-VPPTPNFHQQSGFNTSASYEPYGA 953
Query: 427 TNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSA 320
+++ +S GGR R++ P GN FSA
Sbjct: 954 GSFNQRS--GGRASHNQNVKGRNHPHPS--GNQFSA 985
>XP_009627640.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X1 [Nicotiana
tomentosiformis]
Length = 1083
Score = 78.6 bits (192), Expect(2) = 3e-25
Identities = 44/80 (55%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Frame = -1
Query: 954 HEDSGRKPWENRRHNSQGSISGPHLGDAARRLVANSLQAKTERNGYGD-QYAQPPSYAAS 778
HEDSGRKPWEN R+ G SG H+G+AA RLVANSLQ R+G+GD AQP +Y A+
Sbjct: 850 HEDSGRKPWENGRNQHPGGNSGRHVGEAAHRLVANSLQM---RSGHGDYARAQPAAYPAT 906
Query: 777 RGPPYPSYQNNRHQGREQYR 718
G P+PS ++R+ G+E R
Sbjct: 907 HG-PFPS--SHRYNGQEHVR 923
Score = 65.9 bits (159), Expect(2) = 3e-25
Identities = 44/108 (40%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Frame = -3
Query: 628 ERSELLTDQSRDYLSHGHYAPGLQQN---GYVYQPRGPHHVAQTPPIPAGAQFYQQ-GGY 461
ER S DY HGH++ + QN GY +V+QTP IP A F+QQ GY
Sbjct: 964 ERGGRPVPPSGDYHRHGHHSAVVTQNVGYGYSSHATRAQYVSQTP-IPPVAHFHQQQSGY 1022
Query: 460 NNRGSFQSYGATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSAL 317
+N S+Q Y A +Y+ GGG PQ + N +R Y P+ N FSAL
Sbjct: 1023 DNYTSYQPYVAGSYN--QLGGGWTPQGSQNVARGYSNPRPSSNHFSAL 1068
>XP_009627641.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X2 [Nicotiana
tomentosiformis]
Length = 973
Score = 78.6 bits (192), Expect(2) = 3e-25
Identities = 44/80 (55%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Frame = -1
Query: 954 HEDSGRKPWENRRHNSQGSISGPHLGDAARRLVANSLQAKTERNGYGD-QYAQPPSYAAS 778
HEDSGRKPWEN R+ G SG H+G+AA RLVANSLQ R+G+GD AQP +Y A+
Sbjct: 740 HEDSGRKPWENGRNQHPGGNSGRHVGEAAHRLVANSLQM---RSGHGDYARAQPAAYPAT 796
Query: 777 RGPPYPSYQNNRHQGREQYR 718
G P+PS ++R+ G+E R
Sbjct: 797 HG-PFPS--SHRYNGQEHVR 813
Score = 65.9 bits (159), Expect(2) = 3e-25
Identities = 44/108 (40%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Frame = -3
Query: 628 ERSELLTDQSRDYLSHGHYAPGLQQN---GYVYQPRGPHHVAQTPPIPAGAQFYQQ-GGY 461
ER S DY HGH++ + QN GY +V+QTP IP A F+QQ GY
Sbjct: 854 ERGGRPVPPSGDYHRHGHHSAVVTQNVGYGYSSHATRAQYVSQTP-IPPVAHFHQQQSGY 912
Query: 460 NNRGSFQSYGATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSAL 317
+N S+Q Y A +Y+ GGG PQ + N +R Y P+ N FSAL
Sbjct: 913 DNYTSYQPYVAGSYN--QLGGGWTPQGSQNVARGYSNPRPSSNHFSAL 958
>XP_018633777.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X3 [Nicotiana
tomentosiformis]
Length = 917
Score = 78.6 bits (192), Expect(2) = 3e-25
Identities = 44/80 (55%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Frame = -1
Query: 954 HEDSGRKPWENRRHNSQGSISGPHLGDAARRLVANSLQAKTERNGYGD-QYAQPPSYAAS 778
HEDSGRKPWEN R+ G SG H+G+AA RLVANSLQ R+G+GD AQP +Y A+
Sbjct: 684 HEDSGRKPWENGRNQHPGGNSGRHVGEAAHRLVANSLQM---RSGHGDYARAQPAAYPAT 740
Query: 777 RGPPYPSYQNNRHQGREQYR 718
G P+PS ++R+ G+E R
Sbjct: 741 HG-PFPS--SHRYNGQEHVR 757
Score = 65.9 bits (159), Expect(2) = 3e-25
Identities = 44/108 (40%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Frame = -3
Query: 628 ERSELLTDQSRDYLSHGHYAPGLQQN---GYVYQPRGPHHVAQTPPIPAGAQFYQQ-GGY 461
