BLASTX nr result
ID: Panax25_contig00008105
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00008105
(456 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017246834.1 PREDICTED: H/ACA ribonucleoprotein complex subuni... 79 2e-14
XP_017214761.1 PREDICTED: H/ACA ribonucleoprotein complex subuni... 75 5e-13
KZV36375.1 H/ACA ribonucleoprotein complex subunit 4 [Dorcoceras... 74 2e-12
OMO59282.1 Pseudouridine synthase/archaeosine transglycosylase [... 73 3e-12
XP_012485499.1 PREDICTED: H/ACA ribonucleoprotein complex subuni... 73 4e-12
XP_011075203.1 PREDICTED: LOW QUALITY PROTEIN: H/ACA ribonucleop... 72 5e-12
XP_002270073.1 PREDICTED: H/ACA ribonucleoprotein complex subuni... 72 7e-12
KNA15312.1 hypothetical protein SOVF_099290 [Spinacia oleracea] 72 7e-12
XP_017611152.1 PREDICTED: H/ACA ribonucleoprotein complex subuni... 72 1e-11
XP_018831324.1 PREDICTED: H/ACA ribonucleoprotein complex subuni... 72 1e-11
XP_010685781.1 PREDICTED: H/ACA ribonucleoprotein complex subuni... 71 1e-11
OMO88041.1 Pseudouridine synthase/archaeosine transglycosylase [... 70 3e-11
XP_002308911.1 dyskerin family protein [Populus trichocarpa] EEE... 70 3e-11
KVH92643.1 Dyskerin-like protein [Cynara cardunculus var. scolymus] 70 5e-11
KHN26765.1 H/ACA ribonucleoprotein complex subunit 4 [Glycine soja] 68 5e-11
XP_018676580.1 PREDICTED: H/ACA ribonucleoprotein complex subuni... 70 5e-11
XP_009381980.1 PREDICTED: H/ACA ribonucleoprotein complex subuni... 70 5e-11
XP_002323264.2 dyskerin family protein [Populus trichocarpa] EEF... 69 6e-11
XP_007028578.2 PREDICTED: H/ACA ribonucleoprotein complex subuni... 69 6e-11
EOY09080.1 NAP57 isoform 2 [Theobroma cacao] 69 6e-11
>XP_017246834.1 PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Daucus
carota subsp. sativus] KZM98464.1 hypothetical protein
DCAR_014174 [Daucus carota subsp. sativus]
Length = 563
Score = 79.3 bits (194), Expect = 2e-14
Identities = 45/87 (51%), Positives = 50/87 (57%)
Frame = -1
Query: 456 GKLDKNGKPNENTPAEWMRNVALPPGGDSMIASLAAVTEPVSVRXXXXXXXXXXXXXXXX 277
GKLDK+GKPNE TPAEW+RNV LP GGDS++A L+AVTEPV
Sbjct: 386 GKLDKHGKPNEKTPAEWLRNVVLPTGGDSIVAGLSAVTEPVKAE--------------PI 431
Query: 276 XXXXXXXXXXXKRKLEDTDVSPATEHS 196
KRKLEDTD SPA E S
Sbjct: 432 EESDVKKKKKDKRKLEDTDSSPAPEVS 458
>XP_017214761.1 PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Daucus
carota subsp. sativus] KZM92417.1 hypothetical protein
DCAR_020218 [Daucus carota subsp. sativus]
Length = 615
Score = 75.5 bits (184), Expect = 5e-13
