BLASTX nr result
ID: Panax25_contig00003156
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00003156
(675 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CBI29080.3 unnamed protein product, partial [Vitis vinifera] 89 2e-17
XP_002530460.1 PREDICTED: mediator of RNA polymerase II transcri... 90 4e-17
XP_007135778.1 hypothetical protein PHAVU_010G1579001g, partial ... 87 4e-17
XP_007023331.2 PREDICTED: mediator of RNA polymerase II transcri... 90 5e-17
EOY25953.1 Uncharacterized protein TCM_027312 [Theobroma cacao] 90 5e-17
XP_017978587.1 PREDICTED: mediator of RNA polymerase II transcri... 90 5e-17
OMP01462.1 hypothetical protein COLO4_11847 [Corchorus olitorius] 89 7e-17
OMO54456.1 putative transcription cofactor [Corchorus capsularis] 89 7e-17
CDP19429.1 unnamed protein product [Coffea canephora] 89 7e-17
CBI32831.3 unnamed protein product, partial [Vitis vinifera] 87 7e-17
XP_011087375.1 PREDICTED: mediator of RNA polymerase II transcri... 89 9e-17
XP_011087374.1 PREDICTED: mediator of RNA polymerase II transcri... 89 9e-17
XP_019079890.1 PREDICTED: mediator of RNA polymerase II transcri... 89 9e-17
XP_002322595.1 hypothetical protein POPTR_0016s02810g [Populus t... 89 1e-16
XP_016749695.1 PREDICTED: mediator of RNA polymerase II transcri... 89 1e-16
XP_008218603.1 PREDICTED: mediator of RNA polymerase II transcri... 89 1e-16
ONH99377.1 hypothetical protein PRUPE_6G027500 [Prunus persica] 89 1e-16
ONH99379.1 hypothetical protein PRUPE_6G027500 [Prunus persica] 89 1e-16
ONH99378.1 hypothetical protein PRUPE_6G027500 [Prunus persica] 89 1e-16
XP_007208137.1 hypothetical protein PRUPE_ppa000277mg [Prunus pe... 89 1e-16
>CBI29080.3 unnamed protein product, partial [Vitis vinifera]
Length = 300
Score = 89.0 bits (219), Expect = 2e-17
Identities = 38/69 (55%), Positives = 55/69 (79%)
Frame = +1
Query: 346 SKNAKDVIKNLKMKFNLSMRTLSEPVSLGEMARTWDACARAVFLEFAEQIGGKPFSSRFG 525
SK +D+ K +F++S+R+LS+P+SLGE+ARTWD CARAV E+A+Q GG FSSR+G
Sbjct: 232 SKEYEDLSVKAKSRFSISLRSLSQPMSLGEIARTWDVCARAVISEYAQQSGGGSFSSRYG 291
Query: 526 TWKNCITAS 552
W+NC++A+
Sbjct: 292 AWENCLSAA 300
>XP_002530460.1 PREDICTED: mediator of RNA polymerase II transcription subunit 15a
[Ricinus communis] XP_015581649.1 PREDICTED: mediator of
RNA polymerase II transcription subunit 15a [Ricinus
