BLASTX nr result

ID: Panax25_contig00007998 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00007998
         (521 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017254961.1 PREDICTED: pentatricopeptide repeat-containing pr...    77   4e-13
KZM89759.1 hypothetical protein DCAR_022878 [Daucus carota subsp...    77   4e-13

>XP_017254961.1 PREDICTED: pentatricopeptide repeat-containing protein At4g32450,
           mitochondrial-like [Daucus carota subsp. sativus]
          Length = 685

 Score = 76.6 bits (187), Expect = 4e-13
 Identities = 54/158 (34%), Positives = 64/158 (40%), Gaps = 1/158 (0%)
 Frame = +3

Query: 6   GEMSQSPSAFNKESLKDSGKSFGGNVDVRNSYGIGRKGAGEVQHKPNGFHGLGSSEANGS 185
           GE SQ PS FN            G+    N    G  GAG VQ + N F+G+GSSE N S
Sbjct: 138 GEFSQQPSGFN------------GSQSSLN----GVPGAGVVQQRQNQFYGVGSSEGNAS 181

Query: 186 YGQSTMHXXXXXXXXXXXXXXXFQHVSSNYQHLXXXXXXXXXXXXXXXS-SGYDGGNAGS 362
           YGQ  MH                 +      +                S + Y G  A +
Sbjct: 182 YGQHAMHSQWSSANHSVGNVNNVGNTQQGTNNFNGNNCYGNVVGSHQQSQNSYPGNYAEN 241

Query: 363 PNGYPSEKVGEYMQNPCVDYRPYAGPQQIPNEYQNGMG 476
            NG     VG Y   P V+YR  AGP  IPNEYQN +G
Sbjct: 242 FNGNLMRNVGGYQPTPSVEYRTNAGPLNIPNEYQNDIG 279


>KZM89759.1 hypothetical protein DCAR_022878 [Daucus carota subsp. sativus]
          Length = 712

 Score = 76.6 bits (187), Expect = 4e-13
 Identities = 54/158 (34%), Positives = 64/158 (40%), Gaps = 1/158 (0%)
 Frame = +3

Query: 6   GEMSQSPSAFNKESLKDSGKSFGGNVDVRNSYGIGRKGAGEVQHKPNGFHGLGSSEANGS 185
           GE SQ PS FN            G+    N    G  GAG VQ + N F+G+GSSE N S
Sbjct: 138 GEFSQQPSGFN------------GSQSSLN----GVPGAGVVQQRQNQFYGVGSSEGNAS 181

Query: 186 YGQSTMHXXXXXXXXXXXXXXXFQHVSSNYQHLXXXXXXXXXXXXXXXS-SGYDGGNAGS 362
           YGQ  MH                 +      +                S + Y G  A +
Sbjct: 182 YGQHAMHSQWSSANHSVGNVNNVGNTQQGTNNFNGNNCYGNVVGSHQQSQNSYPGNYAEN 241

Query: 363 PNGYPSEKVGEYMQNPCVDYRPYAGPQQIPNEYQNGMG 476
            NG     VG Y   P V+YR  AGP  IPNEYQN +G
Sbjct: 242 FNGNLMRNVGGYQPTPSVEYRTNAGPLNIPNEYQNDIG 279


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