Identities = 43/87 (49%), Positives = 51/87 (58%)
Frame = -1
Query: 456 GKLDKNGKPNENTPAEWMRNVALPPGGDSMIASLAAVTEPVSVRXXXXXXXXXXXXXXXX 277
GKLDK+GKPNE+TPAEWMRNV P GGDS++ASLAA TE V+V+
Sbjct: 385 GKLDKHGKPNESTPAEWMRNVVYPTGGDSVVASLAAGTESVNVK-AEIPVEEVEKTKKKK 443
Query: 276 XXXXXXXXXXXKRKLEDTDVSPATEHS 196
KRKLE+ D S A EH+
Sbjct: 444 NKDRENEEDGRKRKLEEADASHAPEHT 470
>KZV36375.1 H/ACA ribonucleoprotein complex subunit 4 [Dorcoceras
hygrometricum]
Length = 597
Score = 73.6 bits (179), Expect = 2e-12
Identities = 32/40 (80%), Positives = 36/40 (90%)
Frame = -1
Query: 456 GKLDKNGKPNENTPAEWMRNVALPPGGDSMIASLAAVTEP 337
GKLDK+GKPNENTPAEW+RNV LP GGDS++ASLAA EP
Sbjct: 390 GKLDKHGKPNENTPAEWLRNVVLPSGGDSVVASLAAAAEP 429
>OMO59282.1 Pseudouridine synthase/archaeosine transglycosylase [Corchorus
olitorius]
Length = 587
Score = 73.2 bits (178), Expect = 3e-12
Identities = 32/40 (80%), Positives = 36/40 (90%)
Frame = -1
Query: 456 GKLDKNGKPNENTPAEWMRNVALPPGGDSMIASLAAVTEP 337
GKLDK+GKPNENTP EWMRNV LP GGD+M+ASLAA T+P
Sbjct: 391 GKLDKHGKPNENTPKEWMRNVVLPTGGDAMVASLAASTQP 430
>XP_012485499.1 PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Gossypium
raimondii] KJB35928.1 hypothetical protein
B456_006G134100 [Gossypium raimondii]
Length = 560
Score = 72.8 bits (177), Expect = 4e-12
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = -1
Query: 456 GKLDKNGKPNENTPAEWMRNVALPPGGDSMIASLAAVTEPVSV 328
GKLDK+GKPN++TP EW+RNVALP GGDSM+ASLAA EP +V
Sbjct: 391 GKLDKHGKPNDSTPKEWLRNVALPTGGDSMVASLAASAEPAAV 433
>XP_011075203.1 PREDICTED: LOW QUALITY PROTEIN: H/ACA ribonucleoprotein complex
subunit 4-like [Sesamum indicum]
Length = 602
Score = 72.4 bits (176), Expect = 5e-12
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = -1
Query: 456 GKLDKNGKPNENTPAEWMRNVALPPGGDSMIASLAAVTEP 337
GKLDK+GKPNENTPAEW RNV LP GGDS++ASLAA EP
Sbjct: 392 GKLDKHGKPNENTPAEWSRNVVLPTGGDSVVASLAAAAEP 431
>XP_002270073.1 PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Vitis
vinifera]
Length = 586
Score = 72.0 bits (175), Expect = 7e-12
Identities = 31/40 (77%), Positives = 36/40 (90%)
Frame = -1
Query: 456 GKLDKNGKPNENTPAEWMRNVALPPGGDSMIASLAAVTEP 337
GKL+K+GKPNENTP+EW+RNV LP GGDSM+ASLAA EP
Sbjct: 399 GKLNKHGKPNENTPSEWLRNVVLPTGGDSMVASLAAAVEP 438
>KNA15312.1 hypothetical protein SOVF_099290 [Spinacia oleracea]
Length = 587
Score = 72.0 bits (175), Expect = 7e-12
Identities = 41/85 (48%), Positives = 45/85 (52%)
Frame = -1
Query: 456 GKLDKNGKPNENTPAEWMRNVALPPGGDSMIASLAAVTEPVSVRXXXXXXXXXXXXXXXX 277
GKLDK+GKPNE TP EW RNV LP GGDSMIAS+AA EPV
