BLASTX nr result

ID: Panax25_contig00006834 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00006834
         (766 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017223689.1 PREDICTED: 30S ribosomal protein 3-1, chloroplast...    55   9e-06

>XP_017223689.1 PREDICTED: 30S ribosomal protein 3-1, chloroplastic-like [Daucus
           carota subsp. sativus] KZM85854.1 hypothetical protein
           DCAR_026724 [Daucus carota subsp. sativus]
          Length = 172

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 33/54 (61%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
 Frame = -2

Query: 414 VQSGIKGSFTCPSFPSQKPSSYSVKHQAFC-RHSSTIFVLKSRPIRRIDSLCAS 256
           VQSGIKGSFT PSFP     S +VKHQA    H S  F +KS+P RRI SLC S
Sbjct: 6   VQSGIKGSFTRPSFP-----SCNVKHQALALPHFSQSFGVKSKPFRRIRSLCVS 54


Top