BLASTX nr result
ID: Panax25_contig00007592
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00007592
(461 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_018836940.1 PREDICTED: DNA-directed RNA polymerase III subuni... 78 7e-15
XP_015080913.1 PREDICTED: DNA-directed RNA polymerase III subuni... 76 3e-14
XP_010323226.1 PREDICTED: DNA-directed RNA polymerase III subuni... 76 3e-14
XP_019175812.1 PREDICTED: DNA-directed RNA polymerase III subuni... 74 7e-14
OAY61593.1 hypothetical protein MANES_01G201400 [Manihot esculenta] 75 7e-14
KJB11156.1 hypothetical protein B456_001G243200 [Gossypium raimo... 74 1e-13
XP_017977600.1 PREDICTED: DNA-directed RNA polymerase III subuni... 74 1e-13
XP_019175810.1 PREDICTED: DNA-directed RNA polymerase III subuni... 74 1e-13
XP_015080916.1 PREDICTED: DNA-directed RNA polymerase III subuni... 74 2e-13
XP_004242644.1 PREDICTED: DNA-directed RNA polymerase III subuni... 74 2e-13
XP_016746746.1 PREDICTED: DNA-directed RNA polymerase III subuni... 74 2e-13
XP_016724977.1 PREDICTED: DNA-directed RNA polymerase III subuni... 74 2e-13
XP_012441685.1 PREDICTED: DNA-directed RNA polymerase III subuni... 74 2e-13
XP_017623014.1 PREDICTED: DNA-directed RNA polymerase III subuni... 74 2e-13
XP_006343568.1 PREDICTED: DNA-directed RNA polymerase III subuni... 74 2e-13
KDO68537.1 hypothetical protein CISIN_1g029495mg [Citrus sinensis] 72 3e-13
XP_009600427.1 PREDICTED: DNA-directed RNA polymerase III subuni... 73 4e-13
KVH89192.1 RNA polymerase III, subunit Rpc25 [Cynara cardunculus... 73 4e-13
XP_017241188.1 PREDICTED: DNA-directed RNA polymerase III subuni... 73 5e-13
XP_016554720.1 PREDICTED: DNA-directed RNA polymerase III subuni... 72 5e-13
>XP_018836940.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Juglans
regia]
Length = 201
Score = 77.8 bits (190), Expect = 7e-15
Identities = 38/47 (80%), Positives = 41/47 (87%)
Frame = -3
Query: 459 FIFPSDGASTYTVKFRLIVFRPFAGEVIAAKLKESNATGLRCITTYF 319
FIFPSDGA+TYTV FRLI+FRPF GEVIAAKLKESNATGLR +F
Sbjct: 58 FIFPSDGAATYTVVFRLIMFRPFVGEVIAAKLKESNATGLRLSLGFF 104
>XP_015080913.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X1
[Solanum pennellii] XP_015080914.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC8 isoform X1
[Solanum pennellii] XP_015080915.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC8 isoform X1
[Solanum pennellii]
Length = 199
Score = 76.3 bits (186), Expect = 3e-14
Identities = 35/42 (83%), Positives = 39/42 (92%)
Frame = -3
Query: 459 FIFPSDGASTYTVKFRLIVFRPFAGEVIAAKLKESNATGLRC 334
FI+PS+GASTY VKFRL+VFRPF GEVI+AKLKESNA GLRC
Sbjct: 58 FIYPSEGASTYKVKFRLVVFRPFVGEVISAKLKESNAEGLRC 99
>XP_010323226.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X1
[Solanum lycopersicum]
Length = 199
Score = 76.3 bits (186), Expect = 3e-14
Identities = 35/42 (83%), Positives = 39/42 (92%)
Frame = -3
Query: 459 FIFPSDGASTYTVKFRLIVFRPFAGEVIAAKLKESNATGLRC 334
FI+PS+GASTY VKFRL+VFRPF GEVI+AKLKESNA GLRC
Sbjct: 58 FIYPSEGASTYKVKFRLVVFRPFVGEVISAKLKESNAEGLRC 99
>XP_019175812.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
isoform X2 [Ipomoea nil]
Length = 163
Score = 74.3 bits (181), Expect = 7e-14
Identities = 36/47 (76%), Positives = 39/47 (82%)
Frame = -3
Query: 459 FIFPSDGASTYTVKFRLIVFRPFAGEVIAAKLKESNATGLRCITTYF 319