Sbjct: 402 GKLDKHGKPNEQTPVEWARNVVLPTGGDSMIASIAASAEPVKA---------------DD 446
Query: 276 XXXXXXXXXXXKRKLEDTDVSPATE 202
KRKLE+ D SPA +
Sbjct: 447 VVVEEKKEKKHKRKLEEVDASPAAD 471
>XP_017611152.1 PREDICTED: H/ACA ribonucleoprotein complex subunit 4 isoform X1
[Gossypium arboreum] XP_017611153.1 PREDICTED: H/ACA
ribonucleoprotein complex subunit 4 isoform X2
[Gossypium arboreum]
Length = 559
Score = 71.6 bits (174), Expect = 1e-11
Identities = 32/43 (74%), Positives = 37/43 (86%)
Frame = -1
Query: 456 GKLDKNGKPNENTPAEWMRNVALPPGGDSMIASLAAVTEPVSV 328
GKLDK+GKPN++TP EW+RNVALP GGDSM+ASLAA EP V
Sbjct: 391 GKLDKHGKPNDSTPKEWLRNVALPTGGDSMVASLAASAEPAVV 433
>XP_018831324.1 PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Juglans
regia]
Length = 614
Score = 71.6 bits (174), Expect = 1e-11
Identities = 30/44 (68%), Positives = 37/44 (84%)
Frame = -1
Query: 456 GKLDKNGKPNENTPAEWMRNVALPPGGDSMIASLAAVTEPVSVR 325
GKLDK+GKPN+NTP EWMRN+ LP GGDS++A +AA TEP V+
Sbjct: 407 GKLDKHGKPNDNTPQEWMRNLVLPTGGDSVVAGIAAATEPAVVK 450
>XP_010685781.1 PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Beta vulgaris
subsp. vulgaris] KMT05263.1 hypothetical protein
BVRB_7g174020 [Beta vulgaris subsp. vulgaris]
Length = 570
Score = 71.2 bits (173), Expect = 1e-11
Identities = 40/85 (47%), Positives = 45/85 (52%)
Frame = -1
Query: 456 GKLDKNGKPNENTPAEWMRNVALPPGGDSMIASLAAVTEPVSVRXXXXXXXXXXXXXXXX 277
GKLDK+GKPNE TP EW RNV LP GGDSMIAS+AA +PV
Sbjct: 398 GKLDKHGKPNEKTPTEWARNVVLPTGGDSMIASIAASADPVKTE---------------E 442
Query: 276 XXXXXXXXXXXKRKLEDTDVSPATE 202
KRKLE+ D SPA +
Sbjct: 443 TVVEEKKEKKHKRKLEEVDASPAAD 467
>OMO88041.1 Pseudouridine synthase/archaeosine transglycosylase [Corchorus
capsularis]
Length = 583
Score = 70.5 bits (171), Expect = 3e-11
Identities = 31/39 (79%), Positives = 35/39 (89%)
Frame = -1
Query: 456 GKLDKNGKPNENTPAEWMRNVALPPGGDSMIASLAAVTE 340
GKLDK+GKPNENTP EWMRNV LP GGD+M+ASLAA T+
Sbjct: 391 GKLDKHGKPNENTPKEWMRNVVLPTGGDAMVASLAASTQ 429
>XP_002308911.1 dyskerin family protein [Populus trichocarpa] EEE92434.1 dyskerin
family protein [Populus trichocarpa]
Length = 593
Score = 70.5 bits (171), Expect = 3e-11
Identities = 32/42 (76%), Positives = 36/42 (85%), Gaps = 1/42 (2%)
Frame = -1
Query: 456 GKLDKNGKPNENTPAEWMRNVALPPGGDSMIASL-AAVTEPV 334
GKLDK+GKPNENTP EWMRN+ LPPGGDSM+A + AA EPV
Sbjct: 395 GKLDKHGKPNENTPHEWMRNLVLPPGGDSMVAGIAAAAAEPV 436
>KVH92643.1 Dyskerin-like protein [Cynara cardunculus var. scolymus]
Length = 570
Score = 69.7 bits (169), Expect = 5e-11
Identities = 34/45 (75%), Positives = 37/45 (82%), Gaps = 2/45 (4%)
