BLASTX nr result

ID: Panax25_contig00003412 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00003412
         (539 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_019251833.1 PREDICTED: probable RNA polymerase II transcripti...    78   2e-13
XP_009758565.1 PREDICTED: probable RNA polymerase II transcripti...    78   2e-13
KZM94354.1 hypothetical protein DCAR_017597 [Daucus carota subsp...    77   2e-13
XP_017252565.1 PREDICTED: probable RNA polymerase II transcripti...    77   2e-13
KHN00998.1 Putative RNA polymerase II transcription factor B sub...    70   5e-12
XP_018626690.1 PREDICTED: probable RNA polymerase II transcripti...    73   6e-12
XP_011097710.1 PREDICTED: probable RNA polymerase II transcripti...    73   6e-12
XP_011097709.1 PREDICTED: probable RNA polymerase II transcripti...    73   6e-12
XP_009602018.1 PREDICTED: probable RNA polymerase II transcripti...    73   6e-12
XP_011097708.1 PREDICTED: probable RNA polymerase II transcripti...    73   6e-12
XP_010092370.1 hypothetical protein L484_023748 [Morus notabilis...    72   1e-11
XP_010327201.1 PREDICTED: probable RNA polymerase II transcripti...    72   1e-11
KOM52404.1 hypothetical protein LR48_Vigan09g106300 [Vigna angul...    71   3e-11
XP_016196876.1 PREDICTED: LOW QUALITY PROTEIN: probable RNA poly...    71   3e-11
XP_015958879.1 PREDICTED: probable RNA polymerase II transcripti...    71   3e-11
XP_019441065.1 PREDICTED: probable RNA polymerase II transcripti...    71   3e-11
XP_017436961.1 PREDICTED: probable RNA polymerase II transcripti...    71   3e-11
XP_014514406.1 PREDICTED: probable RNA polymerase II transcripti...    71   3e-11
XP_015088806.1 PREDICTED: probable RNA polymerase II transcripti...    71   4e-11
XP_004248296.1 PREDICTED: probable RNA polymerase II transcripti...    71   4e-11

>XP_019251833.1 PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 [Nicotiana attenuata]
          Length = 599

 Score = 77.8 bits (190), Expect = 2e-13
 Identities = 35/45 (77%), Positives = 41/45 (91%)
 Frame = -2

Query: 136 MADGQVIKRAKYKSSVKDPGTPGVLTMTKEKFVFMPSDPRSSTKL 2
           MADG+V+KRAKYKSSVKDPG PGVL +TKE+F FMP+DP S+TKL
Sbjct: 1   MADGKVVKRAKYKSSVKDPGVPGVLKLTKERFFFMPNDPTSTTKL 45


>XP_009758565.1 PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X1 [Nicotiana sylvestris]
           XP_016465826.1 PREDICTED: probable RNA polymerase II
           transcription factor B subunit 1-1 [Nicotiana tabacum]
          Length = 599

 Score = 77.8 bits (190), Expect = 2e-13
 Identities = 35/45 (77%), Positives = 41/45 (91%)
 Frame = -2

Query: 136 MADGQVIKRAKYKSSVKDPGTPGVLTMTKEKFVFMPSDPRSSTKL 2
           MADG+V+KRAKYKSSVKDPG PGVL +TKE+F FMP+DP S+TKL
Sbjct: 1   MADGKVVKRAKYKSSVKDPGVPGVLKLTKERFFFMPNDPTSTTKL 45


>KZM94354.1 hypothetical protein DCAR_017597 [Daucus carota subsp. sativus]
          Length = 592

 Score = 77.4 bits (189), Expect = 2e-13
 Identities = 36/45 (80%), Positives = 41/45 (91%)
 Frame = -2

Query: 136 MADGQVIKRAKYKSSVKDPGTPGVLTMTKEKFVFMPSDPRSSTKL 2
           M++ QVIKRAKYKSS+KDPGTPGVLTM +E+FVFMPSDPRS  KL
Sbjct: 1   MSERQVIKRAKYKSSIKDPGTPGVLTMKRERFVFMPSDPRSLMKL 45


>XP_017252565.1 PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 [Daucus carota subsp. sativus]
          Length = 601

 Score = 77.4 bits (189), Expect = 2e-13
 Identities = 36/45 (80%), Positives = 41/45 (91%)
 Frame = -2

Query: 136 MADGQVIKRAKYKSSVKDPGTPGVLTMTKEKFVFMPSDPRSSTKL 2
           M++ QVIKRAKYKSS+KDPGTPGVLTM +E+FVFMPSDPRS  KL
Sbjct: 1   MSERQVIKRAKYKSSIKDPGTPGVLTMKRERFVFMPSDPRSLMKL 45


>KHN00998.1 Putative RNA polymerase II transcription factor B subunit 1-1
           [Glycine soja]
          Length = 160

 Score = 70.1 bits (170), Expect = 5e-12
 Identities = 31/45 (68%), Positives = 39/45 (86%)
 Frame = -2

