BLASTX nr result
ID: Panax25_contig00003982
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00003982
(896 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017252812.1 PREDICTED: beta-glucosidase 22-like [Daucus carot... 84 2e-16
XP_016449236.1 PREDICTED: E3 ubiquitin protein ligase RIE1-like,... 82 8e-15
XP_016480196.1 PREDICTED: E3 ubiquitin protein ligase RIE1-like ... 82 5e-14
XP_016444596.1 PREDICTED: E3 ubiquitin protein ligase RIE1-like ... 82 5e-14
XP_009608303.1 PREDICTED: E3 ubiquitin protein ligase RIE1-like ... 82 5e-14
XP_009765931.1 PREDICTED: cleavage and polyadenylation specifici... 82 1e-13
XP_012072307.1 PREDICTED: E3 ubiquitin protein ligase RIE1 [Jatr... 80 1e-13
XP_015578951.1 PREDICTED: E3 ubiquitin protein ligase RIE1 [Rici... 80 3e-13
EEF36424.1 cleavage and polyadenylation specificity factor, puta... 80 6e-13
XP_015967218.1 PREDICTED: E3 ubiquitin protein ligase RIE1 [Arac... 77 8e-13
OIT20685.1 e3 ubiquitin protein ligase rie1 [Nicotiana attenuata] 75 1e-12
XP_017978275.1 PREDICTED: beta-glucosidase 11 isoform X3 [Theobr... 74 1e-12
XP_017978265.1 PREDICTED: beta-glucosidase 11 isoform X1 [Theobr... 74 1e-12
XP_017978277.1 PREDICTED: beta-glucosidase 11 isoform X4 [Theobr... 74 1e-12
XP_015073612.1 PREDICTED: E3 ubiquitin protein ligase RIE1 [Sola... 78 1e-12
EOX95065.1 Beta glucosidase 11 isoform 1 [Theobroma cacao] 73 1e-12
EOX95066.1 Beta glucosidase 11 isoform 2 [Theobroma cacao] 73 1e-12
EOX95067.1 Beta glucosidase 11, putative isoform 3 [Theobroma ca... 73 1e-12
XP_013449166.1 glycoside hydrolase family protein [Medicago trun... 74 2e-12
XP_013449165.1 glycoside hydrolase family protein [Medicago trun... 74 2e-12
>XP_017252812.1 PREDICTED: beta-glucosidase 22-like [Daucus carota subsp. sativus]
KZM95096.1 hypothetical protein DCAR_018338 [Daucus
carota subsp. sativus]
Length = 516
Score = 84.3 bits (207), Expect(2) = 2e-16
Identities = 42/54 (77%), Positives = 44/54 (81%), Gaps = 1/54 (1%)
Frame = -2
Query: 163 NL*AMAGYDIRMMPPGCCS-STFRINCTKGNSSYEPYTVAHNKLLAHASTARLY 5
N+ AMAGYD+ MMPPG CS S F NC KGNSSYEPYTVAHN LLAHAS ARLY
Sbjct: 202 NMVAMAGYDMGMMPPGRCSISLFGSNCDKGNSSYEPYTVAHNMLLAHASAARLY 255
Score = 30.4 bits (67), Expect(2) = 2e-16
Identities = 14/22 (63%), Positives = 18/22 (81%), Gaps = 1/22 (4%)
Frame = -3
Query: 225 RDSTAYADVCFREF-EEIFLFT 163
RD TAYA+VCFREF + +F +T
Sbjct: 175 RDFTAYANVCFREFGDRVFHWT 196
>XP_016449236.1 PREDICTED: E3 ubiquitin protein ligase RIE1-like, partial
[Nicotiana tabacum]
Length = 210
Score = 81.6 bits (200), Expect = 8e-15
Identities = 35/52 (67%), Positives = 47/52 (90%)
Frame = -3
Query: 894 EGASDADISILPKYRFQICTDEDKPTIGAGRMVPIATSSGDLASKQIVIPED 739
EGAS+AD+ +LPKYRF IC DE+KP++GAG+MVPI TSSG LA+++I++PED
Sbjct: 105 EGASEADLKVLPKYRFHICKDEEKPSVGAGKMVPIETSSGYLANERILLPED 156
>XP_016480196.1 PREDICTED: E3 ubiquitin protein ligase RIE1-like [Nicotiana