Frame = -1
Query: 456 GKLDKNGKPNENTPAEWMRNVALPPGGDSMIASLAA--VTEPVSV 328
GKL K+GKPNE TPAEW RNV LPPGGDSM+ASLAA VTE V +
Sbjct: 397 GKLSKHGKPNEKTPAEWSRNVVLPPGGDSMVASLAAAPVTETVEL 441
>KHN26765.1 H/ACA ribonucleoprotein complex subunit 4 [Glycine soja]
Length = 230
Score = 68.2 bits (165), Expect = 5e-11
Identities = 30/40 (75%), Positives = 33/40 (82%)
Frame = -1
Query: 456 GKLDKNGKPNENTPAEWMRNVALPPGGDSMIASLAAVTEP 337
GKLDK+GKPNE TP EW+RN+ LP GGDSMIA LAA EP
Sbjct: 47 GKLDKHGKPNEKTPQEWLRNLVLPTGGDSMIAGLAAAPEP 86
>XP_018676580.1 PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like isoform
X2 [Musa acuminata subsp. malaccensis] XP_018676581.1
PREDICTED: H/ACA ribonucleoprotein complex subunit
4-like isoform X3 [Musa acuminata subsp. malaccensis]
Length = 630
Score = 69.7 bits (169), Expect = 5e-11
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = -1
Query: 456 GKLDKNGKPNENTPAEWMRNVALPPGGDSMIASLAAVTEPVSVR 325
G LDK+GKPNE TP+EW+RNV LP GGDSM+ASLAA EP V+
Sbjct: 403 GLLDKHGKPNEKTPSEWLRNVVLPTGGDSMVASLAAAPEPAVVQ 446
>XP_009381980.1 PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like isoform
X1 [Musa acuminata subsp. malaccensis]
Length = 641
Score = 69.7 bits (169), Expect = 5e-11
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = -1
Query: 456 GKLDKNGKPNENTPAEWMRNVALPPGGDSMIASLAAVTEPVSVR 325
G LDK+GKPNE TP+EW+RNV LP GGDSM+ASLAA EP V+
Sbjct: 414 GLLDKHGKPNEKTPSEWLRNVVLPTGGDSMVASLAAAPEPAVVQ 457
>XP_002323264.2 dyskerin family protein [Populus trichocarpa] EEF05025.2 dyskerin
family protein [Populus trichocarpa]
Length = 500
Score = 69.3 bits (168), Expect = 6e-11
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = -1
Query: 456 GKLDKNGKPNENTPAEWMRNVALPPGGDSMIASLAAVTEPV 334
GKLDK+GKPN+NTP EW RN+ LP GGDSM+A LAA EPV
Sbjct: 394 GKLDKHGKPNDNTPHEWARNLVLPAGGDSMVAGLAAAAEPV 434
>XP_007028578.2 PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Theobroma
cacao]
Length = 583
Score = 69.3 bits (168), Expect = 6e-11
Identities = 30/40 (75%), Positives = 35/40 (87%)
Frame = -1
Query: 456 GKLDKNGKPNENTPAEWMRNVALPPGGDSMIASLAAVTEP 337
GKLDK+GKPN++TP EW+RNV LP GGDSM+ASLAA EP
Sbjct: 391 GKLDKHGKPNDSTPKEWLRNVVLPAGGDSMVASLAASAEP 430
>EOY09080.1 NAP57 isoform 2 [Theobroma cacao]
Length = 583
Score = 69.3 bits (168), Expect = 6e-11
Identities = 30/40 (75%), Positives = 35/40 (87%)
Frame = -1
Query: 456 GKLDKNGKPNENTPAEWMRNVALPPGGDSMIASLAAVTEP 337
GKLDK+GKPN++TP EW+RNV LP GGDSM+ASLAA EP
Sbjct: 391 GKLDKHGKPNDSTPKEWLRNVVLPAGGDSMVASLAASAEP 430