BLASTX nr result

ID: Panax25_contig00007997 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00007997
         (540 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_011040710.1 PREDICTED: pentatricopeptide repeat-containing pr...    72   2e-11
XP_018851979.1 PREDICTED: pentatricopeptide repeat-containing pr...    70   8e-11
XP_006483319.1 PREDICTED: pentatricopeptide repeat-containing pr...    67   9e-10
XP_006450490.1 hypothetical protein CICLE_v10007521mg [Citrus cl...    67   9e-10
CAN80315.1 hypothetical protein VITISV_020760 [Vitis vinifera]         66   2e-09
CBI21005.3 unnamed protein product, partial [Vitis vinifera]           66   2e-09
XP_002282464.1 PREDICTED: pentatricopeptide repeat-containing pr...    66   2e-09
XP_010102722.1 hypothetical protein L484_015521 [Morus notabilis...    62   5e-08
XP_010252388.1 PREDICTED: pentatricopeptide repeat-containing pr...    60   2e-07
OAY61969.1 hypothetical protein MANES_01G231600 [Manihot esculenta]    56   5e-06

>XP_011040710.1 PREDICTED: pentatricopeptide repeat-containing protein At2g34370,
           mitochondrial-like [Populus euphratica]
          Length = 682

 Score = 71.6 bits (174), Expect = 2e-11
 Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 25/170 (14%)
 Frame = +2

Query: 2   EIPRNEIQNSPVGKNGSFSGVYDRGSTRTEFQQNPVGENWKLSNGYTRESPRNDFQHNPA 181
           E PRN++ N+P+GKNG+F+G +  G  R +FQQN  G +W+ S G        +  +N A
Sbjct: 87  ESPRNDLWNNPIGKNGNFTGFH--GKNRVDFQQNCDGASWERSRG--------EKHNNRA 136

Query: 182 GKNGGFNGYYGQNAG-------------------------ELSQSSSAFNKESLKDSGKF 286
            KNG F+GYY  N G                         +LS++   FN + L +S + 
Sbjct: 137 EKNGNFSGYYESNNGSSQQNYGWVGGQHGQSGYYGGHGNVQLSRNEPGFNSQGLSESQRS 196

Query: 287 SNGVFGGNVDVHNSYGIGRKGAGEVQHKTNGFHGQVSSEANGSNGQSTIH 436
            N  +  NV+  +            Q++ N + GQ          Q T++
Sbjct: 197 LNSNYPHNVEKFHHGPNDHYMVNGGQYQQNQYFGQYQQNQYFGQHQQTLN 246



 Score = 58.5 bits (140), Expect = 7e-07
 Identities = 44/151 (29%), Positives = 62/151 (41%), Gaps = 9/151 (5%)
 Frame = +2

Query: 98  QNPVGENWKLSNGYTRESPRNDFQHNPAGKNGGFNGYYGQNAGELSQSSSAFNKESLK-- 271
           +N  G N     G+ RESPRND  +NP GKNG F G++G+N  +  Q+    + E  +  
Sbjct: 72  ENSGGNNLNPDGGF-RESPRNDLWNNPIGKNGNFTGFHGKNRVDFQQNCDGASWERSRGE 130

Query: 272 --DSGKFSNGVFGGNVDVHNSYGIGRKGAGEVQHKTNGFHG-----QVSSEANGSNGQST 430
             ++    NG F G  + +N       G    QH  +G++G     Q+S    G N Q  
Sbjct: 131 KHNNRAEKNGNFSGYYESNNGSSQQNYGWVGGQHGQSGYYGGHGNVQLSRNEPGFNSQGL 190

Query: 431 IHXXXXXXXXXXXXXXXFQHVSSNYHGSTNG 523
                            F H   N H   NG
Sbjct: 191 SESQRSLNSNYPHNVEKFHH-GPNDHYMVNG 220


>XP_018851979.1 PREDICTED: pentatricopeptide repeat-containing protein At4g32450,
           mitochondrial [Juglans regia]
          Length = 779

 Score = 70.1 bits (170), Expect = 8e-11
 Identities = 48/147 (32%), Positives = 72/147 (48%), Gaps = 12/147 (8%)
 Frame = +2

