BLASTX nr result

ID: Panax25_contig00002594 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00002594
         (396 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_003601110.1 30S ribosomal protein S13 [Medicago truncatula] A...   115   5e-30
XP_015571459.1 PREDICTED: 30S ribosomal protein S13, chloroplast...   115   5e-30
XP_012078159.1 PREDICTED: 30S ribosomal protein S13, chloroplast...   114   7e-30
XP_013662406.1 PREDICTED: 30S ribosomal protein S13, chloroplast...   112   1e-29
AFK44070.1 unknown [Lotus japonicus]                                  113   3e-29
XP_011001411.1 PREDICTED: 30S ribosomal protein S13, chloroplast...   113   3e-29
XP_002306609.2 hypothetical protein POPTR_0005s16160g [Populus t...   113   3e-29
XP_013612722.1 PREDICTED: 30S ribosomal protein S13, chloroplast...   112   4e-29
XP_013667649.1 PREDICTED: 30S ribosomal protein S13, chloroplast...   112   4e-29
OMO56194.1 Ribosomal protein S13 [Corchorus olitorius]                112   4e-29
XP_018446555.1 PREDICTED: 30S ribosomal protein S13, chloroplast...   112   4e-29
XP_018473709.1 PREDICTED: 30S ribosomal protein S13, chloroplast...   112   4e-29
XP_009121676.1 PREDICTED: 30S ribosomal protein S13, chloroplast...   112   4e-29
XP_013629852.1 PREDICTED: 30S ribosomal protein S13, chloroplast...   112   4e-29
XP_009131397.1 PREDICTED: 30S ribosomal protein S13, chloroplast...   112   4e-29
CDY57901.1 BnaC09g54460D [Brassica napus]                             112   4e-29
CDX91071.1 BnaC02g05260D [Brassica napus]                             112   5e-29
XP_013675037.1 PREDICTED: 30S ribosomal protein S13, chloroplast...   112   5e-29
XP_013675036.1 PREDICTED: 30S ribosomal protein S13, chloroplast...   112   5e-29
XP_006399942.1 hypothetical protein EUTSA_v10014848mg [Eutrema s...   112   6e-29

>XP_003601110.1 30S ribosomal protein S13 [Medicago truncatula] AES71361.1 30S
           ribosomal protein S13 [Medicago truncatula] AFK46233.1
           unknown [Medicago truncatula]
          Length = 166

 Score =  115 bits (287), Expect = 5e-30
 Identities = 54/80 (67%), Positives = 66/80 (82%)
 Frame = +1

Query: 1   RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
           RARQIL+++++ NK+TK+L  EE+I+LRDEVNKYMIEGDLRR    +I+RLK IQCYRG 
Sbjct: 74  RARQILTDISMENKVTKELSEEELISLRDEVNKYMIEGDLRRFNALNIKRLKEIQCYRGI 133

Query: 181 RHTDGLSCRGQRTKTNCWTM 240
           RH  GL CRGQRTK NC T+
Sbjct: 134 RHIQGLPCRGQRTKNNCRTL 153


>XP_015571459.1 PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Ricinus
           communis]
          Length = 168

 Score =  115 bits (287), Expect = 5e-30
 Identities = 56/80 (70%), Positives = 64/80 (80%)
 Frame = +1

Query: 1   RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
           RARQILS+L++ NKITK+L  EE+I LRDEV+KYMIEGDLRR    +I RLK IQCYRG 
Sbjct: 74  RARQILSDLSMENKITKELSEEELITLRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGV 133

Query: 181 RHTDGLSCRGQRTKTNCWTM 240
           RH  GL CRGQRTK NC T+
Sbjct: 134 RHIQGLPCRGQRTKNNCRTL 153


>XP_012078159.1 PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Jatropha
           curcas] KDP32750.1 hypothetical protein JCGZ_12042
           [Jatropha curcas]
          Length = 168

 Score =  114 bits (286), Expect = 7e-30
 Identities = 56/80 (70%), Positives = 63/80 (78%)
 Frame = +1

Query: 1   RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
           RARQIL++L+  NKITKDL  EE+I LRDEV+KYMIEGDLRR    +I RLK IQCYRG 
Sbjct: 74  RARQILADLSFENKITKDLSEEELITLRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGI 133