ER S DY HGH++ + QN GY +V+QTP IP A F+QQ GY
Sbjct: 798 ERGGRPVPPSGDYHRHGHHSAVVTQNVGYGYSSHATRAQYVSQTP-IPPVAHFHQQQSGY 856
Query: 460 NNRGSFQSYGATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSAL 317
+N S+Q Y A +Y+ GGG PQ + N +R Y P+ N FSAL
Sbjct: 857 DNYTSYQPYVAGSYN--QLGGGWTPQGSQNVARGYSNPRPSSNHFSAL 902
>XP_015162093.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X1 [Solanum
tuberosum]
Length = 1129
Score = 71.6 bits (174), Expect(2) = 7e-24
Identities = 45/125 (36%), Positives = 60/125 (48%), Gaps = 33/125 (26%)
Frame = -1
Query: 954 HEDSGRKPWENRRHNSQGSISGPH--------------------LGDAARRLVANSLQAK 835
HE S +KPWEN R+ +G++SG + LG+AA RLV NSLQ K
Sbjct: 878 HEQSSKKPWENGRNRHRGAMSGRNHHRDAMSGRNHHRGAMSGLQLGEAAHRLVVNSLQKK 937
Query: 834 TERNGYGD-------------QYAQPPSYAASRGPPYPSYQNNRHQGREQYRMAPPNAAH 694
+R G GD +AQP SY A+ GPP PS++ R+ E R P+ H
Sbjct: 938 EDRGGNGDHRRTHNGQGHGNYMHAQPASYHAAYGPPIPSFETPRNNVHENIR---PSFGH 994
Query: 693 LAHSS 679
A +
Sbjct: 995 SARDA 999
Score = 68.2 bits (165), Expect(2) = 7e-24
Identities = 40/98 (40%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Frame = -3
Query: 604 QSRDYLSHGHYAPGLQQNG---YVYQPRGPHHVAQTPPIPAGAQFYQQGGYNNRGSFQSY 434
+SRDY HGH+ G+QQNG + P HV Q P+P F+QQ GY+ S++
Sbjct: 1022 RSRDYRGHGHHTDGMQQNGAHSHSSYASHPQHVGQI-PVPPTTSFHQQSGYDASTSYEPR 1080
Query: 433 GATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSA 320
GA +Y+ + GGGR Q R Y P GN FSA
Sbjct: 1081 GAESYNQR--GGGRASQ--KQNGRGYHHPHPSGNQFSA 1114
>XP_015162094.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X2 [Solanum
tuberosum]
Length = 1125
Score = 71.6 bits (174), Expect(2) = 7e-24
Identities = 45/125 (36%), Positives = 60/125 (48%), Gaps = 33/125 (26%)
Frame = -1
Query: 954 HEDSGRKPWENRRHNSQGSISGPH--------------------LGDAARRLVANSLQAK 835
HE S +KPWEN R+ +G++SG + LG+AA RLV NSLQ K
Sbjct: 874 HEQSSKKPWENGRNRHRGAMSGRNHHRDAMSGRNHHRGAMSGLQLGEAAHRLVVNSLQKK 933
Query: 834 TERNGYGD-------------QYAQPPSYAASRGPPYPSYQNNRHQGREQYRMAPPNAAH 694
+R G GD +AQP SY A+ GPP PS++ R+ E R P+ H
Sbjct: 934 EDRGGNGDHRRTHNGQGHGNYMHAQPASYHAAYGPPIPSFETPRNNVHENIR---PSFGH 990
Query: 693 LAHSS 679
A +
Sbjct: 991 SARDA 995
Score = 68.2 bits (165), Expect(2) = 7e-24
Identities = 40/98 (40%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Frame = -3
Query: 604 QSRDYLSHGHYAPGLQQNG---YVYQPRGPHHVAQTPPIPAGAQFYQQGGYNNRGSFQSY 434
+SRDY HGH+ G+QQNG + P HV Q P+P F+QQ GY+ S++
Sbjct: 1018 RSRDYRGHGHHTDGMQQNGAHSHSSYASHPQHVGQI-PVPPTTSFHQQSGYDASTSYEPR 1076
Query: 433 GATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSA 320
GA +Y+ + GGGR Q R Y P GN FSA
Sbjct: 1077 GAESYNQR--GGGRASQ--KQNGRGYHHPHPSGNQFSA 1110
>XP_015162095.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X3 [Solanum
tuberosum]
Length = 1121
Score = 71.6 bits (174), Expect(2) = 7e-24
Identities = 45/125 (36%), Positives = 60/125 (48%), Gaps = 33/125 (26%)
Frame = -1
Query: 954 HEDSGRKPWENRRHNSQGSISGPH--------------------LGDAARRLVANSLQAK 835
HE S +KPWEN R+ +G++SG + LG+AA RLV NSLQ K