Query: 11  RNEIQNSPVGKNGSFSGVYDRGSTRTEFQQN-----------PVGENWKLSNGYT-RESP 154
           R+  QN PVG+NG+FSG Y + S   +   N           P    +  +NG   +ES 
Sbjct: 149 RSTYQNHPVGQNGNFSGNYGQSSGWPQLDPNGISASNSRGFEPNSSGFHQNNGEVYKEST 208

Query: 155 RNDFQHNPAGKNGGFNGYYGQNAGELSQSSSAFNKESLKDSGKFSNGVFGGNVDVHNSYG 334
            N+ Q+N   +NG F+G+YG N G+  Q+ +     S       S G  G N ++ +SYG
Sbjct: 209 INESQNNQYQQNGNFSGHYGNNDGKFLQNHNGSYTHSSPVQHSMS-GFNGINRNLQHSYG 267

Query: 335 IGRKGAGEVQHKTNGFHGQVSSEANGS 415
              +GA   +   +GF+ Q  SE+ GS
Sbjct: 268 SYLEGARATRQNPHGFNSQGLSESQGS 294



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 38/125 (30%), Positives = 59/125 (47%)
 Frame = +2

Query: 2   EIPRNEIQNSPVGKNGSFSGVYDRGSTRTEFQQNPVGENWKLSNGYTRESPRNDFQHNPA 181
           E   N+   +PV +N SFSG Y  G    + QQN        S+G  RES R+ +Q++P 
Sbjct: 108 ESTTNDFVVNPVAQNESFSGPY--GQNYGDLQQN--------SSGLYRESYRSTYQNHPV 157

Query: 182 GKNGGFNGYYGQNAGELSQSSSAFNKESLKDSGKFSNGVFGGNVDVHNSYGIGRKGAGEV 361
           G+NG F+G YGQ++G      +  +  + +     S+G    N +V+    I      + 
Sbjct: 158 GQNGNFSGNYGQSSGWPQLDPNGISASNSRGFEPNSSGFHQNNGEVYKESTINESQNNQY 217

Query: 362 QHKTN 376
           Q   N
Sbjct: 218 QQNGN 222



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 13/112 (11%)
 Frame = +2

Query: 131 NGYTRESPRNDFQHNPAGKNGGFNGYYGQNAGELSQSSSAFNKESLKDSGK----FSNGV 298
           NG   ES  NDF  NP  +N  F+G YGQN G+L Q+SS   +ES + + +      NG 
Sbjct: 103 NGNCGESTTNDFVVNPVAQNESFSGPYGQNYGDLQQNSSGLYRESYRSTYQNHPVGQNGN 162

Query: 299 FGGNVDVHNSY------GIGRKGAGEVQHKTNGFH---GQVSSEANGSNGQS 427
           F GN    + +      GI    +   +  ++GFH   G+V  E+  +  Q+
Sbjct: 163 FSGNYGQSSGWPQLDPNGISASNSRGFEPNSSGFHQNNGEVYKESTINESQN 214


>XP_006483319.1 PREDICTED: pentatricopeptide repeat-containing protein At4g32450,
           mitochondrial [Citrus sinensis] KDO61674.1 hypothetical
           protein CISIN_1g004114mg [Citrus sinensis]
          Length = 773

 Score = 67.0 bits (162), Expect = 9e-10
 Identities = 49/147 (33%), Positives = 67/147 (45%), Gaps = 13/147 (8%)
 Frame = +2

Query: 14  NEIQNSPVGKNGSFSGVYDR-------------GSTRTEFQQNPVGENWKLSNGYTRESP 154
           +E Q + VG+NG+F G Y +             G +   FQQN   E ++   G   ES 
Sbjct: 143 SEQQRNIVGENGNFKGHYRQIDGYGKQNSNGIYGESSRGFQQNS-NEFYQHHAGVNSESH 201

Query: 155 RNDFQHNPAGKNGGFNGYYGQNAGELSQSSSAFNKESLKDSGKFSNGVFGGNVDVHNSYG 334
            N+FQ+N   +NG FN Y   N G+   + S    +  +          GGN +V N YG
Sbjct: 202 INEFQNNTFQQNGNFNDYGWYNNGQPHPNLSGAQPQMSRS---------GGNANVQNQYG 252