Query: 181 RHTDGLSCRGQRTKTNCWTM 240
           RH  GL CRGQRTK NC T+
Sbjct: 134 RHIQGLPCRGQRTKNNCRTL 153


>XP_013662406.1 PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Brassica
           napus]
          Length = 132

 Score =  112 bits (281), Expect = 1e-29
 Identities = 55/80 (68%), Positives = 62/80 (77%)
 Frame = +1

Query: 1   RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
           RARQIL +L + NKITKD+  EE+I LRDEV+KYMIEGDLRR     I+RLK IQCYRG 
Sbjct: 38  RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 97

Query: 181 RHTDGLSCRGQRTKTNCWTM 240
           RH  GL CRGQRTK NC T+
Sbjct: 98  RHIQGLPCRGQRTKNNCRTL 117


>AFK44070.1 unknown [Lotus japonicus]
          Length = 164

 Score =  113 bits (282), Expect = 3e-29
 Identities = 55/80 (68%), Positives = 64/80 (80%)
 Frame = +1

Query: 1   RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
           RAR+IL +LN+ NKITK+L  EE+I LRDEV+KYMIEGDLRR    +I+RLK IQCYRG 
Sbjct: 72  RARKILCDLNMDNKITKELSEEELITLRDEVSKYMIEGDLRRFNATNIKRLKDIQCYRGI 131

Query: 181 RHTDGLSCRGQRTKTNCWTM 240
           RH  GL CRGQRTK NC T+
Sbjct: 132 RHIQGLPCRGQRTKNNCRTL 151


>XP_011001411.1 PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Populus
           euphratica]
          Length = 168

 Score =  113 bits (282), Expect = 3e-29
 Identities = 55/79 (69%), Positives = 62/79 (78%)
 Frame = +1

Query: 4   ARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGAR 183
           ARQILS+L + NKITKDL  +E+I LRDEV+KYMIEGDLRR    +I RLK IQCYRG R
Sbjct: 75  ARQILSDLTMENKITKDLSEDELITLRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGVR 134

Query: 184 HTDGLSCRGQRTKTNCWTM 240
           H  GL CRGQRTK NC T+
Sbjct: 135 HIQGLPCRGQRTKNNCRTL 153


>XP_002306609.2 hypothetical protein POPTR_0005s16160g [Populus trichocarpa]
           EEE93605.2 hypothetical protein POPTR_0005s16160g
           [Populus trichocarpa]
          Length = 168

 Score =  113 bits (282), Expect = 3e-29
 Identities = 55/79 (69%), Positives = 62/79 (78%)
 Frame = +1

Query: 4   ARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGAR 183
           ARQILS+L + NKITKDL  +E+I LRDEV+KYMIEGDLRR    +I RLK IQCYRG R
Sbjct: 75  ARQILSDLTMENKITKDLSEDELITLRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGVR 134

Query: 184 HTDGLSCRGQRTKTNCWTM 240
           H  GL CRGQRTK NC T+
Sbjct: 135 HIQGLPCRGQRTKNNCRTL 153


>XP_013612722.1 PREDICTED: 30S ribosomal protein S13, chloroplastic [Brassica
           oleracea var. oleracea]
          Length = 166

 Score =  112 bits (281), Expect = 4e-29
 Identities = 55/80 (68%), Positives = 62/80 (77%)
 Frame = +1

Query: 1   RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
           RARQIL +L + NKITKD+  EE+I LRDEV+KYMIEGDLRR     I+RLK IQCYRG 
Sbjct: 72  RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 131

Query: 181 RHTDGLSCRGQRTKTNCWTM 240
           RH  GL CRGQRTK NC T+
Sbjct: 132 RHIQGLPCRGQRTKNNCRTL 151


>XP_013667649.1 PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Brassica
           napus] XP_013714602.1 PREDICTED: 30S ribosomal protein
           S13, chloroplastic-like [Brassica napus]
          Length = 167

 Score =  112 bits (281), Expect = 4e-29
 Identities = 55/80 (68%), Positives = 62/80 (77%)
 Frame = +1

Query: 1   RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
           RARQIL +L + NKITKD+  EE+I LRDEV+KYMIEGDLRR     I+RLK IQCYRG 
Sbjct: 73  RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 132

