BLASTX nr result
ID: Panax25_contig00006032
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00006032
(379 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
JAU16310.1 Retrovirus-related Pol polyprotein from transposon TN... 113 1e-26
GAV91868.1 gag_pre-integrs domain-containing protein, partial [C... 103 5e-26
GAV86111.1 gag_pre-integrs domain-containing protein, partial [C... 100 2e-24
GAV82190.1 gag_pre-integrs domain-containing protein [Cephalotus... 99 3e-24
GAV82844.1 LOW QUALITY PROTEIN: gag_pre-integrs domain-containin... 99 4e-24
GAV84070.1 gag_pre-integrs domain-containing protein [Cephalotus... 98 7e-24
GAV79091.1 gag_pre-integrs domain-containing protein, partial [C... 98 7e-24
GAV59698.1 gag_pre-integrs domain-containing protein, partial [C... 97 9e-24
GAV72734.1 gag_pre-integrs domain-containing protein, partial [C... 96 3e-23
CAN66743.1 hypothetical protein VITISV_043469 [Vitis vinifera] 103 3e-23
GAV75307.1 gag_pre-integrs domain-containing protein, partial [C... 96 5e-23
JAT62736.1 Retrovirus-related Pol polyprotein from transposon TN... 101 6e-23
GAV78417.1 gag_pre-integrs domain-containing protein [Cephalotus... 95 6e-23
GAV63432.1 gag_pre-integrs domain-containing protein [Cephalotus... 95 7e-23
GAV65579.1 rve domain-containing protein/gag_pre-integrs domain-... 97 1e-22
GAV58760.1 gag_pre-integrs domain-containing protein [Cephalotus... 95 1e-22
XP_016570784.1 PREDICTED: uncharacterized mitochondrial protein ... 95 2e-22
GAV73691.1 gag_pre-integrs domain-containing protein [Cephalotus... 95 2e-22
XP_018625891.1 PREDICTED: uncharacterized protein LOC108944919, ... 95 2e-22
XP_017178258.1 PREDICTED: uncharacterized mitochondrial protein ... 94 2e-22
>JAU16310.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 825
Score = 113 bits (282), Expect = 1e-26
Identities = 55/105 (52%), Positives = 73/105 (69%), Gaps = 1/105 (0%)
Frame = +2
Query: 2 MVIMKG*KKG-TLYKLIGDTVAGGTTISV*DNSNSNNTEL*HMRLGHFSEGGKKKLHKRQ 178
MV+MKG G + Y+L+G+ VAGG +V S S++T L HMRLGH G +LHKR
Sbjct: 402 MVMMKGVMTGGSTYRLVGNVVAGGAAAAV---SESDSTALWHMRLGHIGTHGLNELHKRG 458
Query: 179 LLKGVKTCSLEFCKFCVYDKQRRVNFKEGTHISKNVLNYIHSDIW 313
LL G+K C ++FCKFCV KQ RV+FK G H +K +L+Y+HSD+W
