BLASTX nr result
ID: Panax25_contig00002603
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00002603
(1075 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAU19414.1 hypothetical protein TSUD_76580, partial [Trifolium s... 106 1e-21
CDP12051.1 unnamed protein product [Coffea canephora] 103 1e-20
XP_019169888.1 PREDICTED: DNA repair helicase XPB1-like [Ipomoea... 100 2e-19
XP_002273444.1 PREDICTED: DNA repair helicase XPB1 [Vitis vinifera] 100 3e-19
XP_018633737.1 PREDICTED: DNA repair helicase XPB1-like [Nicotia... 99 4e-19
XP_019267166.1 PREDICTED: DNA repair helicase XPB1 [Nicotiana at... 99 7e-19
XP_019151628.1 PREDICTED: DNA repair helicase XPB1 isoform X3 [I... 98 1e-18
XP_019151627.1 PREDICTED: DNA repair helicase XPB1 isoform X2 [I... 98 1e-18
XP_019151624.1 PREDICTED: DNA repair helicase XPB1 isoform X1 [I... 98 1e-18
XP_016485251.1 PREDICTED: DNA repair helicase XPB1-like, partial... 94 2e-18
KZN04729.1 hypothetical protein DCAR_005566 [Daucus carota subsp... 97 2e-18
XP_017235722.1 PREDICTED: DNA repair helicase XPB1 [Daucus carot... 97 2e-18
KZV36286.1 hypothetical protein F511_14304 [Dorcoceras hygrometr... 97 2e-18
XP_011080928.1 PREDICTED: DNA repair helicase XPB1-like [Sesamum... 97 2e-18
CBI34367.3 unnamed protein product, partial [Vitis vinifera] 97 3e-18
XP_016498300.1 PREDICTED: DNA repair helicase XPB1-like [Nicotia... 97 3e-18
XP_016476264.1 PREDICTED: DNA repair helicase XPB1 [Nicotiana ta... 97 3e-18
XP_009790427.1 PREDICTED: DNA repair helicase XPB1 [Nicotiana sy... 97 3e-18
XP_006343950.1 PREDICTED: DNA repair helicase XPB1 [Solanum tube... 96 4e-18
XP_004245582.1 PREDICTED: DNA repair helicase XPB1 [Solanum lyco... 96 4e-18
>GAU19414.1 hypothetical protein TSUD_76580, partial [Trifolium subterraneum]
Length = 735
Score = 106 bits (265), Expect = 1e-21
Identities = 60/97 (61%), Positives = 64/97 (65%)
Frame = -2
Query: 999 VLNFLY*DDFGGRKYFYY*GMQGSDGFTISKSLGEIEGRHXXXXXXXXXXXXXXXXXAHS 820
VL L DD R G +G DGFT+SK+LGEIEG H AH+
Sbjct: 168 VLKTLLRDDGISRARITSEGARG-DGFTVSKALGEIEGTHDELLNEAEVAAAAEEKEAHA 226
Query: 819 FEIDPAQVNPDLDMELKPQAQPRPYQEKSLSKMFGNG 709
FEIDPAQVNPDLDMELKPQAQPRPYQEKSLSKMFGNG
Sbjct: 227 FEIDPAQVNPDLDMELKPQAQPRPYQEKSLSKMFGNG 263
>CDP12051.1 unnamed protein product [Coffea canephora]
Length = 753
Score = 103 bits (258), Expect = 1e-20
Identities = 62/124 (50%), Positives = 66/124 (53%), Gaps = 27/124 (21%)
Frame = -2
Query: 999 VLNFLY*DDFGGRKYFYY*GMQGSDGFTISKSLGEIEGRHXXXXXXXXXXXXXXXXXAHS 820
VL L D+ GR G+ GSDGFT+SKS+GEIEGRH HS
Sbjct: 159 VLKRLLKDEVIGRARISTEGLHGSDGFTVSKSMGEIEGRHDELLNEAELAAAAEEKETHS 218
Query: 819 FEIDPAQV---------------------------NPDLDMELKPQAQPRPYQEKSLSKM 721
FEIDPAQV NPDLDMELKPQAQPRPYQEKSLSKM
Sbjct: 219 FEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKM 278
