BLASTX nr result

ID: Panax25_contig00001580 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00001580
         (402 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017258830.1 PREDICTED: 40S ribosomal protein S12-like [Daucus...   143   2e-41
XP_009626787.1 PREDICTED: 40S ribosomal protein S12-like [Nicoti...   142   4e-41
XP_016487007.1 PREDICTED: 40S ribosomal protein S12-like [Nicoti...   142   4e-41
XP_019239915.1 PREDICTED: 40S ribosomal protein S12-like [Nicoti...   141   8e-41
XP_019168612.1 PREDICTED: 40S ribosomal protein S12-like [Ipomoe...   140   2e-40
XP_009763379.1 PREDICTED: 40S ribosomal protein S12-like [Nicoti...   139   7e-40
XP_019176050.1 PREDICTED: 40S ribosomal protein S12-like [Ipomoe...   137   4e-39
KZM91756.1 hypothetical protein DCAR_020879 [Daucus carota subsp...   137   5e-39
XP_010655009.1 PREDICTED: 40S ribosomal protein S12 [Vitis vinif...   136   8e-39
XP_016551972.1 PREDICTED: 40S ribosomal protein S12-like [Capsic...   136   1e-38
XP_011087707.1 PREDICTED: 40S ribosomal protein S12-like [Sesamu...   136   1e-38
XP_017249862.1 PREDICTED: 40S ribosomal protein S12-like [Daucus...   135   2e-38
XP_015070800.1 PREDICTED: 40S ribosomal protein S12-like [Solanu...   135   2e-38
XP_006350544.1 PREDICTED: 40S ribosomal protein S12-like isoform...   135   2e-38
XP_009768402.1 PREDICTED: 40S ribosomal protein S12-like isoform...   134   6e-38
XP_004252305.1 PREDICTED: 40S ribosomal protein S12 [Solanum lyc...   134   6e-38
XP_004234964.1 PREDICTED: 40S ribosomal protein S12 [Solanum lyc...   134   6e-38
KVH90319.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 [Cynara cardu...   134   7e-38
CBI38929.3 unnamed protein product, partial [Vitis vinifera]          136   1e-37
XP_002302129.1 40S ribosomal protein S12-1 [Populus trichocarpa]...   134   1e-37

>XP_017258830.1 PREDICTED: 40S ribosomal protein S12-like [Daucus carota subsp.
           sativus]
          Length = 143

 Score =  143 bits (360), Expect = 2e-41
 Identities = 72/82 (87%), Positives = 75/82 (91%), Gaps = 2/82 (2%)
 Frame = -3

Query: 298 MSGEDAVVTETPVPA--PALGERMDTMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHAAQ 125
           MSGEDAVV +TP PA  PALGE MD MTALQLVL+KSLAHGGL+RGLHEGAKVIEKHAAQ
Sbjct: 1   MSGEDAVVVDTPAPAAAPALGEPMDIMTALQLVLKKSLAHGGLARGLHEGAKVIEKHAAQ 60

Query: 124 LCVVAEDCNQPDYVKLVKTLCA 59
           LCVVAEDCNQPDYVKLVK LCA
Sbjct: 61  LCVVAEDCNQPDYVKLVKALCA 82


>XP_009626787.1 PREDICTED: 40S ribosomal protein S12-like [Nicotiana
           tomentosiformis] XP_019235061.1 PREDICTED: 40S ribosomal
           protein S12-like [Nicotiana attenuata]
          Length = 141

 Score =  142 bits (358), Expect = 4e-41
 Identities = 69/80 (86%), Positives = 74/80 (92%)
 Frame = -3

Query: 298 MSGEDAVVTETPVPAPALGERMDTMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHAAQLC 119
           MSGE+AVV ETP PAPALGE MD MTALQLVLRKS AHGGL++GLHEGAKVIEKHAAQLC
Sbjct: 1   MSGEEAVVAETPAPAPALGEPMDIMTALQLVLRKSRAHGGLAKGLHEGAKVIEKHAAQLC 60

Query: 118 VVAEDCNQPDYVKLVKTLCA 59
           V+AEDC+QPDYVKLVK LCA
Sbjct: 61  VLAEDCDQPDYVKLVKALCA 80


>XP_016487007.1 PREDICTED: 40S ribosomal protein S12-like [Nicotiana tabacum]
          Length = 143

 Score =  142 bits (358), Expect = 4e-41
 Identities = 69/80 (86%), Positives = 74/80 (92%)
 Frame = -3

Query: 298 MSGEDAVVTETPVPAPALGERMDTMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHAAQLC 119
           MSGE+AVV ETP PAPALGE MD MTALQLVLRKS AHGGL++GLHEGAKVIEKHAAQLC
Sbjct: 1   MSGEEAVVAETPAPAPALGEPMDIMTALQLVLRKSRAHGGLAKGLHEGAKVIEKHAAQLC 60

Query: 118 VVAEDCNQPDYVKLVKTLCA 59
           V+AEDC+QPDYVKLVK LCA
Sbjct: 61  VLAEDCDQPDYVKLVKALCA 80


>XP_019239915.1 PREDICTED: 40S ribosomal protein S12-like [Nicotiana attenuata]
           OIT20646.1 40s ribosomal protein s12 [Nicotiana
           attenuata]
          Length = 141

