BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00003740
         (622 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017257730.1 PREDICTED: RNA polymerase sigma factor sigA [Dauc...   104   1e-22
KZM92200.1 hypothetical protein DCAR_020435 [Daucus carota subsp...   104   1e-22
AKC88628.1 sigma factor [Francoa sonchifolia]                          99   2e-20
XP_018828144.1 PREDICTED: RNA polymerase sigma factor sigA-like ...    94   1e-18
XP_018842724.1 PREDICTED: RNA polymerase sigma factor sigA-like ...    89   4e-17
AEO45243.1 sigma factor, partial [Nicotiana tabacum]                   86   6e-17
EEF38395.1 RNA polymerase sigma factor rpoD, putative [Ricinus c...    87   1e-16
XP_002524027.2 PREDICTED: RNA polymerase sigma factor sigA [Rici...    87   1e-16
KJB44351.1 hypothetical protein B456_007G247500 [Gossypium raimo...    86   3e-16
XP_009629626.1 PREDICTED: RNA polymerase sigma factor sigA-like ...    86   4e-16
NP_001312430.1 RNA polymerase sigma factor sigA-like [Nicotiana ...    86   4e-16
KJB44349.1 hypothetical protein B456_007G247500 [Gossypium raimo...    86   4e-16
XP_019263250.1 PREDICTED: RNA polymerase sigma factor sigA-like ...    86   4e-16
KJB44352.1 hypothetical protein B456_007G247500 [Gossypium raimo...    86   4e-16
XP_019263249.1 PREDICTED: RNA polymerase sigma factor sigA-like ...    86   5e-16
XP_016697692.1 PREDICTED: RNA polymerase sigma factor sigA-like ...    86   5e-16
XP_012492333.1 PREDICTED: RNA polymerase sigma factor sigA-like ...    86   5e-16
XP_016697690.1 PREDICTED: RNA polymerase sigma factor sigA-like ...    86   5e-16
XP_012492331.1 PREDICTED: RNA polymerase sigma factor sigA-like ...    86   5e-16
XP_007029767.2 PREDICTED: RNA polymerase sigma factor sigA isofo...    86   6e-16

>XP_017257730.1 PREDICTED: RNA polymerase sigma factor sigA [Daucus carota subsp.
           sativus]
          Length = 506

 Score =  104 bits (260), Expect = 1e-22
 Identities = 54/77 (70%), Positives = 66/77 (85%)
 Frame = +3

Query: 390 HHQVTSPKNLINAKRSSNYSPNFLSSRDAQSIKAVKEHVDTASSPSNVEPWIQSSNHLED 569
           HHQVTS KN+I+AK+SS YS NFLS RD +S+KA+KEHVDTAS PS++EPW QSS +LE 
Sbjct: 39  HHQVTSSKNVISAKKSS-YSSNFLSKRDNRSVKALKEHVDTASIPSDLEPWFQSSKNLEV 97

Query: 570 EIANPEFSVDALLLLQK 620
           EI++ + SVDALLLLQK
Sbjct: 98  EISDFDCSVDALLLLQK 114


>KZM92200.1 hypothetical protein DCAR_020435 [Daucus carota subsp. sativus]
          Length = 545

 Score =  104 bits (260), Expect = 1e-22
 Identities = 54/77 (70%), Positives = 66/77 (85%)
 Frame = +3

Query: 390 HHQVTSPKNLINAKRSSNYSPNFLSSRDAQSIKAVKEHVDTASSPSNVEPWIQSSNHLED 569
           HHQVTS KN+I+AK+SS YS NFLS RD +S+KA+KEHVDTAS PS++EPW QSS +LE 
Sbjct: 39  HHQVTSSKNVISAKKSS-YSSNFLSKRDNRSVKALKEHVDTASIPSDLEPWFQSSKNLEV 97

Query: 570 EIANPEFSVDALLLLQK 620
           EI++ + SVDALLLLQK
Sbjct: 98  EISDFDCSVDALLLLQK 114


>AKC88628.1 sigma factor [Francoa sonchifolia]
          Length = 508

 Score = 98.6 bits (244), Expect = 2e-20
 Identities = 48/78 (61%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
 Frame = +3