tabacum]
Length = 345
Score = 81.6 bits (200), Expect = 5e-14
Identities = 35/52 (67%), Positives = 47/52 (90%)
Frame = -3
Query: 894 EGASDADISILPKYRFQICTDEDKPTIGAGRMVPIATSSGDLASKQIVIPED 739
EGAS+AD+ +LPKYRF IC DE+KP++GAG+MVPI TSSG LA+++I++PED
Sbjct: 240 EGASEADLKVLPKYRFHICKDEEKPSVGAGKMVPIETSSGYLANERILLPED 291
>XP_016444596.1 PREDICTED: E3 ubiquitin protein ligase RIE1-like [Nicotiana
tabacum]
Length = 345
Score = 81.6 bits (200), Expect = 5e-14
Identities = 35/52 (67%), Positives = 47/52 (90%)
Frame = -3
Query: 894 EGASDADISILPKYRFQICTDEDKPTIGAGRMVPIATSSGDLASKQIVIPED 739
EGAS+AD+ +LPKYRF IC DE+KP++GAG+MVPI TSSG LA+++I++PED
Sbjct: 240 EGASEADLKVLPKYRFHICKDEEKPSVGAGKMVPIETSSGYLANERILLPED 291
>XP_009608303.1 PREDICTED: E3 ubiquitin protein ligase RIE1-like [Nicotiana
tomentosiformis]
Length = 345
Score = 81.6 bits (200), Expect = 5e-14
Identities = 35/52 (67%), Positives = 47/52 (90%)
Frame = -3
Query: 894 EGASDADISILPKYRFQICTDEDKPTIGAGRMVPIATSSGDLASKQIVIPED 739
EGAS+AD+ +LPKYRF IC DE+KP++GAG+MVPI TSSG LA+++I++PED
Sbjct: 240 EGASEADLKVLPKYRFHICKDEEKPSVGAGKMVPIETSSGYLANERILLPED 291
>XP_009765931.1 PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II [Nicotiana sylvestris]
Length = 938
Score = 81.6 bits (200), Expect = 1e-13
Identities = 35/52 (67%), Positives = 47/52 (90%)
Frame = -3
Query: 894 EGASDADISILPKYRFQICTDEDKPTIGAGRMVPIATSSGDLASKQIVIPED 739
EGAS+AD+ +LPKYRF IC DE+KP++GAG+MVPI TSSG LA+++I++PED
Sbjct: 833 EGASEADLKVLPKYRFHICKDEEKPSVGAGKMVPIETSSGYLANERILLPED 884
>XP_012072307.1 PREDICTED: E3 ubiquitin protein ligase RIE1 [Jatropha curcas]
KDP38117.1 hypothetical protein JCGZ_04760 [Jatropha
curcas]
Length = 365
Score = 80.5 bits (197), Expect = 1e-13
Identities = 36/52 (69%), Positives = 48/52 (92%)
Frame = -3
Query: 894 EGASDADISILPKYRFQICTDEDKPTIGAGRMVPIATSSGDLASKQIVIPED 739
EGAS+AD+SILPKYRFQ+ +E+KPT+GAG+MVPI TSSG LA+++I++PED
Sbjct: 260 EGASEADLSILPKYRFQMMVNEEKPTVGAGKMVPIETSSGYLANERILLPED 311
>XP_015578951.1 PREDICTED: E3 ubiquitin protein ligase RIE1 [Ricinus communis]
Length = 365
Score = 79.7 bits (195), Expect = 3e-13
Identities = 35/52 (67%), Positives = 48/52 (92%)
Frame = -3
Query: 894 EGASDADISILPKYRFQICTDEDKPTIGAGRMVPIATSSGDLASKQIVIPED 739
EGAS+AD+SILPKYRFQ+ +E+KP++GAG+MVPI TSSG LA+++I++PED
Sbjct: 260 EGASEADLSILPKYRFQLTVEEEKPSVGAGKMVPIETSSGYLANERILLPED 311
>EEF36424.1 cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 963
Score = 79.7 bits (195), Expect = 6e-13
Identities = 35/52 (67%), Positives = 48/52 (92%)
Frame = -3
Query: 894 EGASDADISILPKYRFQICTDEDKPTIGAGRMVPIATSSGDLASKQIVIPED 739
EGAS+AD+SILPKYRFQ+ +E+KP++GAG+MVPI TSSG LA+++I++PED
Sbjct: 858 EGASEADLSILPKYRFQLTVEEEKPSVGAGKMVPIETSSGYLANERILLPED 909
>XP_015967218.1 PREDICTED: E3 ubiquitin protein ligase RIE1 [Arachis duranensis]
Length = 282
Score = 77.4 bits (189), Expect = 8e-13