Sbjct: 870 HEQSSKKPWENGRNRHRGAMSGRNHHRDAMSGRNHHRGAMSGLQLGEAAHRLVVNSLQKK 929
Query: 834 TERNGYGD-------------QYAQPPSYAASRGPPYPSYQNNRHQGREQYRMAPPNAAH 694
+R G GD +AQP SY A+ GPP PS++ R+ E R P+ H
Sbjct: 930 EDRGGNGDHRRTHNGQGHGNYMHAQPASYHAAYGPPIPSFETPRNNVHENIR---PSFGH 986
Query: 693 LAHSS 679
A +
Sbjct: 987 SARDA 991
Score = 68.2 bits (165), Expect(2) = 7e-24
Identities = 40/98 (40%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Frame = -3
Query: 604 QSRDYLSHGHYAPGLQQNG---YVYQPRGPHHVAQTPPIPAGAQFYQQGGYNNRGSFQSY 434
+SRDY HGH+ G+QQNG + P HV Q P+P F+QQ GY+ S++
Sbjct: 1014 RSRDYRGHGHHTDGMQQNGAHSHSSYASHPQHVGQI-PVPPTTSFHQQSGYDASTSYEPR 1072
Query: 433 GATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSA 320
GA +Y+ + GGGR Q R Y P GN FSA
Sbjct: 1073 GAESYNQR--GGGRASQ--KQNGRGYHHPHPSGNQFSA 1106
>XP_015162096.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X4 [Solanum
tuberosum]
Length = 1019
Score = 71.6 bits (174), Expect(2) = 7e-24
Identities = 45/125 (36%), Positives = 60/125 (48%), Gaps = 33/125 (26%)
Frame = -1
Query: 954 HEDSGRKPWENRRHNSQGSISGPH--------------------LGDAARRLVANSLQAK 835
HE S +KPWEN R+ +G++SG + LG+AA RLV NSLQ K
Sbjct: 768 HEQSSKKPWENGRNRHRGAMSGRNHHRDAMSGRNHHRGAMSGLQLGEAAHRLVVNSLQKK 827
Query: 834 TERNGYGD-------------QYAQPPSYAASRGPPYPSYQNNRHQGREQYRMAPPNAAH 694
+R G GD +AQP SY A+ GPP PS++ R+ E R P+ H
Sbjct: 828 EDRGGNGDHRRTHNGQGHGNYMHAQPASYHAAYGPPIPSFETPRNNVHENIR---PSFGH 884
Query: 693 LAHSS 679
A +
Sbjct: 885 SARDA 889
Score = 68.2 bits (165), Expect(2) = 7e-24
Identities = 40/98 (40%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Frame = -3
Query: 604 QSRDYLSHGHYAPGLQQNG---YVYQPRGPHHVAQTPPIPAGAQFYQQGGYNNRGSFQSY 434
+SRDY HGH+ G+QQNG + P HV Q P+P F+QQ GY+ S++
Sbjct: 912 RSRDYRGHGHHTDGMQQNGAHSHSSYASHPQHVGQI-PVPPTTSFHQQSGYDASTSYEPR 970
Query: 433 GATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSA 320
GA +Y+ + GGGR Q R Y P GN FSA
Sbjct: 971 GAESYNQR--GGGRASQ--KQNGRGYHHPHPSGNQFSA 1004
>KVH96391.1 5'-3' exoribonuclease [Cynara cardunculus var. scolymus]
Length = 1026
Score = 83.2 bits (204), Expect(2) = 2e-23
Identities = 45/98 (45%), Positives = 58/98 (59%), Gaps = 7/98 (7%)
Frame = -1
Query: 954 HEDSGRKPWEN------RRHNSQGSISGPHLGDAARRLVANSLQAKTERNGYGDQYAQPP 793
HED+GRKPWEN R HN GS SG LGDAA RLV NSLQ K +RNG+ Y P
Sbjct: 806 HEDTGRKPWENGRNGHNRHHNPPGSASGRQLGDAAHRLVTNSLQLKNDRNGHHQAYDPHP 865
Query: 792 SYAASRGPPYPSYQNNR-HQGREQYRMAPPNAAHLAHS 682
+ PP+ YQ++R ++Q RM P +++ H+
Sbjct: 866 HHGPP--PPFRPYQSHRPPYNQDQSRMVQPRSSYPPHN 901
Score = 55.1 bits (131), Expect(2) = 2e-23
Identities = 42/95 (44%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Frame = -3
Query: 586 SHGHYAPGLQQNGYVY--QPRGPHHVAQTPPIPAGAQFYQQ--GGYNNRGSFQSYGATNY 419
S G + G QN +VY PRG H Q+P PA + +Y Q G YNN G +YGATN
Sbjct: 927 SGGRHTHGYHQNQHVYPPPPRGHH---QSPQPPASSSYYSQQGGAYNNSG---NYGATN- 979
Query: 418 HHQSSGGGRPPQANPNPSRDYGRPQQ-FGNTFSAL 317
HHQ G P+ R RPQ GN FSAL
Sbjct: 980 HHQPPTAGWAPRGG---GRGQVRPQHGGGNQFSAL 1011
>XP_017253271.1 PREDICTED: 5'-3' exoribonuclease 3-like [Daucus carota subsp.