communis] EEF31930.1 transcription cofactor, putative
[Ricinus communis]
Length = 1382
Score = 90.1 bits (222), Expect = 4e-17
Identities = 39/69 (56%), Positives = 55/69 (79%)
Frame = +1
Query: 346 SKNAKDVIKNLKMKFNLSMRTLSEPVSLGEMARTWDACARAVFLEFAEQIGGKPFSSRFG 525
SK +D+ K +FN+S+R+LS+P+SLGE+ARTWD CARAV E A+Q GG FSS++G
Sbjct: 1314 SKEYEDLSVKAKSRFNISLRSLSQPMSLGEIARTWDVCARAVISEHAQQSGGGSFSSKYG 1373
Query: 526 TWKNCITAS 552
TW+NC++A+
Sbjct: 1374 TWENCLSAA 1382
>XP_007135778.1 hypothetical protein PHAVU_010G1579001g, partial [Phaseolus
vulgaris] ESW07772.1 hypothetical protein
PHAVU_010G1579001g, partial [Phaseolus vulgaris]
Length = 278
Score = 87.4 bits (215), Expect = 4e-17
Identities = 37/69 (53%), Positives = 54/69 (78%)
Frame = +1
Query: 346 SKNAKDVIKNLKMKFNLSMRTLSEPVSLGEMARTWDACARAVFLEFAEQIGGKPFSSRFG 525
SK +D+ K KF++S+R+LS+P+SLG++ARTWD CAR+V E A+Q GG FSS++G
Sbjct: 210 SKENEDLSAKTKAKFSISLRSLSQPMSLGDIARTWDVCARSVISEHAQQSGGGSFSSKYG 269
Query: 526 TWKNCITAS 552
TW+NC+T +
Sbjct: 270 TWENCLTTN 278
>XP_007023331.2 PREDICTED: mediator of RNA polymerase II transcription subunit 15a
isoform X2 [Theobroma cacao]
Length = 1367
Score = 89.7 bits (221), Expect = 5e-17
Identities = 39/69 (56%), Positives = 55/69 (79%)
Frame = +1
Query: 346 SKNAKDVIKNLKMKFNLSMRTLSEPVSLGEMARTWDACARAVFLEFAEQIGGKPFSSRFG 525
SK +D+ K +F++S+RTLS+P+SLGE+ARTWD CARAV E A+Q GG FSS++G
Sbjct: 1299 SKEYEDLSVKAKSRFSISLRTLSQPMSLGEIARTWDVCARAVISEHAQQSGGGSFSSKYG 1358
Query: 526 TWKNCITAS 552
TW+NC++A+
Sbjct: 1359 TWENCLSAA 1367
>EOY25953.1 Uncharacterized protein TCM_027312 [Theobroma cacao]
Length = 1367
Score = 89.7 bits (221), Expect = 5e-17
Identities = 39/69 (56%), Positives = 55/69 (79%)
Frame = +1
Query: 346 SKNAKDVIKNLKMKFNLSMRTLSEPVSLGEMARTWDACARAVFLEFAEQIGGKPFSSRFG 525
SK +D+ K +F++S+RTLS+P+SLGE+ARTWD CARAV E A+Q GG FSS++G
Sbjct: 1299 SKEYEDLSVKAKSRFSISLRTLSQPMSLGEIARTWDVCARAVISEHAQQSGGGSFSSKYG 1358
Query: 526 TWKNCITAS 552
TW+NC++A+
Sbjct: 1359 TWENCLSAA 1367
>XP_017978587.1 PREDICTED: mediator of RNA polymerase II transcription subunit 15a
isoform X1 [Theobroma cacao] XP_017978588.1 PREDICTED:
mediator of RNA polymerase II transcription subunit 15a
isoform X1 [Theobroma cacao]
Length = 1371
Score = 89.7 bits (221), Expect = 5e-17
Identities = 39/69 (56%), Positives = 55/69 (79%)
Frame = +1