FIF DGASTYTVKFRLI+FRPF GEVIAA+LKESNA GLR +F
Sbjct: 58 FIFAGDGASTYTVKFRLIIFRPFRGEVIAARLKESNANGLRLSLGFF 104
>OAY61593.1 hypothetical protein MANES_01G201400 [Manihot esculenta]
Length = 201
Score = 75.1 bits (183), Expect = 7e-14
Identities = 38/78 (48%), Positives = 51/78 (65%)
Frame = -3
Query: 459 FIFPSDGASTYTVKFRLIVFRPFAGEVIAAKLKESNATGLRCITTYFFAYGIINCFLKLI 280
FIFP DGASTY V+FR++VFRPF GE+IAAKLKESN GLRC+ F L L
Sbjct: 58 FIFPGDGASTYVVEFRMVVFRPFVGEIIAAKLKESNKDGLRCMFNEDFT-------LSLG 110
Query: 279 SYGDVTIMTYIISSCSVF 226
+ D+ + + + + S++
Sbjct: 111 FFDDIYVPAHRLPNPSIY 128
>KJB11156.1 hypothetical protein B456_001G243200 [Gossypium raimondii]
Length = 167
Score = 73.9 bits (180), Expect = 1e-13
Identities = 35/47 (74%), Positives = 40/47 (85%)
Frame = -3
Query: 459 FIFPSDGASTYTVKFRLIVFRPFAGEVIAAKLKESNATGLRCITTYF 319
FIFP DGASTYTV+FRLIVFRPF GE+I AKLKES+A+GLR +F
Sbjct: 58 FIFPGDGASTYTVEFRLIVFRPFIGEIIVAKLKESDASGLRLSLGFF 104
>XP_017977600.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X2
[Theobroma cacao]
Length = 187
Score = 74.3 bits (181), Expect = 1e-13
Identities = 35/45 (77%), Positives = 39/45 (86%)
Frame = -3
Query: 459 FIFPSDGASTYTVKFRLIVFRPFAGEVIAAKLKESNATGLRCITT 325
FI+P DGASTYTV+FRLIVFRPF GE+I AKLKES+A GLR I T
Sbjct: 77 FIYPGDGASTYTVEFRLIVFRPFVGEIIVAKLKESDANGLRYIVT 121
>XP_019175810.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
isoform X1 [Ipomoea nil] XP_019175811.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC8-like
isoform X1 [Ipomoea nil]
Length = 193
Score = 74.3 bits (181), Expect = 1e-13
Identities = 36/47 (76%), Positives = 39/47 (82%)
Frame = -3
Query: 459 FIFPSDGASTYTVKFRLIVFRPFAGEVIAAKLKESNATGLRCITTYF 319
FIF DGASTYTVKFRLI+FRPF GEVIAA+LKESNA GLR +F
Sbjct: 58 FIFAGDGASTYTVKFRLIIFRPFRGEVIAARLKESNANGLRLSLGFF 104
>XP_015080916.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X2
[Solanum pennellii]
Length = 193
Score = 73.9 bits (180), Expect = 2e-13
Identities = 35/47 (74%), Positives = 40/47 (85%)
Frame = -3
Query: 459 FIFPSDGASTYTVKFRLIVFRPFAGEVIAAKLKESNATGLRCITTYF 319
FI+PS+GASTY VKFRL+VFRPF GEVI+AKLKESNA GLR +F
Sbjct: 58 FIYPSEGASTYKVKFRLVVFRPFVGEVISAKLKESNAEGLRLSLGFF 104
>XP_004242644.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X2
[Solanum lycopersicum]
Length = 193
Score = 73.9 bits (180), Expect = 2e-13
Identities = 35/47 (74%), Positives = 40/47 (85%)
Frame = -3
Query: 459 FIFPSDGASTYTVKFRLIVFRPFAGEVIAAKLKESNATGLRCITTYF 319
FI+PS+GASTY VKFRL+VFRPF GEVI+AKLKESNA GLR +F
Sbjct: 58 FIYPSEGASTYKVKFRLVVFRPFVGEVISAKLKESNAEGLRLSLGFF 104
>XP_016746746.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
[Gossypium hirsutum] XP_016746747.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC8-like
[Gossypium hirsutum] XP_016746748.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC8-like
[Gossypium hirsutum] XP_016746749.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC8-like
[Gossypium hirsutum] XP_016746750.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC8-like
[Gossypium hirsutum] XP_016746751.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC8-like
[Gossypium hirsutum] XP_016746752.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC8-like
[Gossypium hirsutum] XP_016746753.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC8-like
[Gossypium hirsutum]
Length = 210
