BLASTX nr result

ID: Panax25_contig00007232 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00007232
         (586 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

JAU16833.1 Tubulin beta-3 chain, partial [Noccaea caerulescens] ...    87   6e-19
BAP46431.1 tublin, partial [Iris lactea var. lactea]                   87   8e-19
AHH02827.1 beta-tubulin, partial [Trifolium repens]                    87   2e-18
APT35299.1 beta-tubulin subunit, partial [Amaranthus tuberculatus]     84   2e-18
AGQ43300.1 TUBB3, partial [Oryza nivara] AGQ43301.1 TUBB3, parti...    87   3e-18
AEX11070.1 hypothetical protein 0_11649_01, partial [Pinus taeda...    87   3e-18
APT35300.1 beta-tubulin subunit, partial [Amaranthus tuberculatus]     84   4e-18
AEW07474.1 hypothetical protein 0_2321_02, partial [Pinus lamber...    87   4e-18
JAU26293.1 Tubulin beta-8 chain, partial [Noccaea caerulescens] ...    87   5e-18
CEO92151.1 beta-tubulin, partial [Camelina sp. CameTUB9]               87   5e-18
CEO92148.1 beta-tubulin, partial [Camelina sp. CameTUB6]               87   5e-18
CEO92147.1 beta-tubulin, partial [Camelina sp. CameTUB5]               87   5e-18
CEO92141.1 beta-tubulin, partial [Camelina laxa]                       87   5e-18
CEO92140.1 beta-tubulin, partial [Camelina laxa]                       87   5e-18
CEO92138.1 beta-tubulin, partial [Camelina laxa]                       87   5e-18
CEO92132.1 beta-tubulin, partial [Camelina laxa]                       87   5e-18
CEO92131.1 beta-tubulin, partial [Camelina hispida]                    87   5e-18
CEO92130.1 beta-tubulin, partial [Camelina hispida]                    87   5e-18
CEO92129.1 beta-tubulin, partial [Camelina hispida]                    87   5e-18
CEO92128.1 beta-tubulin, partial [Camelina hispida]                    87   5e-18

>JAU16833.1 Tubulin beta-3 chain, partial [Noccaea caerulescens] JAU50828.1
           Tubulin beta-3 chain, partial [Noccaea caerulescens]
           JAU57411.1 Tubulin beta-3 chain, partial [Noccaea
           caerulescens] JAU93296.1 Tubulin beta-3 chain, partial
           [Noccaea caerulescens]
          Length = 90

 Score = 86.7 bits (213), Expect = 6e-19
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = -2

Query: 117 GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 1
           GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG
Sbjct: 34  GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 72


>BAP46431.1 tublin, partial [Iris lactea var. lactea]
          Length = 99

 Score = 86.7 bits (213), Expect = 8e-19
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = -2

Query: 117 GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 1
           GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG
Sbjct: 37  GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 75


>AHH02827.1 beta-tubulin, partial [Trifolium repens]
          Length = 126

 Score = 86.7 bits (213), Expect = 2e-18
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = -2

Query: 117 GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 1
           GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG
Sbjct: 63  GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 101


>APT35299.1 beta-tubulin subunit, partial [Amaranthus tuberculatus]
          Length = 52

 Score = 84.3 bits (207), Expect = 2e-18
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = -2

Query: 117 GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGG 4
           GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGG
Sbjct: 15  GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGG 52


>AGQ43300.1 TUBB3, partial [Oryza nivara] AGQ43301.1 TUBB3, partial [Oryza
           rufipogon] AGQ43302.1 TUBB3, partial [Oryza glumipatula]
           AGQ43303.1 TUBB3, partial [Oryza longistaminata]
           AGQ43304.1 TUBB3, partial [Oryza barthii] AGQ43305.1
           TUBB3, partial [Oryza meridionalis] AGQ43306.1 TUBB3,
           partial [Oryza glaberrima] AGQ43307.1 TUBB3, partial
           [Oryza sativa Indica Group] AGQ43308.1 TUBB3, partial
           [Oryza sativa Japonica Group] AGQ43309.1 TUBB3, partial
           [Oryza punctata] AGQ43310.1 TUBB3, partial [Oryza
           officinalis] AGQ43311.1 TUBB3, partial [Oryza
           australiensis]
          Length = 145