Query: 335 IGRKGAGEVQHKTNGFHGQVSSEANGS 415
               G GEV    NGF+ Q  SE+ GS
Sbjct: 253 PIHYGPGEVMQNRNGFNSQRFSESLGS 279


>XP_006450490.1 hypothetical protein CICLE_v10007521mg [Citrus clementina]
           ESR63730.1 hypothetical protein CICLE_v10007521mg
           [Citrus clementina]
          Length = 773

 Score = 67.0 bits (162), Expect = 9e-10
 Identities = 49/147 (33%), Positives = 67/147 (45%), Gaps = 13/147 (8%)
 Frame = +2

Query: 14  NEIQNSPVGKNGSFSGVYDR-------------GSTRTEFQQNPVGENWKLSNGYTRESP 154
           +E Q + VG+NG+F G Y +             G +   FQQN   E ++   G   ES 
Sbjct: 143 SEQQRNIVGENGNFKGHYRQIDGYGKQHSNGIYGESSRGFQQNS-NEFYQHHAGVNSESH 201

Query: 155 RNDFQHNPAGKNGGFNGYYGQNAGELSQSSSAFNKESLKDSGKFSNGVFGGNVDVHNSYG 334
            N+FQ+N   +NG FN Y   N G+   + S    +  +          GGN +V N YG
Sbjct: 202 INEFQNNTFQQNGNFNDYGWYNNGQPHPNLSGAQPQMSRS---------GGNANVQNQYG 252

Query: 335 IGRKGAGEVQHKTNGFHGQVSSEANGS 415
               G GEV    NGF+ Q  SE+ GS
Sbjct: 253 PIHYGPGEVMQNRNGFNSQRFSESLGS 279


>CAN80315.1 hypothetical protein VITISV_020760 [Vitis vinifera]
          Length = 1148

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 47/137 (34%), Positives = 63/137 (45%)
 Frame = +2

Query: 2   EIPRNEIQNSPVGKNGSFSGVYDRGSTRTEFQQNPVGENWKLSNGYTRESPRNDFQHNPA 181
           E  RNE + +P  ++G+FS  Y +GS      QN +           RES  N++Q N  
Sbjct: 177 EYARNEFEQNPFSQSGNFSRNYRQGSGGLPANQNEL----------CRESTINEYQQNLV 226

Query: 182 GKNGGFNGYYGQNAGELSQSSSAFNKESLKDSGKFSNGVFGGNVDVHNSYGIGRKGAGEV 361
           G++G  NGY GQN GE  Q S+ F               +G N +V NSY    +G  EV
Sbjct: 227 GQSGNINGYCGQNYGESLQKSNDF---------------YGQNRNVQNSY--YSEGRAEV 269

Query: 362 QHKTNGFHGQVSSEANG 412
               NG   Q+ SE  G
Sbjct: 270 NQNRNGNCQQIISETLG 286


>CBI21005.3 unnamed protein product, partial [Vitis vinifera]
          Length = 676

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 47/137 (34%), Positives = 63/137 (45%)
 Frame = +2

Query: 2   EIPRNEIQNSPVGKNGSFSGVYDRGSTRTEFQQNPVGENWKLSNGYTRESPRNDFQHNPA 181
           E  RNE + +P  ++G+FS  Y +GS      QN +           RES  N++Q N  
Sbjct: 177 EYARNEFKQNPFSQSGNFSRNYRQGSGGLPANQNEL----------CRESTINEYQQNLV 226

Query: 182 GKNGGFNGYYGQNAGELSQSSSAFNKESLKDSGKFSNGVFGGNVDVHNSYGIGRKGAGEV 361
           G++G  NGY GQN GE  Q S+ F               +G N +V NSY    +G  EV
Sbjct: 227 GQSGNINGYCGQNYGESLQKSNDF---------------YGQNRNVQNSY--YSEGRAEV 269

Query: 362 QHKTNGFHGQVSSEANG 412
               NG   Q+ SE  G
Sbjct: 270 NQNRNGNCQQIISETLG 286


>XP_002282464.1 PREDICTED: pentatricopeptide repeat-containing protein At4g32450,
           mitochondrial [Vitis vinifera]
          Length = 807

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 47/137 (34%), Positives = 63/137 (45%)
 Frame = +2

