BLASTX nr result
ID: Panax25_contig00002594
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00002594
(396 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_003601110.1 30S ribosomal protein S13 [Medicago truncatula] A... 115 5e-30
XP_015571459.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 115 5e-30
XP_012078159.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 114 7e-30
XP_013662406.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 112 1e-29
AFK44070.1 unknown [Lotus japonicus] 113 3e-29
XP_011001411.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 113 3e-29
XP_002306609.2 hypothetical protein POPTR_0005s16160g [Populus t... 113 3e-29
XP_013612722.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 112 4e-29
XP_013667649.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 112 4e-29
OMO56194.1 Ribosomal protein S13 [Corchorus olitorius] 112 4e-29
XP_018446555.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 112 4e-29
XP_018473709.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 112 4e-29
XP_009121676.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 112 4e-29
XP_013629852.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 112 4e-29
XP_009131397.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 112 4e-29
CDY57901.1 BnaC09g54460D [Brassica napus] 112 4e-29
CDX91071.1 BnaC02g05260D [Brassica napus] 112 5e-29
XP_013675037.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 112 5e-29
XP_013675036.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 112 5e-29
XP_006399942.1 hypothetical protein EUTSA_v10014848mg [Eutrema s... 112 6e-29
>XP_003601110.1 30S ribosomal protein S13 [Medicago truncatula] AES71361.1 30S
ribosomal protein S13 [Medicago truncatula] AFK46233.1
unknown [Medicago truncatula]
Length = 166
Score = 115 bits (287), Expect = 5e-30
Identities = 54/80 (67%), Positives = 66/80 (82%)
Frame = +1
Query: 1 RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
RARQIL+++++ NK+TK+L EE+I+LRDEVNKYMIEGDLRR +I+RLK IQCYRG
Sbjct: 74 RARQILTDISMENKVTKELSEEELISLRDEVNKYMIEGDLRRFNALNIKRLKEIQCYRGI 133
Query: 181 RHTDGLSCRGQRTKTNCWTM 240
RH GL CRGQRTK NC T+
Sbjct: 134 RHIQGLPCRGQRTKNNCRTL 153
>XP_015571459.1 PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Ricinus
communis]
Length = 168
Score = 115 bits (287), Expect = 5e-30
Identities = 56/80 (70%), Positives = 64/80 (80%)
Frame = +1
Query: 1 RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
RARQILS+L++ NKITK+L EE+I LRDEV+KYMIEGDLRR +I RLK IQCYRG
Sbjct: 74 RARQILSDLSMENKITKELSEEELITLRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGV 133
Query: 181 RHTDGLSCRGQRTKTNCWTM 240
RH GL CRGQRTK NC T+
Sbjct: 134 RHIQGLPCRGQRTKNNCRTL 153
>XP_012078159.1 PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Jatropha
curcas] KDP32750.1 hypothetical protein JCGZ_12042
[Jatropha curcas]
Length = 168
Score = 114 bits (286), Expect = 7e-30
Identities = 56/80 (70%), Positives = 63/80 (78%)
Frame = +1
Query: 1 RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
RARQIL++L+ NKITKDL EE+I LRDEV+KYMIEGDLRR +I RLK IQCYRG
Sbjct: 74 RARQILADLSFENKITKDLSEEELITLRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGI 133