Score = 73.9 bits (180), Expect = 2e-13
Identities = 35/47 (74%), Positives = 40/47 (85%)
Frame = -3
Query: 459 FIFPSDGASTYTVKFRLIVFRPFAGEVIAAKLKESNATGLRCITTYF 319
FIFP DGASTYTV+FRLIVFRPF GE+I AKLKES+A+GLR +F
Sbjct: 58 FIFPGDGASTYTVEFRLIVFRPFIGEIIVAKLKESDASGLRLSLGFF 104
>XP_016724977.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
[Gossypium hirsutum] XP_016724979.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC8-like
[Gossypium hirsutum] XP_016724980.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC8-like
[Gossypium hirsutum] XP_016724981.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC8-like
[Gossypium hirsutum] XP_016724982.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC8-like
[Gossypium hirsutum] XP_016724983.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC8-like
[Gossypium hirsutum] XP_016724984.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC8-like
[Gossypium hirsutum]
Length = 210
Score = 73.9 bits (180), Expect = 2e-13
Identities = 35/47 (74%), Positives = 40/47 (85%)
Frame = -3
Query: 459 FIFPSDGASTYTVKFRLIVFRPFAGEVIAAKLKESNATGLRCITTYF 319
FIFP DGASTYTV+FRLIVFRPF GE+I AKLKES+A+GLR +F
Sbjct: 58 FIFPGDGASTYTVEFRLIVFRPFIGEIIVAKLKESDASGLRLSLGFF 104
>XP_012441685.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Gossypium
raimondii] XP_012441693.1 PREDICTED: DNA-directed RNA
polymerase III subunit RPC8 [Gossypium raimondii]
XP_012441701.1 PREDICTED: DNA-directed RNA polymerase
III subunit RPC8 [Gossypium raimondii] XP_012441706.1
PREDICTED: DNA-directed RNA polymerase III subunit RPC8
[Gossypium raimondii] XP_012441707.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC8 [Gossypium
raimondii] XP_012441713.1 PREDICTED: DNA-directed RNA
polymerase III subunit RPC8 [Gossypium raimondii]
XP_012441721.1 PREDICTED: DNA-directed RNA polymerase
III subunit RPC8 [Gossypium raimondii] XP_012441727.1
PREDICTED: DNA-directed RNA polymerase III subunit RPC8
[Gossypium raimondii] XP_012441736.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC8 [Gossypium
raimondii] KJB11149.1 hypothetical protein
B456_001G243200 [Gossypium raimondii] KJB11150.1
hypothetical protein B456_001G243200 [Gossypium
raimondii] KJB11151.1 hypothetical protein
B456_001G243200 [Gossypium raimondii] KJB11152.1
hypothetical protein B456_001G243200 [Gossypium
raimondii] KJB11153.1 hypothetical protein
B456_001G243200 [Gossypium raimondii] KJB11154.1
hypothetical protein B456_001G243200 [Gossypium
raimondii] KJB11155.1 hypothetical protein
B456_001G243200 [Gossypium raimondii]
Length = 210
Score = 73.9 bits (180), Expect = 2e-13
Identities = 35/47 (74%), Positives = 40/47 (85%)
Frame = -3
Query: 459 FIFPSDGASTYTVKFRLIVFRPFAGEVIAAKLKESNATGLRCITTYF 319
FIFP DGASTYTV+FRLIVFRPF GE+I AKLKES+A+GLR +F
Sbjct: 58 FIFPGDGASTYTVEFRLIVFRPFIGEIIVAKLKESDASGLRLSLGFF 104
>XP_017623014.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Gossypium
arboreum] XP_017623023.1 PREDICTED: DNA-directed RNA
polymerase III subunit RPC8 [Gossypium arboreum]
XP_017623033.1 PREDICTED: DNA-directed RNA polymerase
III subunit RPC8 [Gossypium arboreum] XP_017623043.1
PREDICTED: DNA-directed RNA polymerase III subunit RPC8
[Gossypium arboreum] XP_017623051.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC8 [Gossypium
arboreum] XP_017623060.1 PREDICTED: DNA-directed RNA