Query: 346 SKNAKDVIKNLKMKFNLSMRTLSEPVSLGEMARTWDACARAVFLEFAEQIGGKPFSSRFG 525
SK +D+ K +F++S+RTLS+P+SLGE+ARTWD CARAV E A+Q GG FSS++G
Sbjct: 1303 SKEYEDLSVKAKSRFSISLRTLSQPMSLGEIARTWDVCARAVISEHAQQSGGGSFSSKYG 1362
Query: 526 TWKNCITAS 552
TW+NC++A+
Sbjct: 1363 TWENCLSAA 1371
>OMP01462.1 hypothetical protein COLO4_11847 [Corchorus olitorius]
Length = 1227
Score = 89.4 bits (220), Expect = 7e-17
Identities = 39/69 (56%), Positives = 55/69 (79%)
Frame = +1
Query: 346 SKNAKDVIKNLKMKFNLSMRTLSEPVSLGEMARTWDACARAVFLEFAEQIGGKPFSSRFG 525
SK +D+ K +F++S+RTLS+P+SLGE+ARTWD CARAV E A+Q GG FSS++G
Sbjct: 1159 SKEYEDLSVKAKSRFSISLRTLSQPMSLGEIARTWDICARAVISEHAQQSGGGSFSSKYG 1218
Query: 526 TWKNCITAS 552
TW+NC++A+
Sbjct: 1219 TWENCLSAA 1227
>OMO54456.1 putative transcription cofactor [Corchorus capsularis]
Length = 1345
Score = 89.4 bits (220), Expect = 7e-17
Identities = 39/69 (56%), Positives = 55/69 (79%)
Frame = +1
Query: 346 SKNAKDVIKNLKMKFNLSMRTLSEPVSLGEMARTWDACARAVFLEFAEQIGGKPFSSRFG 525
SK +D+ K +F++S+RTLS+P+SLGE+ARTWD CARAV E A+Q GG FSS++G
Sbjct: 1277 SKEYEDLSVKAKSRFSISLRTLSQPMSLGEIARTWDICARAVISEHAQQSGGGSFSSKYG 1336
Query: 526 TWKNCITAS 552
TW+NC++A+
Sbjct: 1337 TWENCLSAA 1345
>CDP19429.1 unnamed protein product [Coffea canephora]
Length = 1398
Score = 89.4 bits (220), Expect = 7e-17
Identities = 39/68 (57%), Positives = 54/68 (79%)
Frame = +1
Query: 346 SKNAKDVIKNLKMKFNLSMRTLSEPVSLGEMARTWDACARAVFLEFAEQIGGKPFSSRFG 525
SK +D+ + KF++S+R+LS+P+SL EMARTWD CARAV EFA+Q GG FSS++G
Sbjct: 1330 SKEYEDLSIKARSKFSISLRSLSQPMSLSEMARTWDICARAVISEFAQQSGGGTFSSKYG 1389
Query: 526 TWKNCITA 549
TW+NC++A
Sbjct: 1390 TWENCVSA 1397
>CBI32831.3 unnamed protein product, partial [Vitis vinifera]
Length = 313
Score = 87.4 bits (215), Expect = 7e-17
Identities = 37/75 (49%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Frame = +1
Query: 334 YSWCS--KNAKDVIKNLKMKFNLSMRTLSEPVSLGEMARTWDACARAVFLEFAEQIGGKP 507
+ W S K +D+ + + +FNLS+R LS+P+SL EMA+TW+ CA +VF E+A+ +GG+
Sbjct: 239 FDWSSNRKEHEDLSQKARSRFNLSLRNLSQPMSLTEMAKTWEVCAHSVFYEYAQLMGGEC 298
Query: 508 FSSRFGTWKNCITAS 552
F+SR+GTW+NC+ AS
Sbjct: 299 FTSRYGTWENCVVAS 313
>XP_011087375.1 PREDICTED: mediator of RNA polymerase II transcription subunit 15a
isoform X2 [Sesamum indicum]
Length = 1372
Score = 89.0 bits (219), Expect = 9e-17
Identities = 39/69 (56%), Positives = 55/69 (79%)