Query: 720 FGNG 709
FGNG
Sbjct: 279 FGNG 282
>XP_019169888.1 PREDICTED: DNA repair helicase XPB1-like [Ipomoea nil]
Length = 765
Score = 100 bits (249), Expect = 2e-19
Identities = 60/124 (48%), Positives = 64/124 (51%), Gaps = 27/124 (21%)
Frame = -2
Query: 999 VLNFLY*DDFGGRKYFYY*GMQGSDGFTISKSLGEIEGRHXXXXXXXXXXXXXXXXXAHS 820
VL L D+ GR G+ GSDGFT+SKS GEIEGRH HS
Sbjct: 174 VLKTLLRDEVIGRSRLMSAGVHGSDGFTVSKSAGEIEGRHDELLNEAELAAAAEEKETHS 233
Query: 819 FEIDPAQV---------------------------NPDLDMELKPQAQPRPYQEKSLSKM 721
FEIDP+QV NPDLDMELKP AQPRPYQEKSLSKM
Sbjct: 234 FEIDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPHAQPRPYQEKSLSKM 293
Query: 720 FGNG 709
FGNG
Sbjct: 294 FGNG 297
>XP_002273444.1 PREDICTED: DNA repair helicase XPB1 [Vitis vinifera]
Length = 771
Score = 99.8 bits (247), Expect = 3e-19
Identities = 59/124 (47%), Positives = 65/124 (52%), Gaps = 27/124 (21%)
Frame = -2
Query: 999 VLNFLY*DDFGGRKYFYY*GMQGSDGFTISKSLGEIEGRHXXXXXXXXXXXXXXXXXAHS 820
VL L D+ R + G G+DGFTISK++GEIEGRH HS
Sbjct: 175 VLKTLLRDEVISRSRISHEGSTGNDGFTISKTVGEIEGRHDELINEAELAAAAEEKETHS 234
Query: 819 FEIDPAQV---------------------------NPDLDMELKPQAQPRPYQEKSLSKM 721
FE+DPAQV NPDLDMELKPQAQPRPYQEKSLSKM
Sbjct: 235 FEVDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKM 294
Query: 720 FGNG 709
FGNG
Sbjct: 295 FGNG 298
>XP_018633737.1 PREDICTED: DNA repair helicase XPB1-like [Nicotiana
tomentosiformis]
Length = 762
Score = 99.4 bits (246), Expect = 4e-19
Identities = 54/98 (55%), Positives = 57/98 (58%), Gaps = 20/98 (20%)
Frame = -2
Query: 942 GMQGSDGFTISKSLGEIEGRHXXXXXXXXXXXXXXXXXAHSFEIDPAQV----------- 796
GM G DGFT+SKS+ EIEGRH H+FEIDPAQV
Sbjct: 195 GMHGRDGFTVSKSVNEIEGRHDELINEADLAAAAEEKETHAFEIDPAQVITNALRQGVIL 254
Query: 795 ---------NPDLDMELKPQAQPRPYQEKSLSKMFGNG 709
NPDLDMELKPQAQPRPYQEKSLSKMFGNG
Sbjct: 255 LNTYLTLQVNPDLDMELKPQAQPRPYQEKSLSKMFGNG 292
>XP_019267166.1 PREDICTED: DNA repair helicase XPB1 [Nicotiana attenuata]
OIT34566.1 dna repair helicase xpb1 [Nicotiana
attenuata]
Length = 769
Score = 98.6 bits (244), Expect = 7e-19
Identities = 55/105 (52%), Positives = 58/105 (55%), Gaps = 27/105 (25%)
Frame = -2
Query: 942 GMQGSDGFTISKSLGEIEGRHXXXXXXXXXXXXXXXXXAHSFEIDPAQV----------- 796
GMQG DGFT+SKS+ EIEGRH H+FEIDPAQV
Sbjct: 195 GMQGRDGFTVSKSVNEIEGRHDELINEADLAAAAEEKETHAFEIDPAQVENVKQRCLPNA 254
Query: 795 ----------------NPDLDMELKPQAQPRPYQEKSLSKMFGNG 709
NPDLDMELKPQAQPRPYQEKSLSKMFGNG
Sbjct: 255 LNYPMMEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNG 299
>XP_019151628.1 PREDICTED: DNA repair helicase XPB1 isoform X3 [Ipomoea nil]
Length = 720
Score = 98.2 bits (243), Expect = 1e-18
Identities = 59/124 (47%), Positives = 64/124 (51%), Gaps = 27/124 (21%)
Frame = -2
Query: 999 VLNFLY*DDFGGRKYFYY*GMQGSDGFTISKSLGEIEGRHXXXXXXXXXXXXXXXXXAHS 820