Query: 390 HHQVTSPKNLINAKRSSNYSPNFLSS-RDAQSIKAVKEHVDTASSPSNVEPWIQSSNHLE 566
           H+Q++SPK+++ AK+SSNYSP F SS R  Q IKA+KEH++TAS+PSN EPW Q SN LE
Sbjct: 39  HYQISSPKSVVVAKKSSNYSPTFPSSNRQTQPIKALKEHLETASAPSNAEPWFQISNELE 98

Query: 567 DEIANPEFSVDALLLLQK 620
            + ++ E+SVDA LLLQK
Sbjct: 99  KQNSDLEYSVDAFLLLQK 116


>XP_018828144.1 PREDICTED: RNA polymerase sigma factor sigA-like [Juglans regia]
           XP_018828145.1 PREDICTED: RNA polymerase sigma factor
           sigA-like [Juglans regia]
          Length = 509

 Score = 93.6 bits (231), Expect = 1e-18
 Identities = 45/79 (56%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
 Frame = +3

Query: 387 SHHQVTSPKNLINAKRSSNYSPNFLSS-RDAQSIKAVKEHVDTASSPSNVEPWIQSSNHL 563
           +H+Q+TS K +I+AK+S+N++P F S+ +  QSIKAVKEHVD  SSPS  EPW Q SN L
Sbjct: 39  AHYQITSSKKVISAKKSANFTPGFQSAIQQTQSIKAVKEHVDIVSSPSTAEPWFQRSNEL 98

Query: 564 EDEIANPEFSVDALLLLQK 620
           E+E ++  +S++ALLLLQK
Sbjct: 99  EEESSDLHYSMEALLLLQK 117


>XP_018842724.1 PREDICTED: RNA polymerase sigma factor sigA-like [Juglans regia]
           XP_018842725.1 PREDICTED: RNA polymerase sigma factor
           sigA-like [Juglans regia]
          Length = 509

 Score = 89.0 bits (219), Expect = 4e-17
 Identities = 43/79 (54%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
 Frame = +3

Query: 387 SHHQVTSPKNLINAKRSSNYSPNFLSS-RDAQSIKAVKEHVDTASSPSNVEPWIQSSNHL 563
           + +Q+TS K +I++K+SSN+ P+F S+ R A+SIKAVKE VD  SSPS  EPW Q  N+L
Sbjct: 39  AQYQITSTKKVISSKKSSNFGPSFPSAIRQAESIKAVKEDVDIISSPSTAEPWFQRPNNL 98

Query: 564 EDEIANPEFSVDALLLLQK 620
           E+E ++P++ V+ALLLLQ+
Sbjct: 99  EEESSDPDYLVEALLLLQR 117


>AEO45243.1 sigma factor, partial [Nicotiana tabacum]
          Length = 264

 Score = 86.3 bits (212), Expect = 6e-17
 Identities = 43/77 (55%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
 Frame = +3

Query: 393 HQVTSPKNLINAKRSSNYSPNFLSSRDAQSIKAVKEHVDTASS-PSNVEPWIQSSNHLED 569
           H   SPKN+INAK SSNYSP+++S+R  QS+KA+KEHVD AS+  S+ EPW+Q    L++
Sbjct: 37  HHFPSPKNVINAKNSSNYSPSYVSNRKKQSVKALKEHVDIASNRDSDTEPWVQMFKQLQN 96

Query: 570 EIANPEFSVDALLLLQK 620
              + E SV+ LLLLQK
Sbjct: 97  GSCSEEDSVEVLLLLQK 113


>EEF38395.1 RNA polymerase sigma factor rpoD, putative [Ricinus communis]
          Length = 508

 Score = 87.4 bits (215), Expect = 1e-16
 Identities = 45/79 (56%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
 Frame = +3

Query: 387 SHHQVTSPKNLINAKRSSNYSPNFLSS-RDAQSIKAVKEHVDTASSPSNVEPWIQSSNHL 563
           +H+Q+TS K LI AK+SSNY P+F SS R+ QSIKA+KEHVDTAS+PS      ++ N +
Sbjct: 38  THYQITSTKTLIVAKKSSNYGPSFPSSNRNTQSIKALKEHVDTASAPSTAATQFKTFNDM 97