Sbjct: 459 LLGGMKNCKMDFCKFCVMGKQSRVSFKTGLHTTKGLLDYVHSDVW 503
>GAV91868.1 gag_pre-integrs domain-containing protein, partial [Cephalotus
follicularis]
Length = 119
Score = 103 bits (256), Expect = 5e-26
Identities = 54/104 (51%), Positives = 63/104 (60%)
Frame = +2
Query: 2 MVIMKG*KKGTLYKLIGDTVAGGTTISV*DNSNSNNTEL*HMRLGHFSEGGKKKLHKRQL 181
+V+MKG K LY L G TV G I+ S T+L HMRLGH SE G L KR L
Sbjct: 10 LVVMKGTKVNNLYHLQGSTVMGSADIASISISEDYRTKLWHMRLGHMSERGLSTLSKRGL 69
Query: 182 LKGVKTCSLEFCKFCVYDKQRRVNFKEGTHISKNVLNYIHSDIW 313
L G +T LEFC+ CV KQ RV F GTH +K L+YIHSD+W
Sbjct: 70 LCGEQTTPLEFCEHCVVGKQTRVKFSTGTHSTKGTLDYIHSDLW 113
>GAV86111.1 gag_pre-integrs domain-containing protein, partial [Cephalotus
follicularis]
Length = 138
Score = 99.8 bits (247), Expect = 2e-24
Identities = 52/109 (47%), Positives = 68/109 (62%)
Frame = +2
Query: 2 MVIMKG*KKGTLYKLIGDTVAGGTTISV*DNSNSNNTEL*HMRLGHFSEGGKKKLHKRQL 181
++ MKG K G+LYKL G TV G +S S+S++T+L HMRLGH SE L KR L
Sbjct: 10 ILFMKGLKVGSLYKLQGSTVIGSVAVSS-SVSDSDDTKLWHMRLGHMSEREMNNLSKRGL 68
Query: 182 LKGVKTCSLEFCKFCVYDKQRRVNFKEGTHISKNVLNYIHSDIWDRSII 328
L G L FC+ C+Y KQ+RV+F H +K L+YIHSD+W S +
Sbjct: 69 LGGHSIGKLNFCEHCIYGKQKRVSFSTAIHRTKGTLDYIHSDLWGPSSV 117
>GAV82190.1 gag_pre-integrs domain-containing protein [Cephalotus follicularis]
Length = 115
Score = 98.6 bits (244), Expect = 3e-24
Identities = 51/101 (50%), Positives = 61/101 (60%)
Frame = +2
Query: 11 MKG*KKGTLYKLIGDTVAGGTTISV*DNSNSNNTEL*HMRLGHFSEGGKKKLHKRQLLKG 190
MKG K LY L G TV G ++ S + T+L HMRLGH S+ G L KR LL G
Sbjct: 1 MKGTKVNHLYHLQGSTVMGSVDVASSSVSEDDRTKLWHMRLGHMSQRGLSTLSKRGLLCG 60
Query: 191 VKTCSLEFCKFCVYDKQRRVNFKEGTHISKNVLNYIHSDIW 313
+T LEFC+ CV KQ RV F GTH +K L+YIHSD+W
Sbjct: 61 EQTTPLEFCEHCVVGKQTRVKFSTGTHSTKGTLDYIHSDLW 101
>GAV82844.1 LOW QUALITY PROTEIN: gag_pre-integrs domain-containing protein,
partial [Cephalotus follicularis]
Length = 121
Score = 98.6 bits (244), Expect = 4e-24
Identities = 53/109 (48%), Positives = 71/109 (65%)
Frame = +2
Query: 2 MVIMKG*KKGTLYKLIGDTVAGGTTISV*DNSNSNNTEL*HMRLGHFSEGGKKKLHKRQL 181
++ MKG K G+LYKL G TV G T+S S+S+ T+L HMRLG SE G L KR L
Sbjct: 14 ILFMKGLKVGSLYKLQGSTVIGSVTVSS-SVSDSDGTKLWHMRLGRISERGMHNLSKRGL 72
Query: 182 LKGVKTCSLEFCKFCVYDKQRRVNFKEGTHISKNVLNYIHSDIWDRSII 328