Identities = 35/52 (67%), Positives = 47/52 (90%)
Frame = -3
Query: 894 EGASDADISILPKYRFQICTDEDKPTIGAGRMVPIATSSGDLASKQIVIPED 739
EGAS+AD+SI+PKYRF+I +DE+KPT GAGRMVPI TSSG +A+++ ++PED
Sbjct: 177 EGASEADLSIIPKYRFEILSDEEKPTGGAGRMVPIETSSGYVANERTLLPED 228
>OIT20685.1 e3 ubiquitin protein ligase rie1 [Nicotiana attenuata]
Length = 162
Score = 74.7 bits (182), Expect = 1e-12
Identities = 34/52 (65%), Positives = 45/52 (86%)
Frame = -3
Query: 894 EGASDADISILPKYRFQICTDEDKPTIGAGRMVPIATSSGDLASKQIVIPED 739
EGAS+AD+ +LPKYRF I DE+K ++GAGRMVPI TSSG LA+++I++PED
Sbjct: 57 EGASEADLKVLPKYRFHIYKDEEKLSVGAGRMVPIETSSGYLANERILLPED 108
>XP_017978275.1 PREDICTED: beta-glucosidase 11 isoform X3 [Theobroma cacao]
Length = 511
Score = 73.6 bits (179), Expect(2) = 1e-12
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = -2
Query: 163 NL*AMAGYDIRMMPPGCCSSTFRINCTKGNSSYEPYTVAHNKLLAHASTARLY 5
N+ A+ GYD ++PP CSS F INCT+G+SS EPYTV HN LLAHAS ARLY
Sbjct: 191 NVFAIGGYDQGVIPPRHCSSPFGINCTRGDSSTEPYTVVHNILLAHASAARLY 243
Score = 28.5 bits (62), Expect(2) = 1e-12
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -3
Query: 225 RDSTAYADVCFREF 184
+D TAYA+VCFREF
Sbjct: 164 KDFTAYANVCFREF 177
>XP_017978265.1 PREDICTED: beta-glucosidase 11 isoform X1 [Theobroma cacao]
XP_007050908.2 PREDICTED: beta-glucosidase 11 isoform X2
[Theobroma cacao]
Length = 511
Score = 73.6 bits (179), Expect(2) = 1e-12
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = -2
Query: 163 NL*AMAGYDIRMMPPGCCSSTFRINCTKGNSSYEPYTVAHNKLLAHASTARLY 5
N+ A+ GYD ++PP CSS F INCT+G+SS EPYTV HN LLAHAS ARLY
Sbjct: 191 NVFAIGGYDQGVIPPRHCSSPFGINCTRGDSSTEPYTVVHNILLAHASAARLY 243
Score = 28.5 bits (62), Expect(2) = 1e-12
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -3
Query: 225 RDSTAYADVCFREF 184
+D TAYA+VCFREF
Sbjct: 164 KDFTAYANVCFREF 177
>XP_017978277.1 PREDICTED: beta-glucosidase 11 isoform X4 [Theobroma cacao]
XP_017978280.1 PREDICTED: beta-glucosidase 11 isoform X5
[Theobroma cacao]
Length = 488
Score = 73.6 bits (179), Expect(2) = 1e-12
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = -2
Query: 163 NL*AMAGYDIRMMPPGCCSSTFRINCTKGNSSYEPYTVAHNKLLAHASTARLY 5
N+ A+ GYD ++PP CSS F INCT+G+SS EPYTV HN LLAHAS ARLY
Sbjct: 168 NVFAIGGYDQGVIPPRHCSSPFGINCTRGDSSTEPYTVVHNILLAHASAARLY 220
Score = 28.5 bits (62), Expect(2) = 1e-12
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -3
Query: 225 RDSTAYADVCFREF 184
+D TAYA+VCFREF
Sbjct: 141 KDFTAYANVCFREF 154
>XP_015073612.1 PREDICTED: E3 ubiquitin protein ligase RIE1 [Solanum pennellii]
Length = 352
Score = 77.8 bits (190), Expect = 1e-12
Identities = 34/52 (65%), Positives = 45/52 (86%)
Frame = -3
Query: 894 EGASDADISILPKYRFQICTDEDKPTIGAGRMVPIATSSGDLASKQIVIPED 739
EGAS+ D+ +LPKYRF IC +E+KP +GAGRMVPI TSSG LA+++I++PED
Sbjct: 247 EGASEEDLRVLPKYRFHICKNEEKPRVGAGRMVPIETSSGYLATERILLPED 298