sativus] KZM94234.1 hypothetical protein DCAR_017477
[Daucus carota subsp. sativus]
Length = 967
Score = 110 bits (274), Expect = 5e-23
Identities = 57/99 (57%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
Frame = -3
Query: 607 DQSRDYLSHGHYAPGLQQNGYVYQPRGPHHVAQT-PPIPAGAQFYQQGGYNNRGSFQSYG 431
DQSRDY +++ G QN +VYQPRGP H Q PPI AG FYQQ GY Q+YG
Sbjct: 862 DQSRDYPPQVYHSQGSHQNRHVYQPRGPLHAVQAPPPIAAGVPFYQQVGY------QAYG 915
Query: 430 ATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSALD 314
NYHHQ+ G PP NP RDYGR QQFGN FSALD
Sbjct: 916 GANYHHQNGG---PPTVNPRVGRDYGRHQQFGNQFSALD 951
Score = 108 bits (271), Expect = 1e-22
Identities = 52/83 (62%), Positives = 59/83 (71%)
Frame = -1
Query: 954 HEDSGRKPWENRRHNSQGSISGPHLGDAARRLVANSLQAKTERNGYGDQYAQPPSYAASR 775
HEDSGRKPWEN+R+N G+ISG LGDAA RLVANSLQ K +RN GD Y PP Y +
Sbjct: 737 HEDSGRKPWENKRNNPPGAISGRQLGDAAHRLVANSLQIKKDRNVDGDHYGHPP-YVTTH 795
Query: 774 GPPYPSYQNNRHQGREQYRMAPP 706
GP + Q RH G+EQYRM PP
Sbjct: 796 GPAFHPNQTLRHHGQEQYRMVPP 818
>CAN82967.1 hypothetical protein VITISV_021856 [Vitis vinifera]
Length = 500
Score = 106 bits (264), Expect = 5e-22
Identities = 51/84 (60%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Frame = -1
Query: 954 HEDSGRKPWENRRHNSQGSISGPHLGDAARRLVANSLQAKTERNGYGDQYAQPPSY-AAS 778
HED+GR+PWEN R N G+ISG LG+AA RLV NSLQ K ERNG+GDQ PP Y AA
Sbjct: 262 HEDNGRRPWENGRQNLPGTISGRQLGEAAHRLVVNSLQVKAERNGFGDQMHAPPPYPAAP 321
Query: 777 RGPPYPSYQNNRHQGREQYRMAPP 706
GPP SY +NR+ +E +RMA P
Sbjct: 322 YGPPLSSYSDNRYHNQEHHRMALP 345
Score = 75.9 bits (185), Expect = 1e-11
Identities = 48/103 (46%), Positives = 56/103 (54%), Gaps = 13/103 (12%)
Frame = -3
Query: 583 HGHYAPGLQQN-GYVYQPRGPHHVAQTPPIPAGAQFYQQGGYNNRGSFQSYGATNYHHQS 407
HG+Y PG QN G Y PR AQT IPAGA QGG+N+ +QSYGA++YH +
Sbjct: 390 HGYYQPGFHQNDGPGYHPR---QEAQTH-IPAGAXLPGQGGHNSHHGYQSYGASSYHEWA 445
Query: 406 SG------------GGRPPQANPNPSRDYGRPQQFGNTFSALD 314
SG G PQ NP R YG PQQ GN +S LD
Sbjct: 446 SGWPPEGNNQSNPRGHGHPQGNP---RGYGHPQQLGNQYSVLD 485