 Score = 86.7 bits (213), Expect = 3e-18
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = -2

Query: 117 GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 1
           GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG
Sbjct: 104 GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 142


>AEX11070.1 hypothetical protein 0_11649_01, partial [Pinus taeda] AEX11071.1
           hypothetical protein 0_11649_01, partial [Pinus taeda]
           AEX11072.1 hypothetical protein 0_11649_01, partial
           [Pinus taeda] AEX11073.1 hypothetical protein
           0_11649_01, partial [Pinus taeda] AEX11074.1
           hypothetical protein 0_11649_01, partial [Pinus taeda]
           AEX11075.1 hypothetical protein 0_11649_01, partial
           [Pinus taeda] AEX11076.1 hypothetical protein
           0_11649_01, partial [Pinus taeda] AEX11077.1
           hypothetical protein 0_11649_01, partial [Pinus taeda]
           AEX11078.1 hypothetical protein 0_11649_01, partial
           [Pinus taeda] AEX11079.1 hypothetical protein
           0_11649_01, partial [Pinus taeda] AEX11080.1
           hypothetical protein 0_11649_01, partial [Pinus taeda]
           AEX11081.1 hypothetical protein 0_11649_01, partial
           [Pinus taeda] AEX11082.1 hypothetical protein
           0_11649_01, partial [Pinus taeda] AEX11083.1
           hypothetical protein 0_11649_01, partial [Pinus taeda]
           AEX11084.1 hypothetical protein 0_11649_01, partial
           [Pinus taeda] AEX11085.1 hypothetical protein
           0_11649_01, partial [Pinus taeda] AEX11086.1
           hypothetical protein 0_11649_01, partial [Pinus taeda]
           AEX11087.1 hypothetical protein 0_11649_01, partial
           [Pinus taeda] AEX11088.1 hypothetical protein
           0_11649_01, partial [Pinus radiata] AEX11089.1
           hypothetical protein 0_11649_01, partial [Pinus
           lambertiana] AFB32277.1 hypothetical protein 0_11649_01,
           partial [Pinus cembra] AFB32278.1 hypothetical protein
           0_11649_01, partial [Pinus cembra] AFB32279.1
           hypothetical protein 0_11649_01, partial [Pinus cembra]
           AFB32280.1 hypothetical protein 0_11649_01, partial
           [Pinus cembra] AFB32281.1 hypothetical protein
           0_11649_01, partial [Pinus cembra] AFB32282.1
           hypothetical protein 0_11649_01, partial [Pinus cembra]
           AFB32283.1 hypothetical protein 0_11649_01, partial
           [Pinus cembra] AFB32284.1 hypothetical protein
           0_11649_01, partial [Pinus mugo] AFB32285.1 hypothetical
           protein 0_11649_01, partial [Pinus mugo]
          Length = 148

 Score = 86.7 bits (213), Expect = 3e-18
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = -2

Query: 117 GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 1
           GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG
Sbjct: 40  GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 78


>APT35300.1 beta-tubulin subunit, partial [Amaranthus tuberculatus]
          Length = 52

 Score = 83.6 bits (205), Expect = 4e-18
 Identities = 37/38 (97%), Positives = 38/38 (100%)
 Frame = -2

Query: 117 GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGG 4
           GHYTEGAELIDSVLDVVRKEAENCDC+QGFQVCHSLGG
Sbjct: 15  GHYTEGAELIDSVLDVVRKEAENCDCMQGFQVCHSLGG 52