VL L D+ GR G+ G+DGFT+SKS GEIEGRH HS
Sbjct: 170 VLKKLLEDEVIGRARISSEGVHGNDGFTVSKSAGEIEGRHDELLNEAELAAAAEEKETHS 229
Query: 819 FEIDPAQV---------------------------NPDLDMELKPQAQPRPYQEKSLSKM 721
FEIDP+QV NPDLDMELKP AQPRPYQEKSLSKM
Sbjct: 230 FEIDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPHAQPRPYQEKSLSKM 289
Query: 720 FGNG 709
FGNG
Sbjct: 290 FGNG 293
>XP_019151627.1 PREDICTED: DNA repair helicase XPB1 isoform X2 [Ipomoea nil]
Length = 764
Score = 98.2 bits (243), Expect = 1e-18
Identities = 59/124 (47%), Positives = 64/124 (51%), Gaps = 27/124 (21%)
Frame = -2
Query: 999 VLNFLY*DDFGGRKYFYY*GMQGSDGFTISKSLGEIEGRHXXXXXXXXXXXXXXXXXAHS 820
VL L D+ GR G+ G+DGFT+SKS GEIEGRH HS
Sbjct: 169 VLKKLLEDEVIGRARISSEGVHGNDGFTVSKSAGEIEGRHDELLNEAELAAAAEEKETHS 228
Query: 819 FEIDPAQV---------------------------NPDLDMELKPQAQPRPYQEKSLSKM 721
FEIDP+QV NPDLDMELKP AQPRPYQEKSLSKM
Sbjct: 229 FEIDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPHAQPRPYQEKSLSKM 288
Query: 720 FGNG 709
FGNG
Sbjct: 289 FGNG 292
>XP_019151624.1 PREDICTED: DNA repair helicase XPB1 isoform X1 [Ipomoea nil]
XP_019151625.1 PREDICTED: DNA repair helicase XPB1
isoform X1 [Ipomoea nil]
Length = 765
Score = 98.2 bits (243), Expect = 1e-18
Identities = 59/124 (47%), Positives = 64/124 (51%), Gaps = 27/124 (21%)
Frame = -2
Query: 999 VLNFLY*DDFGGRKYFYY*GMQGSDGFTISKSLGEIEGRHXXXXXXXXXXXXXXXXXAHS 820
VL L D+ GR G+ G+DGFT+SKS GEIEGRH HS
Sbjct: 170 VLKKLLEDEVIGRARISSEGVHGNDGFTVSKSAGEIEGRHDELLNEAELAAAAEEKETHS 229
Query: 819 FEIDPAQV---------------------------NPDLDMELKPQAQPRPYQEKSLSKM 721
FEIDP+QV NPDLDMELKP AQPRPYQEKSLSKM
Sbjct: 230 FEIDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPHAQPRPYQEKSLSKM 289
Query: 720 FGNG 709
FGNG
Sbjct: 290 FGNG 293
>XP_016485251.1 PREDICTED: DNA repair helicase XPB1-like, partial [Nicotiana
tabacum]
Length = 280
Score = 94.4 bits (233), Expect = 2e-18
Identities = 53/104 (50%), Positives = 56/104 (53%), Gaps = 27/104 (25%)
Frame = -2
Query: 942 GMQGSDGFTISKSLGEIEGRHXXXXXXXXXXXXXXXXXAHSFEIDPAQV----------- 796
GM G DGFT+SKS+ EIEGRH H+FEIDPAQV
Sbjct: 177 GMHGRDGFTVSKSVNEIEGRHDELINEADLAAAAEEKETHAFEIDPAQVENVKQRCLPNA 236
Query: 795 ----------------NPDLDMELKPQAQPRPYQEKSLSKMFGN 712
NPDLDMELKPQAQPRPYQEKSLSKMFGN
Sbjct: 237 LNYPMMEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGN 280
>KZN04729.1 hypothetical protein DCAR_005566 [Daucus carota subsp. sativus]
Length = 714
Score = 97.4 bits (241), Expect = 2e-18
Identities = 55/103 (53%), Positives = 59/103 (57%), Gaps = 27/103 (26%)
Frame = -2
Query: 936 QGSDGFTISKSLGEIEGRHXXXXXXXXXXXXXXXXXAHSFEIDPAQV------------- 796
+G+DGFTISKSLGEIEGRH AH+FE+DPAQV
Sbjct: 167 EGNDGFTISKSLGEIEGRHEELLNEAQLAAAAEEKEAHAFEVDPAQVENVKQRCLPNALN 226
Query: 795 --------------NPDLDMELKPQAQPRPYQEKSLSKMFGNG 709
NPDLDMELKPQAQPRPYQEKSLSKMFGNG