Query: 2   EIPRNEIQNSPVGKNGSFSGVYDRGSTRTEFQQNPVGENWKLSNGYTRESPRNDFQHNPA 181
           E  RNE + +P  ++G+FS  Y +GS      QN +           RES  N++Q N  
Sbjct: 177 EYARNEFKQNPFSQSGNFSRNYRQGSGGLPANQNEL----------CRESTINEYQQNLV 226

Query: 182 GKNGGFNGYYGQNAGELSQSSSAFNKESLKDSGKFSNGVFGGNVDVHNSYGIGRKGAGEV 361
           G++G  NGY GQN GE  Q S+ F               +G N +V NSY    +G  EV
Sbjct: 227 GQSGNINGYCGQNYGESLQKSNDF---------------YGQNRNVQNSY--YSEGRAEV 269

Query: 362 QHKTNGFHGQVSSEANG 412
               NG   Q+ SE  G
Sbjct: 270 NQNRNGNCQQIISETLG 286


>XP_010102722.1 hypothetical protein L484_015521 [Morus notabilis] EXB93974.1
           hypothetical protein L484_015521 [Morus notabilis]
          Length = 719

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
 Frame = +2

Query: 11  RNEIQNSPVGKNGSFSGVYDRGSTRTEFQQNPVGENWKLSNGYTRESPRNDFQHNPAGKN 190
           R++   S   +NG++ GVY  G +    QQN  G     S G+  E+  N   +N  GKN
Sbjct: 126 RSQSHESDFSQNGNYGGVY--GQSNNNLQQNSNGVYQNDSGGHF-ENSSNTSVNNSNGKN 182

Query: 191 GGFNGYYGQNAGELSQSSSAFNKESLKDSGKFSNGVFGGNVDVHNSYGIGRKGAGEV-QH 367
           G F+GYYGQ+ G L Q+S+              N  +GGN ++ N Y   +  A E+ Q 
Sbjct: 183 GNFSGYYGQSNGVLQQNSN-------------PNREYGGNWNMQNIYDSYQGRAVEMKQQ 229

Query: 368 KTNGFHGQVSSEANGS 415
             +GF  Q  S   G+
Sbjct: 230 NPSGFSSQGISGVEGN 245


>XP_010252388.1 PREDICTED: pentatricopeptide repeat-containing protein At4g32450,
           mitochondrial-like [Nelumbo nucifera]
          Length = 732

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
 Frame = +2

Query: 131 NGYTRESPRND-FQHNPAGKNGGFNGYYGQNAGELSQSSSAFNKESLKDSGKFSNGVFGG 307
           NG+ RE+PR + FQ NP  +N  FNG+Y ++  +L+ + + F  +S     +  +G +G 
Sbjct: 177 NGFYRENPREEEFQPNPVEQNKNFNGFYRKDFQQLATNPTGFYSKSSNTLQQGPSGYYGQ 236

Query: 308 NVDVHNSYGIGRKGAGEVQHKTNGFHGQVSSEANGSNGQS 427
           N    N +G  R+   E Q K  GF+    S   GS G S
Sbjct: 237 NNYQQNLHGSRREDVRETQQKPTGFYQGSPSTYQGSGGPS 276


>OAY61969.1 hypothetical protein MANES_01G231600 [Manihot esculenta]
          Length = 716

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 43/129 (33%), Positives = 58/129 (44%)
 Frame = +2

Query: 14  NEIQNSPVGKNGSFSGVYDRGSTRTEFQQNPVGENWKLSNGYTRESPRNDFQHNPAGKNG 193
           N + N  V +NG+  G Y  G     F  N  G+  +  N  + ES RN  Q+NP  + G
Sbjct: 100 NFVGNIQVAQNGNPDGSY--GQNHGNFPHNLNGD-CQNCNWTSWESIRNVNQNNPNERRG 156

Query: 194 GFNGYYGQNAGELSQSSSAFNKESLKDSGKFSNGVFGGNVDVHNSYGIGRKGAGEVQHKT 373
            F+GYY  N+G+     S     + K S      V GG+  V N +   +KG GEV    
Sbjct: 157 NFSGYY-VNSGQFQHKRSEVAASNSKSSQDHLKRVNGGSGKVPNVHAYSQKGPGEVTQNP 215

Query: 374 NGFHGQVSS 400
              H QV S
Sbjct: 216 AALHLQVPS 224


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