Frame = +1
Query: 346 SKNAKDVIKNLKMKFNLSMRTLSEPVSLGEMARTWDACARAVFLEFAEQIGGKPFSSRFG 525
SK +D+ K KF++S+R L++P+SLGE+ARTWD CARAV E+AEQ GG FSS++G
Sbjct: 1304 SKEYEDLSIKAKSKFSISLRALAQPMSLGEIARTWDNCARAVISEYAEQSGGGNFSSKYG 1363
Query: 526 TWKNCITAS 552
TW+NC++A+
Sbjct: 1364 TWENCLSAA 1372
>XP_011087374.1 PREDICTED: mediator of RNA polymerase II transcription subunit 15a
isoform X1 [Sesamum indicum]
Length = 1375
Score = 89.0 bits (219), Expect = 9e-17
Identities = 39/69 (56%), Positives = 55/69 (79%)
Frame = +1
Query: 346 SKNAKDVIKNLKMKFNLSMRTLSEPVSLGEMARTWDACARAVFLEFAEQIGGKPFSSRFG 525
SK +D+ K KF++S+R L++P+SLGE+ARTWD CARAV E+AEQ GG FSS++G
Sbjct: 1307 SKEYEDLSIKAKSKFSISLRALAQPMSLGEIARTWDNCARAVISEYAEQSGGGNFSSKYG 1366
Query: 526 TWKNCITAS 552
TW+NC++A+
Sbjct: 1367 TWENCLSAA 1375
>XP_019079890.1 PREDICTED: mediator of RNA polymerase II transcription subunit 15a
[Vitis vinifera]
Length = 1389
Score = 89.0 bits (219), Expect = 9e-17
Identities = 38/69 (55%), Positives = 55/69 (79%)
Frame = +1
Query: 346 SKNAKDVIKNLKMKFNLSMRTLSEPVSLGEMARTWDACARAVFLEFAEQIGGKPFSSRFG 525
SK +D+ K +F++S+R+LS+P+SLGE+ARTWD CARAV E+A+Q GG FSSR+G
Sbjct: 1321 SKEYEDLSVKAKSRFSISLRSLSQPMSLGEIARTWDVCARAVISEYAQQSGGGSFSSRYG 1380
Query: 526 TWKNCITAS 552
W+NC++A+
Sbjct: 1381 AWENCLSAA 1389
>XP_002322595.1 hypothetical protein POPTR_0016s02810g [Populus trichocarpa]
EEF04356.1 hypothetical protein POPTR_0016s02810g
[Populus trichocarpa]
Length = 916
Score = 88.6 bits (218), Expect = 1e-16
Identities = 40/73 (54%), Positives = 57/73 (78%)
Frame = +1
Query: 331 LYSWCSKNAKDVIKNLKMKFNLSMRTLSEPVSLGEMARTWDACARAVFLEFAEQIGGKPF 510
L S S +D+ + K++F++++R LSEP+SL E+ARTWDACARAV LE + +GG+ F
Sbjct: 844 LPSGLSDELEDLSEKTKLRFSVALRNLSEPMSLLEIARTWDACARAVLLEHVKPLGGECF 903
Query: 511 SSRFGTWKNCITA 549
SSR+GTW+NC+TA
Sbjct: 904 SSRYGTWENCLTA 916
>XP_016749695.1 PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like [Gossypium hirsutum]
Length = 953
Score = 88.6 bits (218), Expect = 1e-16
Identities = 39/69 (56%), Positives = 53/69 (76%)
Frame = +1
Query: 346 SKNAKDVIKNLKMKFNLSMRTLSEPVSLGEMARTWDACARAVFLEFAEQIGGKPFSSRFG 525
SK +D+ K KF++S+RTLS+P+SLGE+ARTWD CARA+ E A+Q GG FSS++G
Sbjct: 885 SKEYEDLSVKAKSKFSISLRTLSQPMSLGEIARTWDVCARAIISEHAQQSGGASFSSKYG 944
Query: 526 TWKNCITAS 552
TW+NC A+
Sbjct: 945 TWENCSMAA 953