L GV T L+FC+ C+Y K +RV+F H +K +L+YI+SD+W S +
Sbjct: 73 L-GVTTKKLDFCEHCIYGKYKRVSFSTTIHKTKGILDYIYSDLWSPSSV 120
>GAV84070.1 gag_pre-integrs domain-containing protein [Cephalotus follicularis]
Length = 131
Score = 98.2 bits (243), Expect = 7e-24
Identities = 53/105 (50%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Frame = +2
Query: 11 MKG*KKGTLYKLIGDTVAGGTTI-SV*DNSNSNNTEL*HMRLGHFSEGGKKKLHKRQLLK 187
MKG K LY+L G+TV G + S N + + T L HMRLGH SE G + L K+ LL
Sbjct: 1 MKGKKIDGLYQLQGNTVLGTAAVASSSGNKDVDTTPLWHMRLGHLSERGLQILSKKGLLA 60
Query: 188 GVKTCSLEFCKFCVYDKQRRVNFKEGTHISKNVLNYIHSDIWDRS 322
GVK+ L+FC+ CVY KQ RV F H +K +L+YIHSD+WD S
Sbjct: 61 GVKSGKLDFCEHCVYGKQCRVKFSTAIHKTKGILDYIHSDLWDPS 105
>GAV79091.1 gag_pre-integrs domain-containing protein, partial [Cephalotus
follicularis]
Length = 119
Score = 97.8 bits (242), Expect = 7e-24
Identities = 51/104 (49%), Positives = 63/104 (60%)
Frame = +2
Query: 2 MVIMKG*KKGTLYKLIGDTVAGGTTISV*DNSNSNNTEL*HMRLGHFSEGGKKKLHKRQL 181
+V+MKG K LY L G TV G ++ S + T+L HMRLGH SE G L KR L
Sbjct: 10 LVVMKGTKVNHLYHLQGSTVMGSADVTSCSVSEDDRTKLWHMRLGHMSERGLSTLSKRGL 69
Query: 182 LKGVKTCSLEFCKFCVYDKQRRVNFKEGTHISKNVLNYIHSDIW 313
L G +T LEFC+ CV KQ V F GTH +K L++IHSD+W
Sbjct: 70 LCGDQTTPLEFCEHCVVGKQTIVRFSTGTHSTKGTLDHIHSDLW 113
>GAV59698.1 gag_pre-integrs domain-containing protein, partial [Cephalotus
follicularis]
Length = 119
Score = 97.4 bits (241), Expect = 9e-24
Identities = 51/104 (49%), Positives = 63/104 (60%)
Frame = +2
Query: 2 MVIMKG*KKGTLYKLIGDTVAGGTTISV*DNSNSNNTEL*HMRLGHFSEGGKKKLHKRQL 181
+V+MKG K LY L G TV G ++ S + T+L HMRLGH SE G L KR L
Sbjct: 10 LVVMKGTKINHLYHLQGSTVIGSVDVASISVSKDDRTKLWHMRLGHRSECGLSTLSKRGL 69
Query: 182 LKGVKTCSLEFCKFCVYDKQRRVNFKEGTHISKNVLNYIHSDIW 313
L G +T LEFC+ CV KQ RV F GTH +K L+Y HS++W
Sbjct: 70 LCGEQTTPLEFCEHCVVGKQTRVRFSTGTHSTKGTLDYTHSNLW 113
>GAV72734.1 gag_pre-integrs domain-containing protein, partial [Cephalotus
follicularis]
Length = 118
Score = 96.3 bits (238), Expect = 3e-23
Identities = 50/104 (48%), Positives = 61/104 (58%)
Frame = +2
Query: 2 MVIMKG*KKGTLYKLIGDTVAGGTTISV*DNSNSNNTEL*HMRLGHFSEGGKKKLHKRQL 181
+V+MKG K LY L G T+ G ++ S T+L HMRL H SE G L KR L
Sbjct: 9 LVVMKGTKVNHLYHLQGSTLMGSADVASSSVSEDGRTKLWHMRLVHMSERGLSTLSKRGL 68