Query: 181 RHTDGLSCRGQRTKTNCWTM 240
RH GL CRGQRTK NC T+
Sbjct: 134 RHIQGLPCRGQRTKNNCRTL 153
>XP_013662406.1 PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Brassica
napus]
Length = 132
Score = 112 bits (281), Expect = 1e-29
Identities = 55/80 (68%), Positives = 62/80 (77%)
Frame = +1
Query: 1 RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
RARQIL +L + NKITKD+ EE+I LRDEV+KYMIEGDLRR I+RLK IQCYRG
Sbjct: 38 RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 97
Query: 181 RHTDGLSCRGQRTKTNCWTM 240
RH GL CRGQRTK NC T+
Sbjct: 98 RHIQGLPCRGQRTKNNCRTL 117
>AFK44070.1 unknown [Lotus japonicus]
Length = 164
Score = 113 bits (282), Expect = 3e-29
Identities = 55/80 (68%), Positives = 64/80 (80%)
Frame = +1
Query: 1 RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
RAR+IL +LN+ NKITK+L EE+I LRDEV+KYMIEGDLRR +I+RLK IQCYRG
Sbjct: 72 RARKILCDLNMDNKITKELSEEELITLRDEVSKYMIEGDLRRFNATNIKRLKDIQCYRGI 131
Query: 181 RHTDGLSCRGQRTKTNCWTM 240
RH GL CRGQRTK NC T+
Sbjct: 132 RHIQGLPCRGQRTKNNCRTL 151
>XP_011001411.1 PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Populus
euphratica]
Length = 168
Score = 113 bits (282), Expect = 3e-29
Identities = 55/79 (69%), Positives = 62/79 (78%)
Frame = +1
Query: 4 ARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGAR 183
ARQILS+L + NKITKDL +E+I LRDEV+KYMIEGDLRR +I RLK IQCYRG R
Sbjct: 75 ARQILSDLTMENKITKDLSEDELITLRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGVR 134
Query: 184 HTDGLSCRGQRTKTNCWTM 240
H GL CRGQRTK NC T+
Sbjct: 135 HIQGLPCRGQRTKNNCRTL 153
>XP_002306609.2 hypothetical protein POPTR_0005s16160g [Populus trichocarpa]
EEE93605.2 hypothetical protein POPTR_0005s16160g
[Populus trichocarpa]
Length = 168
Score = 113 bits (282), Expect = 3e-29
Identities = 55/79 (69%), Positives = 62/79 (78%)
Frame = +1
Query: 4 ARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGAR 183
ARQILS+L + NKITKDL +E+I LRDEV+KYMIEGDLRR +I RLK IQCYRG R
Sbjct: 75 ARQILSDLTMENKITKDLSEDELITLRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGVR 134
Query: 184 HTDGLSCRGQRTKTNCWTM 240
H GL CRGQRTK NC T+
Sbjct: 135 HIQGLPCRGQRTKNNCRTL 153
>XP_013612722.1 PREDICTED: 30S ribosomal protein S13, chloroplastic [Brassica
oleracea var. oleracea]
Length = 166
Score = 112 bits (281), Expect = 4e-29
Identities = 55/80 (68%), Positives = 62/80 (77%)
Frame = +1
Query: 1 RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
RARQIL +L + NKITKD+ EE+I LRDEV+KYMIEGDLRR I+RLK IQCYRG
Sbjct: 72 RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 131
Query: 181 RHTDGLSCRGQRTKTNCWTM 240
RH GL CRGQRTK NC T+
Sbjct: 132 RHIQGLPCRGQRTKNNCRTL 151
>XP_013667649.1 PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Brassica
napus] XP_013714602.1 PREDICTED: 30S ribosomal protein
S13, chloroplastic-like [Brassica napus]
Length = 167
Score = 112 bits (281), Expect = 4e-29
Identities = 55/80 (68%), Positives = 62/80 (77%)
Frame = +1
Query: 1 RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
RARQIL +L + NKITKD+ EE+I LRDEV+KYMIEGDLRR I+RLK IQCYRG
Sbjct: 73 RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 132
