BLASTX nr result

ID: Panax25_contig00003413 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00003413
         (528 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

OMO62138.1 hypothetical protein COLO4_33201 [Corchorus olitorius]      62   2e-11
EEF27072.1 conserved hypothetical protein [Ricinus communis]           55   3e-07

>OMO62138.1 hypothetical protein COLO4_33201 [Corchorus olitorius]
          Length = 101

 Score = 62.0 bits (149), Expect(2) = 2e-11
 Identities = 29/41 (70%), Positives = 32/41 (78%)
 Frame = -2

Query: 224 PPR*SSSDAARDKFSFKPLSFGSDKSCPFGQFAQVVFPYLP 102
           PPR SSS+AA D+  FK LSFGSDK   FG+FAQVVFPY P
Sbjct: 43  PPRRSSSNAAHDRLRFKALSFGSDKKSTFGRFAQVVFPYFP 83



 Score = 34.3 bits (77), Expect(2) = 2e-11
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -3

Query: 115 FLIFPKRSELFWFEKGA 65
           F  FP+RSELFWFEKGA
Sbjct: 79  FPYFPQRSELFWFEKGA 95


>EEF27072.1 conserved hypothetical protein [Ricinus communis]
          Length = 63

 Score = 55.1 bits (131), Expect = 3e-07
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = -2

Query: 209 SSDAARDKFSFKPLSFGSDKSCPFGQFAQV 120
           +SDAARD+ SFKPLSFGSDKS PFG+FAQV
Sbjct: 5   ASDAARDRLSFKPLSFGSDKSSPFGRFAQV 34


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