Query: 564 EDEIANPEFSVDALLLLQK 620
           E+E ++ ++SV+ALLLLQK
Sbjct: 98  EEESSDLDYSVEALLLLQK 116


>XP_002524027.2 PREDICTED: RNA polymerase sigma factor sigA [Ricinus communis]
          Length = 509

 Score = 87.4 bits (215), Expect = 1e-16
 Identities = 45/79 (56%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
 Frame = +3

Query: 387 SHHQVTSPKNLINAKRSSNYSPNFLSS-RDAQSIKAVKEHVDTASSPSNVEPWIQSSNHL 563
           +H+Q+TS K LI AK+SSNY P+F SS R+ QSIKA+KEHVDTAS+PS      ++ N +
Sbjct: 39  THYQITSTKTLIVAKKSSNYGPSFPSSNRNTQSIKALKEHVDTASAPSTAATQFKTFNDM 98

Query: 564 EDEIANPEFSVDALLLLQK 620
           E+E ++ ++SV+ALLLLQK
Sbjct: 99  EEESSDLDYSVEALLLLQK 117


>KJB44351.1 hypothetical protein B456_007G247500 [Gossypium raimondii]
          Length = 389

 Score = 85.9 bits (211), Expect = 3e-16
 Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
 Frame = +3

Query: 387 SHHQVTSPKNLINAKRSSNYSPNFLSS-RDAQSIKAVKEHVDTASSPSNVEPWIQSSNHL 563
           S++Q  S K L+ AKRSSN S N  SS R  QSIKA KEHVDTASS S VEPWI  +N L
Sbjct: 39  SYYQTPSTKTLMVAKRSSNCSQNLPSSNRHTQSIKAFKEHVDTASSISTVEPWIHGTNDL 98

Query: 564 EDEIANPEFSVDALLLLQK 620
           E E  + ++SV+ALLLLQK
Sbjct: 99  EQESYDLDYSVEALLLLQK 117


>XP_009629626.1 PREDICTED: RNA polymerase sigma factor sigA-like isoform X2
           [Nicotiana tomentosiformis]
          Length = 502

 Score = 86.3 bits (212), Expect = 4e-16
 Identities = 43/77 (55%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
 Frame = +3

Query: 393 HQVTSPKNLINAKRSSNYSPNFLSSRDAQSIKAVKEHVDTASS-PSNVEPWIQSSNHLED 569
           H   SPKN+INAK SSNYSP+++S+R  QS+KA+KEHVD AS+  S+ EPW+Q    L++
Sbjct: 37  HHFPSPKNVINAKNSSNYSPSYVSNRKKQSVKALKEHVDIASNRDSDTEPWVQMFKQLQN 96

Query: 570 EIANPEFSVDALLLLQK 620
              + E SV+ LLLLQK
Sbjct: 97  GSCSEEDSVEVLLLLQK 113


>NP_001312430.1 RNA polymerase sigma factor sigA-like [Nicotiana tabacum]
           BAA88922.1 sigma factor [Nicotiana tabacum]
          Length = 502

 Score = 86.3 bits (212), Expect = 4e-16
 Identities = 43/77 (55%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
 Frame = +3

Query: 393 HQVTSPKNLINAKRSSNYSPNFLSSRDAQSIKAVKEHVDTASS-PSNVEPWIQSSNHLED 569
           H   SPKN+INAK SSNYSP+++S+R  QS+KA+KEHVD AS+  S+ EPW+Q    L++
Sbjct: 37  HHFPSPKNVINAKNSSNYSPSYVSNRKKQSVKALKEHVDIASNRDSDTEPWVQMFKQLQN 96

Query: 570 EIANPEFSVDALLLLQK 620
              + E SV+ LLLLQK
Sbjct: 97  GSCSEEDSVEVLLLLQK 113


>KJB44349.1 hypothetical protein B456_007G247500 [Gossypium raimondii]
          Length = 416

 Score = 85.9 bits (211), Expect = 4e-16
 Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
 Frame = +3