Query: 182 LKGVKTCSLEFCKFCVYDKQRRVNFKEGTHISKNVLNYIHSDIW 313
L G +T LEFC+ CV Q RV F GTH +K L+YIHSD+W
Sbjct: 69 LCGEQTTPLEFCEHCVVGNQTRVKFSTGTHSTKGTLDYIHSDLW 112
>CAN66743.1 hypothetical protein VITISV_043469 [Vitis vinifera]
Length = 798
Score = 103 bits (257), Expect = 3e-23
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Frame = +2
Query: 2 MVIMKG*K-KGTLYKLIGDTVAGGTTISV*DNSNSNNTEL*HMRLGHFSEGGKKKLHKRQ 178
M +MKG K G +YK +G T+ GG S S N +M LGH E G + HKR
Sbjct: 213 MTVMKGQKLAGNIYKPLGTTIVGGVATV---KSESCNIVFWNMWLGHXGECGLMEFHKRN 269
Query: 179 LLKGVKTCSLEFCKFCVYDKQRRVNFKEGTHISKNVLNYIHSDIW 313
LLKG+KTC L+FCK+CV+ KQ +V FK TH ++ VL+Y+H+D+W
Sbjct: 270 LLKGIKTCKLDFCKYCVFRKQNKVQFKTATHKTEGVLDYVHTDVW 314
>GAV75307.1 gag_pre-integrs domain-containing protein, partial [Cephalotus
follicularis]
Length = 118
Score = 95.5 bits (236), Expect = 5e-23
Identities = 51/104 (49%), Positives = 60/104 (57%)
Frame = +2
Query: 2 MVIMKG*KKGTLYKLIGDTVAGGTTISV*DNSNSNNTEL*HMRLGHFSEGGKKKLHKRQL 181
+V+MKG K LY L G TV G ++ S + T+L HM LGH SE G L KR L
Sbjct: 10 LVVMKGTKVNHLYHLQGSTVMGFADVASSSVSEDDRTKLWHMGLGHMSERGLSTLSKRGL 69
Query: 182 LKGVKTCSLEFCKFCVYDKQRRVNFKEGTHISKNVLNYIHSDIW 313
L G T LEFC+ CV K RV F GTH K L+YIHSD+W
Sbjct: 70 LCGEHTTPLEFCEHCVVGKHTRVKFSTGTHSIKGTLDYIHSDLW 113
>JAT62736.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Anthurium amnicola]
Length = 439
Score = 101 bits (252), Expect(2) = 6e-23
Identities = 49/104 (47%), Positives = 70/104 (67%)
Frame = +2
Query: 2 MVIMKG*KKGTLYKLIGDTVAGGTTISV*DNSNSNNTEL*HMRLGHFSEGGKKKLHKRQL 181
+ +MKG + GTLY+L G V G I+ +S+++ T L + RLGH SE G +LHK++L
Sbjct: 269 LTVMKGERTGTLYRLHGKIVTGNAAIT--SSSDNDATLLWYARLGHMSERGMLELHKKKL 326
Query: 182 LKGVKTCSLEFCKFCVYDKQRRVNFKEGTHISKNVLNYIHSDIW 313
LK V++C L+FC+ CV KQ RV F H SK++L Y+HSD+W
Sbjct: 327 LKDVQSCKLDFCECCVLGKQCRVKFVTSRHRSKDILEYVHSDVW 370
Score = 33.1 bits (74), Expect(2) = 6e-23
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +1
Query: 328 TSMGGAHYFVSFIDDYS 378
TS+GGA YFV+FIDD+S
Sbjct: 376 TSLGGARYFVTFIDDFS 392
>GAV78417.1 gag_pre-integrs domain-containing protein [Cephalotus follicularis]
Length = 111
Score = 95.1 bits (235), Expect = 6e-23
Identities = 53/104 (50%), Positives = 61/104 (58%)