>AEW07474.1 hypothetical protein 0_2321_02, partial [Pinus lambertiana]
           AFG62100.1 hypothetical protein 0_2321_02, partial
           [Pinus taeda] AFG62101.1 hypothetical protein 0_2321_02,
           partial [Pinus taeda] AFG62102.1 hypothetical protein
           0_2321_02, partial [Pinus taeda] AFG62103.1 hypothetical
           protein 0_2321_02, partial [Pinus taeda] AFG62104.1
           hypothetical protein 0_2321_02, partial [Pinus taeda]
           AFG62105.1 hypothetical protein 0_2321_02, partial
           [Pinus taeda] AFG62106.1 hypothetical protein 0_2321_02,
           partial [Pinus taeda] AFG62107.1 hypothetical protein
           0_2321_02, partial [Pinus taeda] AFG62108.1 hypothetical
           protein 0_2321_02, partial [Pinus taeda] AFG62109.1
           hypothetical protein 0_2321_02, partial [Pinus taeda]
           AFG62110.1 hypothetical protein 0_2321_02, partial
           [Pinus taeda] AFG62111.1 hypothetical protein 0_2321_02,
           partial [Pinus taeda] AFG62112.1 hypothetical protein
           0_2321_02, partial [Pinus taeda] AFG62113.1 hypothetical
           protein 0_2321_02, partial [Pinus taeda] AFG62114.1
           hypothetical protein 0_2321_02, partial [Pinus taeda]
           AFG62115.1 hypothetical protein 0_2321_02, partial
           [Pinus taeda] AFG62116.1 hypothetical protein 0_2321_02,
           partial [Pinus taeda]
          Length = 160

 Score = 86.7 bits (213), Expect = 4e-18
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = -2

Query: 117 GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 1
           GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG
Sbjct: 47  GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 85


>JAU26293.1 Tubulin beta-8 chain, partial [Noccaea caerulescens] JAU37254.1
           Tubulin beta-8 chain, partial [Noccaea caerulescens]
           JAU74059.1 Tubulin beta-8 chain, partial [Noccaea
           caerulescens] JAU89987.1 Tubulin beta-8 chain, partial
           [Noccaea caerulescens]
          Length = 170

 Score = 86.7 bits (213), Expect = 5e-18
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = -2

Query: 117 GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 1
           GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG
Sbjct: 91  GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 129


>CEO92151.1 beta-tubulin, partial [Camelina sp. CameTUB9]
          Length = 171

 Score = 86.7 bits (213), Expect = 5e-18
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = -2

Query: 117 GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 1
           GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG
Sbjct: 5   GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 43


>CEO92148.1 beta-tubulin, partial [Camelina sp. CameTUB6]
          Length = 171

 Score = 86.7 bits (213), Expect = 5e-18
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = -2

Query: 117 GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 1
           GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG
Sbjct: 5   GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 43


>CEO92147.1 beta-tubulin, partial [Camelina sp. CameTUB5]
          Length = 171

 Score = 86.7 bits (213), Expect = 5e-18
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = -2

Query: 117 GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 1
           GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG
Sbjct: 5   GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 43


>CEO92141.1 beta-tubulin, partial [Camelina laxa]
          Length = 171

 Score = 86.7 bits (213), Expect = 5e-18
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = -2

Query: 117 GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 1
           GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG
Sbjct: 5   GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 43


>CEO92140.1 beta-tubulin, partial [Camelina laxa]
          Length = 171

 Score = 86.7 bits (213), Expect = 5e-18
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = -2

Query: 117 GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 1
           GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG
Sbjct: 5   GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 43


>CEO92138.1 beta-tubulin, partial [Camelina laxa]
          Length = 171

 Score = 86.7 bits (213), Expect = 5e-18
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = -2

Query: 117 GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 1
           GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG
Sbjct: 5   GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 43


>CEO92132.1 beta-tubulin, partial [Camelina laxa]
          Length = 171

 Score = 86.7 bits (213), Expect = 5e-18
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = -2

Query: 117 GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 1
           GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG
Sbjct: 5   GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 43


>CEO92131.1 beta-tubulin, partial [Camelina hispida]
          Length = 171

 Score = 86.7 bits (213), Expect = 5e-18
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = -2

Query: 117 GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 1
           GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG
Sbjct: 5   GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 43


>CEO92130.1 beta-tubulin, partial [Camelina hispida]
          Length = 171

 Score = 86.7 bits (213), Expect = 5e-18
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = -2

Query: 117 GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 1
           GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG
Sbjct: 5   GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 43


>CEO92129.1 beta-tubulin, partial [Camelina hispida]
          Length = 171

 Score = 86.7 bits (213), Expect = 5e-18
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = -2

Query: 117 GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 1
           GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG
Sbjct: 5   GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 43


>CEO92128.1 beta-tubulin, partial [Camelina hispida]
          Length = 171

 Score = 86.7 bits (213), Expect = 5e-18
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = -2

Query: 117 GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 1
           GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG
Sbjct: 5   GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGG 43


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