Query: 387 SHHQVTSPKNLINAKRSSNYSPNFLSS-RDAQSIKAVKEHVDTASSPSNVEPWIQSSNHL 563
           S++Q  S K L+ AKRSSN S N  SS R  QSIKA KEHVDTASS S VEPWI  +N L
Sbjct: 39  SYYQTPSTKTLMVAKRSSNCSQNLPSSNRHTQSIKAFKEHVDTASSISTVEPWIHGTNDL 98

Query: 564 EDEIANPEFSVDALLLLQK 620
           E E  + ++SV+ALLLLQK
Sbjct: 99  EQESYDLDYSVEALLLLQK 117


>XP_019263250.1 PREDICTED: RNA polymerase sigma factor sigA-like isoform X2
           [Nicotiana attenuata]
          Length = 447

 Score = 85.9 bits (211), Expect = 4e-16
 Identities = 43/77 (55%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
 Frame = +3

Query: 393 HQVTSPKNLINAKRSSNYSPNFLSSRDAQSIKAVKEHVDTASS-PSNVEPWIQSSNHLED 569
           HQ  S KN+INAK+SSNYSP+++S+R  QS+KA+KEHVD AS+  S+ EPW+Q    L++
Sbjct: 35  HQFPSTKNVINAKKSSNYSPSYVSNRKKQSVKALKEHVDIASNRDSDTEPWVQMFKQLQN 94

Query: 570 EIANPEFSVDALLLLQK 620
              + E SV+ LLLLQK
Sbjct: 95  GSCSEEDSVEVLLLLQK 111


>KJB44352.1 hypothetical protein B456_007G247500 [Gossypium raimondii]
           KJB44353.1 hypothetical protein B456_007G247500
           [Gossypium raimondii]
          Length = 453

 Score = 85.9 bits (211), Expect = 4e-16
 Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
 Frame = +3

Query: 387 SHHQVTSPKNLINAKRSSNYSPNFLSS-RDAQSIKAVKEHVDTASSPSNVEPWIQSSNHL 563
           S++Q  S K L+ AKRSSN S N  SS R  QSIKA KEHVDTASS S VEPWI  +N L
Sbjct: 39  SYYQTPSTKTLMVAKRSSNCSQNLPSSNRHTQSIKAFKEHVDTASSISTVEPWIHGTNDL 98

Query: 564 EDEIANPEFSVDALLLLQK 620
           E E  + ++SV+ALLLLQK
Sbjct: 99  EQESYDLDYSVEALLLLQK 117


>XP_019263249.1 PREDICTED: RNA polymerase sigma factor sigA-like isoform X1
           [Nicotiana attenuata] OIT37280.1 rna polymerase sigma
           factor siga [Nicotiana attenuata]
          Length = 504

 Score = 85.9 bits (211), Expect = 5e-16
 Identities = 43/77 (55%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
 Frame = +3

Query: 393 HQVTSPKNLINAKRSSNYSPNFLSSRDAQSIKAVKEHVDTASS-PSNVEPWIQSSNHLED 569
           HQ  S KN+INAK+SSNYSP+++S+R  QS+KA+KEHVD AS+  S+ EPW+Q    L++
Sbjct: 35  HQFPSTKNVINAKKSSNYSPSYVSNRKKQSVKALKEHVDIASNRDSDTEPWVQMFKQLQN 94

Query: 570 EIANPEFSVDALLLLQK 620
              + E SV+ LLLLQK
Sbjct: 95  GSCSEEDSVEVLLLLQK 111


>XP_016697692.1 PREDICTED: RNA polymerase sigma factor sigA-like isoform X2
           [Gossypium hirsutum]
          Length = 508

 Score = 85.9 bits (211), Expect = 5e-16
 Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
 Frame = +3

Query: 387 SHHQVTSPKNLINAKRSSNYSPNFLSS-RDAQSIKAVKEHVDTASSPSNVEPWIQSSNHL 563
           S++Q  S K L+ AKRSSN S N  SS R  QSIKA KEHVDTASS S VEPWI  +N L
Sbjct: 39  SYYQTPSTKTLMVAKRSSNCSQNLPSSNRHTQSIKAFKEHVDTASSISTVEPWIHGTNDL 98