Query: 136 MADGQVIKRAKYKSSVKDPGTPGVLTMTKEKFVFMPSDPRSSTKL 2
           M+  QV+KRAKYK++VKDPGTPGVL +T++KFVF P+DP S TKL
Sbjct: 1   MSSRQVVKRAKYKTTVKDPGTPGVLKLTQDKFVFKPNDPTSKTKL 45


>XP_018626690.1 PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X2 [Nicotiana tomentosiformis]
          Length = 584

 Score = 73.2 bits (178), Expect = 6e-12
 Identities = 33/45 (73%), Positives = 39/45 (86%)
 Frame = -2

Query: 136 MADGQVIKRAKYKSSVKDPGTPGVLTMTKEKFVFMPSDPRSSTKL 2
           MADG+V+KR KYKSSVKDPG  GVL +TKE+F FMP+DP S+TKL
Sbjct: 1   MADGKVVKRVKYKSSVKDPGVSGVLKLTKERFFFMPNDPTSTTKL 45


>XP_011097710.1 PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X3 [Sesamum indicum]
          Length = 591

 Score = 73.2 bits (178), Expect = 6e-12
 Identities = 35/45 (77%), Positives = 40/45 (88%)
 Frame = -2

Query: 136 MADGQVIKRAKYKSSVKDPGTPGVLTMTKEKFVFMPSDPRSSTKL 2
           MAD QVIKRAKYKSSVKDPG  GVL M+ E+FVFMP+DP+S+TKL
Sbjct: 1   MADKQVIKRAKYKSSVKDPGVAGVLKMSIERFVFMPNDPKSTTKL 45


>XP_011097709.1 PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X2 [Sesamum indicum]
          Length = 592

 Score = 73.2 bits (178), Expect = 6e-12
 Identities = 35/45 (77%), Positives = 40/45 (88%)
 Frame = -2

Query: 136 MADGQVIKRAKYKSSVKDPGTPGVLTMTKEKFVFMPSDPRSSTKL 2
           MAD QVIKRAKYKSSVKDPG  GVL M+ E+FVFMP+DP+S+TKL
Sbjct: 1   MADKQVIKRAKYKSSVKDPGVAGVLKMSIERFVFMPNDPKSTTKL 45


>XP_009602018.1 PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X1 [Nicotiana tomentosiformis]
          Length = 599

 Score = 73.2 bits (178), Expect = 6e-12
 Identities = 33/45 (73%), Positives = 39/45 (86%)
 Frame = -2

Query: 136 MADGQVIKRAKYKSSVKDPGTPGVLTMTKEKFVFMPSDPRSSTKL 2
           MADG+V+KR KYKSSVKDPG  GVL +TKE+F FMP+DP S+TKL
Sbjct: 1   MADGKVVKRVKYKSSVKDPGVSGVLKLTKERFFFMPNDPTSTTKL 45


>XP_011097708.1 PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X1 [Sesamum indicum]
          Length = 600

 Score = 73.2 bits (178), Expect = 6e-12
 Identities = 35/45 (77%), Positives = 40/45 (88%)
 Frame = -2

Query: 136 MADGQVIKRAKYKSSVKDPGTPGVLTMTKEKFVFMPSDPRSSTKL 2
           MAD QVIKRAKYKSSVKDPG  GVL M+ E+FVFMP+DP+S+TKL
Sbjct: 1   MADKQVIKRAKYKSSVKDPGVAGVLKMSIERFVFMPNDPKSTTKL 45


>XP_010092370.1 hypothetical protein L484_023748 [Morus notabilis] EXB51046.1
           hypothetical protein L484_023748 [Morus notabilis]
          Length = 557

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 33/45 (73%), Positives = 40/45 (88%)
 Frame = -2

Query: 136 MADGQVIKRAKYKSSVKDPGTPGVLTMTKEKFVFMPSDPRSSTKL 2
           M+ G+VIKRAKYK+SVKDPGTPGVL MT++KF+F P+DP S TKL
Sbjct: 1   MSSGEVIKRAKYKTSVKDPGTPGVLKMTEQKFLFNPNDPSSVTKL 45


>XP_010327201.1 PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X1 [Solanum lycopersicum]
          Length = 608

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 33/46 (71%), Positives = 40/46 (86%)
 Frame = -2

Query: 139 SMADGQVIKRAKYKSSVKDPGTPGVLTMTKEKFVFMPSDPRSSTKL 2
           SMADG+V+KRAKYK+SVK PG PGVL +TKE+F FMP+DP  +TKL
Sbjct: 9   SMADGKVVKRAKYKTSVKVPGVPGVLKLTKERFYFMPNDPTLTTKL 54


>KOM52404.1 hypothetical protein LR48_Vigan09g106300 [Vigna angularis]
          Length = 557

 Score = 71.2 bits (173), Expect = 3e-11
 Identities = 31/45 (68%), Positives = 39/45 (86%)
 Frame = -2