Sbjct: 227 YPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNG 269
>XP_017235722.1 PREDICTED: DNA repair helicase XPB1 [Daucus carota subsp. sativus]
Length = 756
Score = 97.4 bits (241), Expect = 2e-18
Identities = 55/103 (53%), Positives = 59/103 (57%), Gaps = 27/103 (26%)
Frame = -2
Query: 936 QGSDGFTISKSLGEIEGRHXXXXXXXXXXXXXXXXXAHSFEIDPAQV------------- 796
+G+DGFTISKSLGEIEGRH AH+FE+DPAQV
Sbjct: 185 EGNDGFTISKSLGEIEGRHEELLNEAQLAAAAEEKEAHAFEVDPAQVENVKQRCLPNALN 244
Query: 795 --------------NPDLDMELKPQAQPRPYQEKSLSKMFGNG 709
NPDLDMELKPQAQPRPYQEKSLSKMFGNG
Sbjct: 245 YPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNG 287
>KZV36286.1 hypothetical protein F511_14304 [Dorcoceras hygrometricum]
Length = 793
Score = 97.4 bits (241), Expect = 2e-18
Identities = 58/124 (46%), Positives = 64/124 (51%), Gaps = 27/124 (21%)
Frame = -2
Query: 999 VLNFLY*DDFGGRKYFYY*GMQGSDGFTISKSLGEIEGRHXXXXXXXXXXXXXXXXXAHS 820
VL L D+ GR + G+QGSDGFT+ KS GEI+G H HS
Sbjct: 190 VLKKLLMDEVIGRARISFEGVQGSDGFTVGKSTGEIDGGHNELLNEVELAAAAEEKETHS 249
Query: 819 FEIDPAQV---------------------------NPDLDMELKPQAQPRPYQEKSLSKM 721
FEIDPAQV NPDLD+ELKP AQPRPYQEKSLSKM
Sbjct: 250 FEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDVELKPHAQPRPYQEKSLSKM 309
Query: 720 FGNG 709
FGNG
Sbjct: 310 FGNG 313
>XP_011080928.1 PREDICTED: DNA repair helicase XPB1-like [Sesamum indicum]
Length = 766
Score = 97.1 bits (240), Expect = 2e-18
Identities = 58/124 (46%), Positives = 63/124 (50%), Gaps = 27/124 (21%)
Frame = -2
Query: 999 VLNFLY*DDFGGRKYFYY*GMQGSDGFTISKSLGEIEGRHXXXXXXXXXXXXXXXXXAHS 820
VL L D+ GR + G+ G+DGFTI KS GEIEG H HS
Sbjct: 172 VLKTLLKDEVIGRARIFSEGIHGNDGFTIGKSAGEIEGAHDELLNEAELAAVAEEKETHS 231
Query: 819 FEIDPAQV---------------------------NPDLDMELKPQAQPRPYQEKSLSKM 721
FEIDP+QV NPDLDMELKP AQPRPYQEKSLSKM
Sbjct: 232 FEIDPSQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPHAQPRPYQEKSLSKM 291
Query: 720 FGNG 709
FGNG
Sbjct: 292 FGNG 295
>CBI34367.3 unnamed protein product, partial [Vitis vinifera]
Length = 850
Score = 97.1 bits (240), Expect = 3e-18
Identities = 54/105 (51%), Positives = 58/105 (55%), Gaps = 27/105 (25%)
Frame = -2
Query: 942 GMQGSDGFTISKSLGEIEGRHXXXXXXXXXXXXXXXXXAHSFEIDPAQV----------- 796
G G+DGFTISK++GEIEGRH HSFE+DPAQV
Sbjct: 273 GSTGNDGFTISKTVGEIEGRHDELINEAELAAAAEEKETHSFEVDPAQVENVKQRCLPNA 332
Query: 795 ----------------NPDLDMELKPQAQPRPYQEKSLSKMFGNG 709
NPDLDMELKPQAQPRPYQEKSLSKMFGNG
Sbjct: 333 LNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNG 377
>XP_016498300.1 PREDICTED: DNA repair helicase XPB1-like [Nicotiana tabacum]
Length = 769
Score = 96.7 bits (239), Expect = 3e-18
Identities = 54/105 (51%), Positives = 57/105 (54%), Gaps = 27/105 (25%)
Frame = -2
Query: 942 GMQGSDGFTISKSLGEIEGRHXXXXXXXXXXXXXXXXXAHSFEIDPAQV----------- 796