Frame = +2
Query: 2 MVIMKG*KKGTLYKLIGDTVAGGTTISV*DNSNSNNTEL*HMRLGHFSEGGKKKLHKRQL 181
MV+MKG K LY L G TV G +S S + T+ HMRLGH SE G L KR L
Sbjct: 1 MVVMKGNKINHLYHLQGSTVIGSADVSSSSVSEDDKTKQWHMRLGHMSERGLTILSKRGL 60
Query: 182 LKGVKTCSLEFCKFCVYDKQRRVNFKEGTHISKNVLNYIHSDIW 313
L G +T LEFC+ V KQ RV F GTH K L+YIHSD+W
Sbjct: 61 LCGEQTTPLEFCEHRVIGKQSRVRFNIGTHSIKGTLDYIHSDLW 104
>GAV63432.1 gag_pre-integrs domain-containing protein [Cephalotus follicularis]
Length = 115
Score = 95.1 bits (235), Expect = 7e-23
Identities = 51/103 (49%), Positives = 61/103 (59%)
Frame = +2
Query: 11 MKG*KKGTLYKLIGDTVAGGTTISV*DNSNSNNTEL*HMRLGHFSEGGKKKLHKRQLLKG 190
MKG K LY L G TV G ++ S + T+L HM LGH SE G L KR LL G
Sbjct: 1 MKGTKVNHLYHLQGSTVMGSADVASSSVSEDDRTKLWHMLLGHMSERGLSTLSKRGLLCG 60
Query: 191 VKTCSLEFCKFCVYDKQRRVNFKEGTHISKNVLNYIHSDIWDR 319
+T LEFC+ CV KQ RV F GTH +K++L YIHSD D+
Sbjct: 61 EQTTPLEFCEHCVVGKQNRVRFSTGTHSTKSILEYIHSDYGDQ 103
>GAV65579.1 rve domain-containing protein/gag_pre-integrs domain-containing
protein [Cephalotus follicularis]
Length = 193
Score = 96.7 bits (239), Expect = 1e-22
Identities = 51/101 (50%), Positives = 62/101 (61%)
Frame = +2
Query: 11 MKG*KKGTLYKLIGDTVAGGTTISV*DNSNSNNTEL*HMRLGHFSEGGKKKLHKRQLLKG 190
MKG K LY L G TV G ++ S ++ T+L HMRL H SE G L KR LL G
Sbjct: 1 MKGNKVNHLYHLHGSTVMGFAAVTSNSISENDRTKLWHMRLDHISERGMTTLSKRGLLCG 60
Query: 191 VKTCSLEFCKFCVYDKQRRVNFKEGTHISKNVLNYIHSDIW 313
T SL+FC+ CV KQ RV F +GTH +K L+YIHSD+W
Sbjct: 61 EHTTSLDFCEHCVIGKQCRVRFSKGTHSTKGTLDYIHSDLW 101
>GAV58760.1 gag_pre-integrs domain-containing protein [Cephalotus follicularis]
Length = 143
Score = 95.1 bits (235), Expect = 1e-22
Identities = 52/104 (50%), Positives = 63/104 (60%)
Frame = +2
Query: 11 MKG*KKGTLYKLIGDTVAGGTTISV*DNSNSNNTEL*HMRLGHFSEGGKKKLHKRQLLKG 190
MK K +LYKL G TV G TIS S+S +T+L HMRLGH SE G L KR LL G
Sbjct: 1 MKRLKVDSLYKLHGSTVIGSVTISS-SVSDSYDTKLWHMRLGHMSEKGMNNLSKRGLLGG 59
Query: 191 VKTCSLEFCKFCVYDKQRRVNFKEGTHISKNVLNYIHSDIWDRS 322
L+FC+ C+Y KQ+RVNF G H + +YIHS +W S
Sbjct: 60 NSVGKLDFCEHCIYGKQKRVNFSTGIHGTNGTFDYIHSYLWGPS 103
>XP_016570784.1 PREDICTED: uncharacterized mitochondrial protein AtMg00300-like
[Capsicum annuum]
Length = 152
Score = 95.1 bits (235), Expect = 2e-22
