BLASTX nr result

ID: Panax25_contig00003406 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00003406
         (718 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017244602.1 PREDICTED: putative F-box protein At1g49610 [Dauc...    88   2e-16

>XP_017244602.1 PREDICTED: putative F-box protein At1g49610 [Daucus carota subsp.
           sativus] XP_017244603.1 PREDICTED: putative F-box
           protein At1g49610 [Daucus carota subsp. sativus]
           KZM99655.1 hypothetical protein DCAR_012983 [Daucus
           carota subsp. sativus]
          Length = 499

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 51/115 (44%), Positives = 66/115 (57%), Gaps = 4/115 (3%)
 Frame = -1

Query: 715 DDLRVGISRIHEDNYWNDETWLKSFDFNEEHYFDSQPAFSCLRNHLNTVKIRGCXXXXXX 536
           D L VG+S I     WNDE WL   +   EHYF+++P+FSCL N+L TV+I G       
Sbjct: 383 DSLHVGMSDIFRWEGWNDENWLDESEIGFEHYFETEPSFSCLTNYLRTVRISGARISNCS 442

Query: 535 XXXXXXXLRYSAVLERMEICMK--QSYPSQSSS--AEFSRKLSTCRKASASAMIV 383
                  L  + VLERMEI ++   +Y S SS+   + S  LSTCRKAS S +IV
Sbjct: 443 LHLVKFLLENAVVLERMEILIRNFNAYSSTSSAELLKLSNLLSTCRKASPSTIIV 497


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