polymerase III subunit RPC8 [Gossypium arboreum]
XP_017623067.1 PREDICTED: DNA-directed RNA polymerase
III subunit RPC8 [Gossypium arboreum] XP_017623076.1
PREDICTED: DNA-directed RNA polymerase III subunit RPC8
[Gossypium arboreum] KHG16616.1 DNA-directed RNA
polymerase III subunit RPC8 [Gossypium arboreum]
Length = 210
Score = 73.9 bits (180), Expect = 2e-13
Identities = 35/47 (74%), Positives = 40/47 (85%)
Frame = -3
Query: 459 FIFPSDGASTYTVKFRLIVFRPFAGEVIAAKLKESNATGLRCITTYF 319
FIFP DGASTYTV+FRLIVFRPF GE+I AKLKES+A+GLR +F
Sbjct: 58 FIFPGDGASTYTVEFRLIVFRPFIGEIIVAKLKESDASGLRLSLGFF 104
>XP_006343568.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Solanum
tuberosum] XP_015162524.1 PREDICTED: DNA-directed RNA
polymerase III subunit RPC8 [Solanum tuberosum]
XP_015162525.1 PREDICTED: DNA-directed RNA polymerase
III subunit RPC8 [Solanum tuberosum]
Length = 193
Score = 73.6 bits (179), Expect = 2e-13
Identities = 35/47 (74%), Positives = 39/47 (82%)
Frame = -3
Query: 459 FIFPSDGASTYTVKFRLIVFRPFAGEVIAAKLKESNATGLRCITTYF 319
FI+PS+GASTYTVKFRL+VFRPF GEVI AKLKES A GLR +F
Sbjct: 58 FIYPSEGASTYTVKFRLVVFRPFVGEVITAKLKESKAEGLRLSLGFF 104
>KDO68537.1 hypothetical protein CISIN_1g029495mg [Citrus sinensis]
Length = 129
Score = 71.6 bits (174), Expect = 3e-13
Identities = 32/47 (68%), Positives = 40/47 (85%)
Frame = -3
Query: 459 FIFPSDGASTYTVKFRLIVFRPFAGEVIAAKLKESNATGLRCITTYF 319
F++P +GAST+TVKFRL+VFRPF GE+IAAKLKES+A GLR +F
Sbjct: 58 FVYPGEGASTHTVKFRLVVFRPFVGEIIAAKLKESDANGLRLSLGFF 104
>XP_009600427.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Nicotiana
tomentosiformis] XP_016489416.1 PREDICTED: DNA-directed
RNA polymerase III subunit RPC8-like [Nicotiana tabacum]
XP_016489417.1 PREDICTED: DNA-directed RNA polymerase
III subunit RPC8-like [Nicotiana tabacum] XP_018626314.1
PREDICTED: DNA-directed RNA polymerase III subunit RPC8
[Nicotiana tomentosiformis]
Length = 194
Score = 73.2 bits (178), Expect = 4e-13
Identities = 36/47 (76%), Positives = 39/47 (82%)
Frame = -3
Query: 459 FIFPSDGASTYTVKFRLIVFRPFAGEVIAAKLKESNATGLRCITTYF 319
FI+ +GASTYTVKFRLIVFRPF GEVIAAKLKESNA GLR +F
Sbjct: 58 FIYAGEGASTYTVKFRLIVFRPFVGEVIAAKLKESNAEGLRLSLGFF 104
>KVH89192.1 RNA polymerase III, subunit Rpc25 [Cynara cardunculus var.
scolymus]
Length = 184
Score = 72.8 bits (177), Expect = 4e-13
Identities = 33/41 (80%), Positives = 38/41 (92%)
Frame = -3
Query: 459 FIFPSDGASTYTVKFRLIVFRPFAGEVIAAKLKESNATGLR 337
FIFP++GA TYTVKFRLI+FRPF GE+I+AKLKESNA GLR
Sbjct: 83 FIFPNEGAPTYTVKFRLIIFRPFVGEIISAKLKESNADGLR 123
>XP_017241188.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Daucus
carota subsp. sativus]
Length = 193
Score = 72.8 bits (177), Expect = 5e-13
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = -3
Query: 459 FIFPSDGASTYTVKFRLIVFRPFAGEVIAAKLKESNATGLRCITTYF 319
F+FPSDGASTYTVKFRL+VFRPF GEVI+AKL ES GLR +F
Sbjct: 58 FVFPSDGASTYTVKFRLVVFRPFVGEVISAKLSESTINGLRLSLGFF 104
>XP_016554720.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X2
[Capsicum annuum]
Length = 181
Score = 72.4 bits (176), Expect = 5e-13
Identities = 34/47 (72%), Positives = 39/47 (82%)
Frame = -3
Query: 459 FIFPSDGASTYTVKFRLIVFRPFAGEVIAAKLKESNATGLRCITTYF 319
FI+PS+GASTYTVKFRL+VFRPF GEVI A+LKES A GLR +F
Sbjct: 58 FIYPSEGASTYTVKFRLVVFRPFVGEVITARLKESTAEGLRLSLGFF 104