Identities = 49/104 (47%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
Frame = +2
Query: 2 MVIMKG*KK-GTLYKLIGDTVAGGTTISV*DNSNSNNTEL*HMRLGHFSEGGKKKLHKRQ 178
+V+MKG +K LY L G TV G T+S S+ +L H+RLGH SE G +L +R
Sbjct: 49 LVMMKGQRKYANLYILQGFTVTGDATVSTSSLLKSDVAKLWHIRLGHMSENGMTELSRRG 108
Query: 179 LLKGVKTCSLEFCKFCVYDKQRRVNFKEGTHISKNVLNYIHSDI 310
LL G LEFC+ C+++KQ+RV F +G H +K LNYIHSD+
Sbjct: 109 LLDGQSITKLEFCEHCIFEKQKRVKFTKGIHSTKGTLNYIHSDL 152
>GAV73691.1 gag_pre-integrs domain-containing protein [Cephalotus follicularis]
Length = 142
Score = 94.7 bits (234), Expect = 2e-22
Identities = 48/106 (45%), Positives = 66/106 (62%)
Frame = +2
Query: 11 MKG*KKGTLYKLIGDTVAGGTTISV*DNSNSNNTEL*HMRLGHFSEGGKKKLHKRQLLKG 190
MKG K +LYKL G T+ G +S S+ ++T+L HMRLGH SE G L KR LL G
Sbjct: 1 MKGLKVDSLYKLQGSTIFGSAAVSS-SVSDLDDTKLWHMRLGHISERGMNNLSKRDLLGG 59
Query: 191 VKTCSLEFCKFCVYDKQRRVNFKEGTHISKNVLNYIHSDIWDRSII 328
L+FC++C+Y KQ+ V+F H +K L+YIHS++W S +
Sbjct: 60 HSIGKLDFCEYCIYGKQKIVSFSTAIHKTKGTLDYIHSELWGLSSV 105
>XP_018625891.1 PREDICTED: uncharacterized protein LOC108944919, partial [Nicotiana
tomentosiformis]
Length = 148
Score = 94.7 bits (234), Expect = 2e-22
Identities = 50/110 (45%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
Frame = +2
Query: 2 MVIMKG*KKGT-LYKLIGDTVAGGTTISV*DNSNSNNTEL*HMRLGHFSEGGKKKLHKRQ 178
+V+MK +K +Y+ G TV G T++ D+ T L HMRLGH K L +
Sbjct: 8 LVVMKANRKNNNMYRYRGSTVIGTATVTSSDDKEVEATRLWHMRLGHAGGKSLKALSNQG 67
Query: 179 LLKGVKTCSLEFCKFCVYDKQRRVNFKEGTHISKNVLNYIHSDIWDRSII 328
LLKGVKTC+LEFC+ CV KQ RV F H +K +L+Y++SDIW S I
Sbjct: 68 LLKGVKTCNLEFCEHCVKGKQIRVKFGTAIHNTKGILDYVYSDIWGSSKI 117
>XP_017178258.1 PREDICTED: uncharacterized mitochondrial protein AtMg00300-like
[Malus domestica]
Length = 135
Score = 94.4 bits (233), Expect = 2e-22
Identities = 47/104 (45%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
Frame = +2
Query: 2 MVIMKG*KKGTLYKLIGDTVAGGTTIS-V*DNSNSNNTEL*HMRLGHFSEGGKKKLHKRQ 178
+V+MKG ++ LY L G TV GG ++ D +++ T L HMRLGH E + L K+
Sbjct: 32 LVVMKGIRQNNLYFLQGSTVIGGAAVTEAADADSTDTTRLWHMRLGHAGEKALQGLVKQG 91
Query: 179 LLKGVKTCSLEFCKFCVYDKQRRVNFKEGTHISKNVLNYIHSDI 310
LLKG K C LEFC+ CV KQ RV F H +K +L+Y+H+D+
Sbjct: 92 LLKGAKACKLEFCEHCVLGKQTRVKFGTAIHHTKGILDYVHTDV 135