Query: 136 MADGQVIKRAKYKSSVKDPGTPGVLTMTKEKFVFMPSDPRSSTKL 2
           M+ GQV+KR KYK++VKDPGTPGVL +T+EKFVF P+DP S+ KL
Sbjct: 1   MSSGQVVKRVKYKATVKDPGTPGVLRLTQEKFVFKPNDPTSNNKL 45


>XP_016196876.1 PREDICTED: LOW QUALITY PROTEIN: probable RNA polymerase II
           transcription factor B subunit 1-1 [Arachis ipaensis]
          Length = 584

 Score = 71.2 bits (173), Expect = 3e-11
 Identities = 30/45 (66%), Positives = 40/45 (88%)
 Frame = -2

Query: 136 MADGQVIKRAKYKSSVKDPGTPGVLTMTKEKFVFMPSDPRSSTKL 2
           M+ G+V+K+AKYK++VKDPGTPG+L +T+EKFVF P+DP SS KL
Sbjct: 1   MSSGKVVKKAKYKATVKDPGTPGILVLTEEKFVFKPNDPTSSNKL 45


>XP_015958879.1 PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 [Arachis duranensis]
          Length = 584

 Score = 71.2 bits (173), Expect = 3e-11
 Identities = 30/45 (66%), Positives = 40/45 (88%)
 Frame = -2

Query: 136 MADGQVIKRAKYKSSVKDPGTPGVLTMTKEKFVFMPSDPRSSTKL 2
           M+ G+V+K+AKYK++VKDPGTPG+L +T+EKFVF P+DP SS KL
Sbjct: 1   MSSGKVVKKAKYKATVKDPGTPGILVLTEEKFVFKPNDPTSSNKL 45


>XP_019441065.1 PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X1 [Lupinus angustifolius]
           OIW13153.1 hypothetical protein TanjilG_09187 [Lupinus
           angustifolius]
          Length = 586

 Score = 71.2 bits (173), Expect = 3e-11
 Identities = 31/45 (68%), Positives = 39/45 (86%)
 Frame = -2

Query: 136 MADGQVIKRAKYKSSVKDPGTPGVLTMTKEKFVFMPSDPRSSTKL 2
           M+ GQVIKRAKYK++VKDPGTPGV+ +T+EKF+F P+DP S  KL
Sbjct: 1   MSSGQVIKRAKYKTTVKDPGTPGVIKLTEEKFIFRPNDPTSHNKL 45


>XP_017436961.1 PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 [Vigna angularis] BAT94655.1 hypothetical
           protein VIGAN_08127600 [Vigna angularis var. angularis]
          Length = 589

 Score = 71.2 bits (173), Expect = 3e-11
 Identities = 31/45 (68%), Positives = 39/45 (86%)
 Frame = -2

Query: 136 MADGQVIKRAKYKSSVKDPGTPGVLTMTKEKFVFMPSDPRSSTKL 2
           M+ GQV+KR KYK++VKDPGTPGVL +T+EKFVF P+DP S+ KL
Sbjct: 1   MSSGQVVKRVKYKATVKDPGTPGVLRLTQEKFVFKPNDPTSNNKL 45


>XP_014514406.1 PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 [Vigna radiata var. radiata]
          Length = 589

 Score = 71.2 bits (173), Expect = 3e-11
 Identities = 31/45 (68%), Positives = 39/45 (86%)
 Frame = -2

Query: 136 MADGQVIKRAKYKSSVKDPGTPGVLTMTKEKFVFMPSDPRSSTKL 2
           M+ GQV+KR KYK++VKDPGTPGVL +T+EKFVF P+DP S+ KL
Sbjct: 1   MSSGQVVKRVKYKATVKDPGTPGVLRLTQEKFVFKPNDPTSNNKL 45


>XP_015088806.1 PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 [Solanum pennellii]
          Length = 599

 Score = 70.9 bits (172), Expect = 4e-11
 Identities = 32/45 (71%), Positives = 39/45 (86%)
 Frame = -2

Query: 136 MADGQVIKRAKYKSSVKDPGTPGVLTMTKEKFVFMPSDPRSSTKL 2
           MADG+V+KRAKYK+SVK PG PGVL +TKE+F FMP+DP  +TKL
Sbjct: 1   MADGKVVKRAKYKTSVKVPGVPGVLKLTKERFYFMPNDPTLTTKL 45


>XP_004248296.1 PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X2 [Solanum lycopersicum]
          Length = 599

 Score = 70.9 bits (172), Expect = 4e-11
 Identities = 32/45 (71%), Positives = 39/45 (86%)
 Frame = -2

Query: 136 MADGQVIKRAKYKSSVKDPGTPGVLTMTKEKFVFMPSDPRSSTKL 2
           MADG+V+KRAKYK+SVK PG PGVL +TKE+F FMP+DP  +TKL
Sbjct: 1   MADGKVVKRAKYKTSVKVPGVPGVLKLTKERFYFMPNDPTLTTKL 45


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