Query: 564 EDEIANPEFSVDALLLLQK 620
           E E  + ++SV+ALLLLQK
Sbjct: 99  EQESYDLDYSVEALLLLQK 117


>XP_012492333.1 PREDICTED: RNA polymerase sigma factor sigA-like isoform X2
           [Gossypium raimondii] KJB44350.1 hypothetical protein
           B456_007G247500 [Gossypium raimondii]
          Length = 508

 Score = 85.9 bits (211), Expect = 5e-16
 Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
 Frame = +3

Query: 387 SHHQVTSPKNLINAKRSSNYSPNFLSS-RDAQSIKAVKEHVDTASSPSNVEPWIQSSNHL 563
           S++Q  S K L+ AKRSSN S N  SS R  QSIKA KEHVDTASS S VEPWI  +N L
Sbjct: 39  SYYQTPSTKTLMVAKRSSNCSQNLPSSNRHTQSIKAFKEHVDTASSISTVEPWIHGTNDL 98

Query: 564 EDEIANPEFSVDALLLLQK 620
           E E  + ++SV+ALLLLQK
Sbjct: 99  EQESYDLDYSVEALLLLQK 117


>XP_016697690.1 PREDICTED: RNA polymerase sigma factor sigA-like isoform X1
           [Gossypium hirsutum] XP_016697691.1 PREDICTED: RNA
           polymerase sigma factor sigA-like isoform X1 [Gossypium
           hirsutum]
          Length = 535

 Score = 85.9 bits (211), Expect = 5e-16
 Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
 Frame = +3

Query: 387 SHHQVTSPKNLINAKRSSNYSPNFLSS-RDAQSIKAVKEHVDTASSPSNVEPWIQSSNHL 563
           S++Q  S K L+ AKRSSN S N  SS R  QSIKA KEHVDTASS S VEPWI  +N L
Sbjct: 39  SYYQTPSTKTLMVAKRSSNCSQNLPSSNRHTQSIKAFKEHVDTASSISTVEPWIHGTNDL 98

Query: 564 EDEIANPEFSVDALLLLQK 620
           E E  + ++SV+ALLLLQK
Sbjct: 99  EQESYDLDYSVEALLLLQK 117


>XP_012492331.1 PREDICTED: RNA polymerase sigma factor sigA-like isoform X1
           [Gossypium raimondii] XP_012492332.1 PREDICTED: RNA
           polymerase sigma factor sigA-like isoform X1 [Gossypium
           raimondii] KJB44354.1 hypothetical protein
           B456_007G247500 [Gossypium raimondii]
          Length = 535

 Score = 85.9 bits (211), Expect = 5e-16
 Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
 Frame = +3

Query: 387 SHHQVTSPKNLINAKRSSNYSPNFLSS-RDAQSIKAVKEHVDTASSPSNVEPWIQSSNHL 563
           S++Q  S K L+ AKRSSN S N  SS R  QSIKA KEHVDTASS S VEPWI  +N L
Sbjct: 39  SYYQTPSTKTLMVAKRSSNCSQNLPSSNRHTQSIKAFKEHVDTASSISTVEPWIHGTNDL 98

Query: 564 EDEIANPEFSVDALLLLQK 620
           E E  + ++SV+ALLLLQK
Sbjct: 99  EQESYDLDYSVEALLLLQK 117


>XP_007029767.2 PREDICTED: RNA polymerase sigma factor sigA isoform X2 [Theobroma
           cacao]
          Length = 450

 Score = 85.5 bits (210), Expect = 6e-16
 Identities = 49/79 (62%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
 Frame = +3

Query: 387 SHHQVTSPKNLINAKRSSNYSPNFLSS-RDAQSIKAVKEHVDTASSPSNVEPWIQSSNHL 563
           SHHQ +S K+LI AK+SSN S +  SS R AQSIKA+KEHVD+AS  S  EP  Q SNHL
Sbjct: 39  SHHQTSSTKSLIVAKKSSNCSQSLPSSNRRAQSIKALKEHVDSASIVSTAEPLFQGSNHL 98

Query: 564 EDEIANPEFSVDALLLLQK 620
           E E  + ++SV+ALLLLQK
Sbjct: 99  EVESYDLDYSVEALLLLQK 117