GM G DGFT+SKS+ EIEGRH H+FEIDPAQV
Sbjct: 195 GMHGRDGFTVSKSVNEIEGRHDELINEADLAAAAEEKETHAFEIDPAQVENVKQRCLPNA 254
Query: 795 ----------------NPDLDMELKPQAQPRPYQEKSLSKMFGNG 709
NPDLDMELKPQAQPRPYQEKSLSKMFGNG
Sbjct: 255 LNYPMMEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNG 299
>XP_016476264.1 PREDICTED: DNA repair helicase XPB1 [Nicotiana tabacum]
Length = 769
Score = 96.7 bits (239), Expect = 3e-18
Identities = 54/105 (51%), Positives = 57/105 (54%), Gaps = 27/105 (25%)
Frame = -2
Query: 942 GMQGSDGFTISKSLGEIEGRHXXXXXXXXXXXXXXXXXAHSFEIDPAQV----------- 796
GM G DGFT+SKS+ EIEGRH H+FEIDPAQV
Sbjct: 195 GMHGRDGFTVSKSVNEIEGRHDELINEADLAAAAEEKETHAFEIDPAQVENVKQRCLPNA 254
Query: 795 ----------------NPDLDMELKPQAQPRPYQEKSLSKMFGNG 709
NPDLDMELKPQAQPRPYQEKSLSKMFGNG
Sbjct: 255 LNYPMMEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNG 299
>XP_009790427.1 PREDICTED: DNA repair helicase XPB1 [Nicotiana sylvestris]
XP_009790428.1 PREDICTED: DNA repair helicase XPB1
[Nicotiana sylvestris]
Length = 769
Score = 96.7 bits (239), Expect = 3e-18
Identities = 54/105 (51%), Positives = 57/105 (54%), Gaps = 27/105 (25%)
Frame = -2
Query: 942 GMQGSDGFTISKSLGEIEGRHXXXXXXXXXXXXXXXXXAHSFEIDPAQV----------- 796
GM G DGFT+SKS+ EIEGRH H+FEIDPAQV
Sbjct: 195 GMHGRDGFTVSKSVNEIEGRHDELINEADLAAAAEEKETHAFEIDPAQVENVKQRCLPNA 254
Query: 795 ----------------NPDLDMELKPQAQPRPYQEKSLSKMFGNG 709
NPDLDMELKPQAQPRPYQEKSLSKMFGNG
Sbjct: 255 LNYPMMEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNG 299
>XP_006343950.1 PREDICTED: DNA repair helicase XPB1 [Solanum tuberosum]
Length = 768
Score = 96.3 bits (238), Expect = 4e-18
Identities = 59/124 (47%), Positives = 62/124 (50%), Gaps = 27/124 (21%)
Frame = -2
Query: 999 VLNFLY*DDFGGRKYFYY*GMQGSDGFTISKSLGEIEGRHXXXXXXXXXXXXXXXXXAHS 820
VL L DD G+ GM G DGFT+SK + EIEG H HS
Sbjct: 177 VLKRLLADDAIGKARISSEGMHGKDGFTVSKPVNEIEGGHDELINEVDVAAAAEEKETHS 236
Query: 819 FEIDPAQV---------------------------NPDLDMELKPQAQPRPYQEKSLSKM 721
FEIDPAQV NPDLDMELKPQAQPRPYQEKSLSKM
Sbjct: 237 FEIDPAQVENVKQRCLPNALNYPMMEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKM 296
Query: 720 FGNG 709
FGNG
Sbjct: 297 FGNG 300
>XP_004245582.1 PREDICTED: DNA repair helicase XPB1 [Solanum lycopersicum]
Length = 768
Score = 96.3 bits (238), Expect = 4e-18
Identities = 59/124 (47%), Positives = 62/124 (50%), Gaps = 27/124 (21%)
Frame = -2
Query: 999 VLNFLY*DDFGGRKYFYY*GMQGSDGFTISKSLGEIEGRHXXXXXXXXXXXXXXXXXAHS 820
VL L DD G+ GM G DGFT+SK + EIEG H HS
Sbjct: 177 VLKRLLADDAIGKARISSEGMHGKDGFTVSKPVNEIEGGHDELINEVDVAAAAEEKETHS 236
Query: 819 FEIDPAQV---------------------------NPDLDMELKPQAQPRPYQEKSLSKM 721
FEIDPAQV NPDLDMELKPQAQPRPYQEKSLSKM
Sbjct: 237 FEIDPAQVENVKQRCLPNALNYPMMEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKM 296
Query: 720 FGNG 709
FGNG
Sbjct: 297 FGNG 300