Query: 181 RHTDGLSCRGQRTKTNCWTM 240
RH GL CRGQRTK NC T+
Sbjct: 133 RHIQGLPCRGQRTKNNCRTL 152
>OMO56194.1 Ribosomal protein S13 [Corchorus olitorius]
Length = 168
Score = 112 bits (281), Expect = 4e-29
Identities = 55/80 (68%), Positives = 62/80 (77%)
Frame = +1
Query: 1 RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
RARQIL +L + NKITKDL EE+I +RDEV+KYMIEGDLRR +I RLK IQCYRG
Sbjct: 74 RARQILCDLKMDNKITKDLSEEELITIRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGI 133
Query: 181 RHTDGLSCRGQRTKTNCWTM 240
RH GL CRGQRTK NC T+
Sbjct: 134 RHIQGLPCRGQRTKNNCRTL 153
>XP_018446555.1 PREDICTED: 30S ribosomal protein S13, chloroplastic [Raphanus
sativus]
Length = 169
Score = 112 bits (281), Expect = 4e-29
Identities = 55/80 (68%), Positives = 62/80 (77%)
Frame = +1
Query: 1 RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
RARQIL +L + NKITKD+ EE+I LRDEV+KYMIEGDLRR I+RLK IQCYRG
Sbjct: 75 RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 134
Query: 181 RHTDGLSCRGQRTKTNCWTM 240
RH GL CRGQRTK NC T+
Sbjct: 135 RHIQGLPCRGQRTKNNCRTL 154
>XP_018473709.1 PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Raphanus
sativus]
Length = 169
Score = 112 bits (281), Expect = 4e-29
Identities = 55/80 (68%), Positives = 62/80 (77%)
Frame = +1
Query: 1 RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
RARQIL +L + NKITKD+ EE+I LRDEV+KYMIEGDLRR I+RLK IQCYRG
Sbjct: 75 RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 134
Query: 181 RHTDGLSCRGQRTKTNCWTM 240
RH GL CRGQRTK NC T+
Sbjct: 135 RHIQGLPCRGQRTKNNCRTL 154
>XP_009121676.1 PREDICTED: 30S ribosomal protein S13, chloroplastic [Brassica rapa]
CDX69590.1 BnaA10g19390D [Brassica napus]
Length = 169
Score = 112 bits (281), Expect = 4e-29
Identities = 55/80 (68%), Positives = 62/80 (77%)
Frame = +1
Query: 1 RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
RARQIL +L + NKITKD+ EE+I LRDEV+KYMIEGDLRR I+RLK IQCYRG
Sbjct: 75 RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 134
Query: 181 RHTDGLSCRGQRTKTNCWTM 240
RH GL CRGQRTK NC T+
Sbjct: 135 RHIQGLPCRGQRTKNNCRTL 154
>XP_013629852.1 PREDICTED: 30S ribosomal protein S13, chloroplastic [Brassica
oleracea var. oleracea] XP_013714552.1 PREDICTED: 30S
ribosomal protein S13, chloroplastic [Brassica napus]
CDX70555.1 BnaC03g06390D [Brassica napus]
Length = 169
Score = 112 bits (281), Expect = 4e-29
Identities = 55/80 (68%), Positives = 62/80 (77%)
Frame = +1
Query: 1 RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
RARQIL +L + NKITKD+ EE+I LRDEV+KYMIEGDLRR I+RLK IQCYRG
Sbjct: 75 RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 134
Query: 181 RHTDGLSCRGQRTKTNCWTM 240
RH GL CRGQRTK NC T+
Sbjct: 135 RHIQGLPCRGQRTKNNCRTL 154
>XP_009131397.1 PREDICTED: 30S ribosomal protein S13, chloroplastic [Brassica rapa]
XP_013727081.1 PREDICTED: 30S ribosomal protein S13,
chloroplastic-like [Brassica napus] XP_013727788.1
PREDICTED: 30S ribosomal protein S13, chloroplastic-like
[Brassica napus] XP_013676674.1 PREDICTED: 30S ribosomal
protein S13, chloroplastic-like [Brassica napus]
XP_013676679.1 PREDICTED: 30S ribosomal protein S13,
chloroplastic-like [Brassica napus] CDX78570.1