Query: 181 RHTDGLSCRGQRTKTNCWTM 240
           RH  GL CRGQRTK NC T+
Sbjct: 133 RHIQGLPCRGQRTKNNCRTL 152


>OMO56194.1 Ribosomal protein S13 [Corchorus olitorius]
          Length = 168

 Score =  112 bits (281), Expect = 4e-29
 Identities = 55/80 (68%), Positives = 62/80 (77%)
 Frame = +1

Query: 1   RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
           RARQIL +L + NKITKDL  EE+I +RDEV+KYMIEGDLRR    +I RLK IQCYRG 
Sbjct: 74  RARQILCDLKMDNKITKDLSEEELITIRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGI 133

Query: 181 RHTDGLSCRGQRTKTNCWTM 240
           RH  GL CRGQRTK NC T+
Sbjct: 134 RHIQGLPCRGQRTKNNCRTL 153


>XP_018446555.1 PREDICTED: 30S ribosomal protein S13, chloroplastic [Raphanus
           sativus]
          Length = 169

 Score =  112 bits (281), Expect = 4e-29
 Identities = 55/80 (68%), Positives = 62/80 (77%)
 Frame = +1

Query: 1   RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
           RARQIL +L + NKITKD+  EE+I LRDEV+KYMIEGDLRR     I+RLK IQCYRG 
Sbjct: 75  RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 134

Query: 181 RHTDGLSCRGQRTKTNCWTM 240
           RH  GL CRGQRTK NC T+
Sbjct: 135 RHIQGLPCRGQRTKNNCRTL 154


>XP_018473709.1 PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Raphanus
           sativus]
          Length = 169

 Score =  112 bits (281), Expect = 4e-29
 Identities = 55/80 (68%), Positives = 62/80 (77%)
 Frame = +1

Query: 1   RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
           RARQIL +L + NKITKD+  EE+I LRDEV+KYMIEGDLRR     I+RLK IQCYRG 
Sbjct: 75  RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 134

Query: 181 RHTDGLSCRGQRTKTNCWTM 240
           RH  GL CRGQRTK NC T+
Sbjct: 135 RHIQGLPCRGQRTKNNCRTL 154


>XP_009121676.1 PREDICTED: 30S ribosomal protein S13, chloroplastic [Brassica rapa]
           CDX69590.1 BnaA10g19390D [Brassica napus]
          Length = 169

 Score =  112 bits (281), Expect = 4e-29
 Identities = 55/80 (68%), Positives = 62/80 (77%)
 Frame = +1

Query: 1   RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
           RARQIL +L + NKITKD+  EE+I LRDEV+KYMIEGDLRR     I+RLK IQCYRG 
Sbjct: 75  RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 134

Query: 181 RHTDGLSCRGQRTKTNCWTM 240
           RH  GL CRGQRTK NC T+
Sbjct: 135 RHIQGLPCRGQRTKNNCRTL 154


>XP_013629852.1 PREDICTED: 30S ribosomal protein S13, chloroplastic [Brassica
           oleracea var. oleracea] XP_013714552.1 PREDICTED: 30S
           ribosomal protein S13, chloroplastic [Brassica napus]
           CDX70555.1 BnaC03g06390D [Brassica napus]
          Length = 169

 Score =  112 bits (281), Expect = 4e-29
 Identities = 55/80 (68%), Positives = 62/80 (77%)
 Frame = +1

Query: 1   RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
           RARQIL +L + NKITKD+  EE+I LRDEV+KYMIEGDLRR     I+RLK IQCYRG 
Sbjct: 75  RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 134

Query: 181 RHTDGLSCRGQRTKTNCWTM 240
           RH  GL CRGQRTK NC T+
Sbjct: 135 RHIQGLPCRGQRTKNNCRTL 154


>XP_009131397.1 PREDICTED: 30S ribosomal protein S13, chloroplastic [Brassica rapa]
           XP_013727081.1 PREDICTED: 30S ribosomal protein S13,
           chloroplastic-like [Brassica napus] XP_013727788.1
           PREDICTED: 30S ribosomal protein S13, chloroplastic-like
           [Brassica napus] XP_013676674.1 PREDICTED: 30S ribosomal
           protein S13, chloroplastic-like [Brassica napus]
           XP_013676679.1 PREDICTED: 30S ribosomal protein S13,
           chloroplastic-like [Brassica napus] CDX78570.1
           BnaA03g04820D [Brassica napus]
          Length = 169

