BLASTX nr result

ID: Panax25_contig00002820 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00002820
         (519 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

JAN30575.1 hypothetical protein, partial [Daphnia magna]               57   2e-07
KVI12359.1 hypothetical protein Ccrd_009232 [Cynara cardunculus ...    57   2e-06
XP_018847175.1 PREDICTED: heterogeneous nuclear ribonucleoprotei...    56   5e-06
WP_076489808.1 hypothetical protein [Spirochaeta americana]            52   6e-06
XP_010093086.1 DAZ-associated protein 1 [Morus notabilis] EXB535...    55   7e-06
OMD98969.1 hypothetical protein BSK60_33690, partial [Paenibacil...    52   8e-06

>JAN30575.1 hypothetical protein, partial [Daphnia magna]
          Length = 140

 Score = 57.4 bits (137), Expect = 2e-07
 Identities = 34/108 (31%), Positives = 43/108 (39%), Gaps = 17/108 (15%)
 Frame = -3

Query: 511 WLWC--WRIRKCQCRLWRTCW-SIWEPKWPKYW-------LCERPTQCLEKHMGKSNSWL 362
           W WC  W    C CR W   W   W   W + W        C   ++C      +S SW 
Sbjct: 16  WCWCRSWCRSWCWCRSWCRSWCRSWCRSWGRSWGWSRSRSWCRSRSRCRSWCWCRSRSWC 75

Query: 361 RN-CWLWCKCR----LWG*C-SLECARQWWWCFCTYGSISEWCF-WVW 239
           R+ C  WC+ R     W  C S   +R W WC+C       WC+ W W
Sbjct: 76  RSRCRSWCRSRSRSWSWSWCWSRSWSRSWCWCWC-------WCWCWCW 116


>KVI12359.1 hypothetical protein Ccrd_009232 [Cynara cardunculus var. scolymus]
          Length = 679

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/59 (44%), Positives = 30/59 (50%)
 Frame = -1

Query: 438 SGPNTGYASGPPSALKNTWGSQTPXXXXXXXXXXXXXXXSVPWNVQGSGGGASAPMGQS 262
           +G N+GY  G PSALK  WG Q+P               +VPWN  G G   SAPM QS
Sbjct: 274 TGANSGYVGGNPSALKTAWGGQSPGYGGTGYGPNVGYGGNVPWNTAGGGAAVSAPMSQS 332


>XP_018847175.1 PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Juglans
           regia]
          Length = 437

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 29/61 (47%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = -1

Query: 438 SGPNTGYASGPPSALKNTWGSQT-PXXXXXXXXXXXXXXXSVPWNVQGSGGGASAPMGQS 262
           + PN  Y SG P ALKNTW SQT P               +  WN  GSGG  SAP GQS
Sbjct: 276 NAPNASYGSGAPGALKNTWSSQTSPGYGASSYGGNAGFGATASWNSPGSGGPMSAPRGQS 335

Query: 261 P 259
           P
Sbjct: 336 P 336


>WP_076489808.1 hypothetical protein [Spirochaeta americana]
          Length = 70

 Score = 51.6 bits (122), Expect = 6e-06
 Identities = 31/103 (30%), Positives = 36/103 (34%), Gaps = 6/103 (5%)
 Frame = -3

Query: 517 IWWLWCWRIRKCQCRLWRT------CWSIWEPKWPKYWLCERPTQCLEKHMGKSNSWLRN 356
           +WW WCWR     C  WR       CW  W P W   WLC                WL  
Sbjct: 7   LWWCWCWRRWLWWCWCWRRWLWWCWCWRRW-PCW--CWLC----------------WLWL 47

Query: 355 CWLWCKCRLWG*CSLECARQWWWCFCTYGSISEWCFWVWDSRI 227
           CWLW                W WC+  +     WC W+W  R+
Sbjct: 48  CWLW----------------WCWCWRRWPC---WC-WLWWLRL 70


>XP_010093086.1 DAZ-associated protein 1 [Morus notabilis] EXB53514.1
           DAZ-associated protein 1 [Morus notabilis]
          Length = 429

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/61 (47%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = -1

Query: 438 SGPNTGYASGPPSALKNTWGSQTPXXXXXXXXXXXXXXXSVPWNVQGSG-GGASAPMGQS 262
           + PN GY SG PSA+KN WGSQTP               + PW   G G   ASAP GQS
Sbjct: 282 NAPNAGYVSGAPSAIKNNWGSQTP-----TGYGASGYGTTAPWGAPGGGAAAASAPRGQS 336

Query: 261 P 259
           P
Sbjct: 337 P 337


>OMD98969.1 hypothetical protein BSK60_33690, partial [Paenibacillus odorifer]
          Length = 94

 Score = 52.0 bits (123), Expect = 8e-06
 Identities = 30/100 (30%), Positives = 36/100 (36%), Gaps = 13/100 (13%)
 Frame = -3

Query: 511 WLWC----WRIRKCQCRLWRTCWSIWEPKWPKYWLCERPTQCLEKHMGKSNSWLRNC--- 353
           W WC    W  R C CR W  CW            C R + C  +   +   W R+C   
Sbjct: 9   WCWCHCRRWCRRWCHCRRWCRCWC----------RCRRGSWCWRRCHCRRWRW-RHCRRR 57

Query: 352 -----WLWCKCRLWG*CSLEC-ARQWWWCFCTYGSISEWC 251
                W WC CR W  C   C  R+W  C+        WC
Sbjct: 58  RRCWRWCWCHCRRWCWCHCRCWCRRWCHCW-------RWC 90


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