BnaA03g04820D [Brassica napus]
Length = 169
Score = 112 bits (281), Expect = 4e-29
Identities = 55/80 (68%), Positives = 62/80 (77%)
Frame = +1
Query: 1 RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
RARQIL +L + NKITKD+ EE+I LRDEV+KYMIEGDLRR I+RLK IQCYRG
Sbjct: 75 RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 134
Query: 181 RHTDGLSCRGQRTKTNCWTM 240
RH GL CRGQRTK NC T+
Sbjct: 135 RHIQGLPCRGQRTKNNCRTL 154
>CDY57901.1 BnaC09g54460D [Brassica napus]
Length = 169
Score = 112 bits (281), Expect = 4e-29
Identities = 55/80 (68%), Positives = 62/80 (77%)
Frame = +1
Query: 1 RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
RARQIL +L + NKITKD+ EE+I LRDEV+KYMIEGDLRR I+RLK IQCYRG
Sbjct: 75 RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 134
Query: 181 RHTDGLSCRGQRTKTNCWTM 240
RH GL CRGQRTK NC T+
Sbjct: 135 RHIQGLPCRGQRTKNNCRTL 154
>CDX91071.1 BnaC02g05260D [Brassica napus]
Length = 161
Score = 112 bits (280), Expect = 5e-29
Identities = 54/80 (67%), Positives = 62/80 (77%)
Frame = +1
Query: 1 RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
RARQIL +L + NKITKD+ EE+I LRDEV+KYMIEGDLRR ++RLK IQCYRG
Sbjct: 67 RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAVKRLKEIQCYRGV 126
Query: 181 RHTDGLSCRGQRTKTNCWTM 240
RH GL CRGQRTK NC T+
Sbjct: 127 RHIQGLPCRGQRTKNNCRTL 146
>XP_013675037.1 PREDICTED: 30S ribosomal protein S13, chloroplastic-like isoform X2
[Brassica napus] XP_013726131.1 PREDICTED: 30S ribosomal
protein S13, chloroplastic-like isoform X2 [Brassica
napus]
Length = 162
Score = 112 bits (280), Expect = 5e-29
Identities = 54/80 (67%), Positives = 62/80 (77%)
Frame = +1
Query: 1 RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
RARQIL +L + NKITKD+ EE+I LRDEV+KYMIEGDLRR ++RLK IQCYRG
Sbjct: 68 RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAVKRLKEIQCYRGV 127
Query: 181 RHTDGLSCRGQRTKTNCWTM 240
RH GL CRGQRTK NC T+
Sbjct: 128 RHIQGLPCRGQRTKNNCRTL 147
>XP_013675036.1 PREDICTED: 30S ribosomal protein S13, chloroplastic-like isoform X1
[Brassica napus] XP_013726130.1 PREDICTED: 30S ribosomal
protein S13, chloroplastic-like isoform X1 [Brassica
napus]
Length = 163
Score = 112 bits (280), Expect = 5e-29
Identities = 54/80 (67%), Positives = 62/80 (77%)
Frame = +1
Query: 1 RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
RARQIL +L + NKITKD+ EE+I LRDEV+KYMIEGDLRR ++RLK IQCYRG
Sbjct: 69 RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAVKRLKEIQCYRGV 128
Query: 181 RHTDGLSCRGQRTKTNCWTM 240
RH GL CRGQRTK NC T+
Sbjct: 129 RHIQGLPCRGQRTKNNCRTL 148
>XP_006399942.1 hypothetical protein EUTSA_v10014848mg [Eutrema salsugineum]
ESQ41395.1 hypothetical protein EUTSA_v10014848mg
[Eutrema salsugineum]
Length = 168
Score = 112 bits (280), Expect = 6e-29
Identities = 55/80 (68%), Positives = 62/80 (77%)
Frame = +1
Query: 1 RARQILSNLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGA 180
RARQIL +L + NKITKD+ EE+I LRDEV+KYMIEGDLRR I+RLK IQCYRG
Sbjct: 74 RARQILVDLQMENKITKDMAEEELIILRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 133
Query: 181 RHTDGLSCRGQRTKTNCWTM 240
RH GL CRGQRTK NC T+
Sbjct: 134 RHIQGLPCRGQRTKNNCRTL 153