 Score =  112 bits (281), Expect = 4e-29
 Identities = 55/80 (68%), Positives = 62/80 (77%)
 Frame = +1

Query: 1   RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
           RARQIL +L + NKITKD+  EE+I LRDEV+KYMIEGDLRR     I+RLK IQCYRG 
Sbjct: 75  RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 134

Query: 181 RHTDGLSCRGQRTKTNCWTM 240
           RH  GL CRGQRTK NC T+
Sbjct: 135 RHIQGLPCRGQRTKNNCRTL 154


>CDY57901.1 BnaC09g54460D [Brassica napus]
          Length = 169

 Score =  112 bits (281), Expect = 4e-29
 Identities = 55/80 (68%), Positives = 62/80 (77%)
 Frame = +1

Query: 1   RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
           RARQIL +L + NKITKD+  EE+I LRDEV+KYMIEGDLRR     I+RLK IQCYRG 
Sbjct: 75  RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 134

Query: 181 RHTDGLSCRGQRTKTNCWTM 240
           RH  GL CRGQRTK NC T+
Sbjct: 135 RHIQGLPCRGQRTKNNCRTL 154


>CDX91071.1 BnaC02g05260D [Brassica napus]
          Length = 161

 Score =  112 bits (280), Expect = 5e-29
 Identities = 54/80 (67%), Positives = 62/80 (77%)
 Frame = +1

Query: 1   RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
           RARQIL +L + NKITKD+  EE+I LRDEV+KYMIEGDLRR     ++RLK IQCYRG 
Sbjct: 67  RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAVKRLKEIQCYRGV 126

Query: 181 RHTDGLSCRGQRTKTNCWTM 240
           RH  GL CRGQRTK NC T+
Sbjct: 127 RHIQGLPCRGQRTKNNCRTL 146


>XP_013675037.1 PREDICTED: 30S ribosomal protein S13, chloroplastic-like isoform X2
           [Brassica napus] XP_013726131.1 PREDICTED: 30S ribosomal
           protein S13, chloroplastic-like isoform X2 [Brassica
           napus]
          Length = 162

 Score =  112 bits (280), Expect = 5e-29
 Identities = 54/80 (67%), Positives = 62/80 (77%)
 Frame = +1

Query: 1   RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
           RARQIL +L + NKITKD+  EE+I LRDEV+KYMIEGDLRR     ++RLK IQCYRG 
Sbjct: 68  RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAVKRLKEIQCYRGV 127

Query: 181 RHTDGLSCRGQRTKTNCWTM 240
           RH  GL CRGQRTK NC T+
Sbjct: 128 RHIQGLPCRGQRTKNNCRTL 147


>XP_013675036.1 PREDICTED: 30S ribosomal protein S13, chloroplastic-like isoform X1
           [Brassica napus] XP_013726130.1 PREDICTED: 30S ribosomal
           protein S13, chloroplastic-like isoform X1 [Brassica
           napus]
          Length = 163

 Score =  112 bits (280), Expect = 5e-29
 Identities = 54/80 (67%), Positives = 62/80 (77%)
 Frame = +1

Query: 1   RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
           RARQIL +L + NKITKD+  EE+I LRDEV+KYMIEGDLRR     ++RLK IQCYRG 
Sbjct: 69  RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAVKRLKEIQCYRGV 128

Query: 181 RHTDGLSCRGQRTKTNCWTM 240
           RH  GL CRGQRTK NC T+
Sbjct: 129 RHIQGLPCRGQRTKNNCRTL 148


>XP_006399942.1 hypothetical protein EUTSA_v10014848mg [Eutrema salsugineum]
           ESQ41395.1 hypothetical protein EUTSA_v10014848mg
           [Eutrema salsugineum]
          Length = 168

 Score =  112 bits (280), Expect = 6e-29
 Identities = 55/80 (68%), Positives = 62/80 (77%)
 Frame = +1

Query: 1   RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
           RARQIL +L + NKITKD+  EE+I LRDEV+KYMIEGDLRR     I+RLK IQCYRG 
Sbjct: 74  RARQILVDLQMENKITKDMAEEELIILRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 133

Query: 181 RHTDGLSCRGQRTKTNCWTM 240
           RH  GL CRGQRTK NC T+
Sbjct: 134 RHIQGLPCRGQRTKNNCRTL 153


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