>EOX95065.1 Beta glucosidase 11 isoform 1 [Theobroma cacao]
Length = 511
Score = 73.2 bits (178), Expect(2) = 1e-12
Identities = 34/53 (64%), Positives = 41/53 (77%)
Frame = -2
Query: 163 NL*AMAGYDIRMMPPGCCSSTFRINCTKGNSSYEPYTVAHNKLLAHASTARLY 5
N+ A+ GYD ++PP CSS F +NCT+G+SS EPYTV HN LLAHAS ARLY
Sbjct: 191 NVFAIGGYDQGVIPPRHCSSPFGVNCTRGDSSTEPYTVVHNILLAHASAARLY 243
Score = 28.5 bits (62), Expect(2) = 1e-12
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -3
Query: 225 RDSTAYADVCFREF 184
+D TAYA+VCFREF
Sbjct: 164 KDFTAYANVCFREF 177
>EOX95066.1 Beta glucosidase 11 isoform 2 [Theobroma cacao]
Length = 370
Score = 73.2 bits (178), Expect(2) = 1e-12
Identities = 34/53 (64%), Positives = 41/53 (77%)
Frame = -2
Query: 163 NL*AMAGYDIRMMPPGCCSSTFRINCTKGNSSYEPYTVAHNKLLAHASTARLY 5
N+ A+ GYD ++PP CSS F +NCT+G+SS EPYTV HN LLAHAS ARLY
Sbjct: 102 NVFAIGGYDQGVIPPRHCSSPFGVNCTRGDSSTEPYTVVHNILLAHASAARLY 154
Score = 28.5 bits (62), Expect(2) = 1e-12
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -3
Query: 225 RDSTAYADVCFREF 184
+D TAYA+VCFREF
Sbjct: 75 KDFTAYANVCFREF 88
>EOX95067.1 Beta glucosidase 11, putative isoform 3 [Theobroma cacao]
Length = 364
Score = 73.2 bits (178), Expect(2) = 1e-12
Identities = 34/53 (64%), Positives = 41/53 (77%)
Frame = -2
Query: 163 NL*AMAGYDIRMMPPGCCSSTFRINCTKGNSSYEPYTVAHNKLLAHASTARLY 5
N+ A+ GYD ++PP CSS F +NCT+G+SS EPYTV HN LLAHAS ARLY
Sbjct: 102 NVFAIGGYDQGVIPPRHCSSPFGVNCTRGDSSTEPYTVVHNILLAHASAARLY 154
Score = 28.5 bits (62), Expect(2) = 1e-12
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -3
Query: 225 RDSTAYADVCFREF 184
+D TAYA+VCFREF
Sbjct: 75 KDFTAYANVCFREF 88
>XP_013449166.1 glycoside hydrolase family protein [Medicago truncatula] KEH23193.1
glycoside hydrolase family protein [Medicago truncatula]
Length = 529
Score = 73.6 bits (179), Expect(2) = 2e-12
Identities = 35/53 (66%), Positives = 40/53 (75%)
Frame = -2
Query: 163 NL*AMAGYDIRMMPPGCCSSTFRINCTKGNSSYEPYTVAHNKLLAHASTARLY 5
N+ AM GYDI M PP CS +F NC++GNSS EPY VAH+ LLAHAS ARLY
Sbjct: 209 NVYAMYGYDIGMAPPQRCSPSFAANCSRGNSSAEPYLVAHHMLLAHASAARLY 261
Score = 27.7 bits (60), Expect(2) = 2e-12
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 225 RDSTAYADVCFREF 184
+D T+Y DVCFREF
Sbjct: 182 KDFTSYVDVCFREF 195
>XP_013449165.1 glycoside hydrolase family protein [Medicago truncatula] KEH23192.1
glycoside hydrolase family protein [Medicago truncatula]
Length = 519
Score = 73.6 bits (179), Expect(2) = 2e-12
Identities = 35/53 (66%), Positives = 40/53 (75%)
Frame = -2
Query: 163 NL*AMAGYDIRMMPPGCCSSTFRINCTKGNSSYEPYTVAHNKLLAHASTARLY 5
N+ AM GYDI M PP CS +F NC++GNSS EPY VAH+ LLAHAS ARLY
Sbjct: 199 NVYAMYGYDIGMAPPQRCSPSFAANCSRGNSSAEPYLVAHHMLLAHASAARLY 251
Score = 27.7 bits (60), Expect(2) = 2e-12
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 225 RDSTAYADVCFREF 184
+D T+Y DVCFREF
Sbjct: 172 KDFTSYVDVCFREF 185