>XP_008218603.1 PREDICTED: mediator of RNA polymerase II transcription subunit 15a
[Prunus mume]
Length = 1355
Score = 88.6 bits (218), Expect = 1e-16
Identities = 38/69 (55%), Positives = 55/69 (79%)
Frame = +1
Query: 346 SKNAKDVIKNLKMKFNLSMRTLSEPVSLGEMARTWDACARAVFLEFAEQIGGKPFSSRFG 525
SK +D+ K KF++S+R++S+P+SLGE+ARTWD CARAV E A+Q GG FSS++G
Sbjct: 1287 SKEYEDLSVKAKSKFSISLRSISQPMSLGEIARTWDVCARAVISEHAQQSGGGSFSSKYG 1346
Query: 526 TWKNCITAS 552
TW+NC++A+
Sbjct: 1347 TWENCLSAA 1355
>ONH99377.1 hypothetical protein PRUPE_6G027500 [Prunus persica]
Length = 1356
Score = 88.6 bits (218), Expect = 1e-16
Identities = 38/69 (55%), Positives = 55/69 (79%)
Frame = +1
Query: 346 SKNAKDVIKNLKMKFNLSMRTLSEPVSLGEMARTWDACARAVFLEFAEQIGGKPFSSRFG 525
SK +D+ K KF++S+R++S+P+SLGE+ARTWD CARAV E A+Q GG FSS++G
Sbjct: 1288 SKEYEDLSVKAKSKFSISLRSISQPMSLGEIARTWDVCARAVISEHAQQSGGGSFSSKYG 1347
Query: 526 TWKNCITAS 552
TW+NC++A+
Sbjct: 1348 TWENCLSAA 1356
>ONH99379.1 hypothetical protein PRUPE_6G027500 [Prunus persica]
Length = 1359
Score = 88.6 bits (218), Expect = 1e-16
Identities = 38/69 (55%), Positives = 55/69 (79%)
Frame = +1
Query: 346 SKNAKDVIKNLKMKFNLSMRTLSEPVSLGEMARTWDACARAVFLEFAEQIGGKPFSSRFG 525
SK +D+ K KF++S+R++S+P+SLGE+ARTWD CARAV E A+Q GG FSS++G
Sbjct: 1291 SKEYEDLSVKAKSKFSISLRSISQPMSLGEIARTWDVCARAVISEHAQQSGGGSFSSKYG 1350
Query: 526 TWKNCITAS 552
TW+NC++A+
Sbjct: 1351 TWENCLSAA 1359
>ONH99378.1 hypothetical protein PRUPE_6G027500 [Prunus persica]
Length = 1359
Score = 88.6 bits (218), Expect = 1e-16
Identities = 38/69 (55%), Positives = 55/69 (79%)
Frame = +1
Query: 346 SKNAKDVIKNLKMKFNLSMRTLSEPVSLGEMARTWDACARAVFLEFAEQIGGKPFSSRFG 525
SK +D+ K KF++S+R++S+P+SLGE+ARTWD CARAV E A+Q GG FSS++G
Sbjct: 1291 SKEYEDLSVKAKSKFSISLRSISQPMSLGEIARTWDVCARAVISEHAQQSGGGSFSSKYG 1350
Query: 526 TWKNCITAS 552
TW+NC++A+
Sbjct: 1351 TWENCLSAA 1359
>XP_007208137.1 hypothetical protein PRUPE_ppa000277mg [Prunus persica]
Length = 1360
Score = 88.6 bits (218), Expect = 1e-16
Identities = 38/69 (55%), Positives = 55/69 (79%)
Frame = +1
Query: 346 SKNAKDVIKNLKMKFNLSMRTLSEPVSLGEMARTWDACARAVFLEFAEQIGGKPFSSRFG 525
SK +D+ K KF++S+R++S+P+SLGE+ARTWD CARAV E A+Q GG FSS++G
Sbjct: 1292 SKEYEDLSVKAKSKFSISLRSISQPMSLGEIARTWDVCARAVISEHAQQSGGGSFSSKYG 1351
Query: 526 TWKNCITAS 552
TW+NC++A+
Sbjct: 1352 TWENCLSAA 1360