 Score =  141 bits (356), Expect = 8e-41
 Identities = 68/80 (85%), Positives = 74/80 (92%)
 Frame = -3

Query: 298 MSGEDAVVTETPVPAPALGERMDTMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHAAQLC 119
           MSGE+AVV ETP PAPALGE MD MTALQ+VLRKS AHGGL++GLHEGAKVIEKHAAQLC
Sbjct: 1   MSGEEAVVAETPAPAPALGEPMDIMTALQIVLRKSRAHGGLAKGLHEGAKVIEKHAAQLC 60

Query: 118 VVAEDCNQPDYVKLVKTLCA 59
           V+AEDC+QPDYVKLVK LCA
Sbjct: 61  VLAEDCDQPDYVKLVKALCA 80


>XP_019168612.1 PREDICTED: 40S ribosomal protein S12-like [Ipomoea nil]
          Length = 141

 Score =  140 bits (354), Expect = 2e-40
 Identities = 68/79 (86%), Positives = 72/79 (91%)
 Frame = -3

Query: 298 MSGEDAVVTETPVPAPALGERMDTMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHAAQLC 119
           MSGE+ V  E P PAPALGE MDTMTALQLVLRKSLAHGGL+RGLHEGAKVIEKHAAQLC
Sbjct: 1   MSGEENVAAEAPAPAPALGEPMDTMTALQLVLRKSLAHGGLTRGLHEGAKVIEKHAAQLC 60

Query: 118 VVAEDCNQPDYVKLVKTLC 62
           V+AEDC+QPDYVKLVK LC
Sbjct: 61  VLAEDCDQPDYVKLVKALC 79


>XP_009763379.1 PREDICTED: 40S ribosomal protein S12-like [Nicotiana sylvestris]
           XP_016449683.1 PREDICTED: 40S ribosomal protein S12-like
           [Nicotiana tabacum]
          Length = 141

 Score =  139 bits (350), Expect = 7e-40
 Identities = 68/80 (85%), Positives = 73/80 (91%)
 Frame = -3

Query: 298 MSGEDAVVTETPVPAPALGERMDTMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHAAQLC 119
           MSGE+AVV ETP PA ALGE MD MTALQLVLRKS AHGGL++GLHEGAKVIEKHAAQLC
Sbjct: 1   MSGEEAVVAETPAPAAALGEPMDIMTALQLVLRKSRAHGGLAKGLHEGAKVIEKHAAQLC 60

Query: 118 VVAEDCNQPDYVKLVKTLCA 59
           V+AEDC+QPDYVKLVK LCA
Sbjct: 61  VLAEDCDQPDYVKLVKALCA 80


>XP_019176050.1 PREDICTED: 40S ribosomal protein S12-like [Ipomoea nil]
           XP_019176051.1 PREDICTED: 40S ribosomal protein S12-like
           [Ipomoea nil]
          Length = 141

 Score =  137 bits (345), Expect = 4e-39
 Identities = 67/80 (83%), Positives = 71/80 (88%)
 Frame = -3

Query: 298 MSGEDAVVTETPVPAPALGERMDTMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHAAQLC 119
           MSGED VV ETP PAPALGE MD MTALQLVL+KS AHGGL+RGLHE AKVIEKH AQLC
Sbjct: 1   MSGEDVVVAETPAPAPALGEPMDLMTALQLVLKKSRAHGGLARGLHECAKVIEKHGAQLC 60

Query: 118 VVAEDCNQPDYVKLVKTLCA 59
           V+AEDC+QPDYVKLVK LCA
Sbjct: 61  VLAEDCDQPDYVKLVKALCA 80


>KZM91756.1 hypothetical protein DCAR_020879 [Daucus carota subsp. sativus]
          Length = 148

 Score =  137 bits (345), Expect = 5e-39
 Identities = 69/79 (87%), Positives = 72/79 (91%), Gaps = 2/79 (2%)
 Frame = -3

Query: 289 EDAVVTETPVPA--PALGERMDTMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHAAQLCV 116
           EDAVV +TP PA  PALGE MD MTALQLVL+KSLAHGGL+RGLHEGAKVIEKHAAQLCV
Sbjct: 9   EDAVVVDTPAPAAAPALGEPMDIMTALQLVLKKSLAHGGLARGLHEGAKVIEKHAAQLCV 68

Query: 115 VAEDCNQPDYVKLVKTLCA 59
           VAEDCNQPDYVKLVK LCA
Sbjct: 69  VAEDCNQPDYVKLVKALCA 87


>XP_010655009.1 PREDICTED: 40S ribosomal protein S12 [Vitis vinifera]
          Length = 142

 Score =  136 bits (343), Expect = 8e-39
 Identities = 69/81 (85%), Positives = 72/81 (88%), Gaps = 1/81 (1%)
 Frame = -3

Query: 298 MSGEDAVVT-ETPVPAPALGERMDTMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHAAQL 122
           MSGE+ VV  ET  PAPALGE MD MTALQLVLRKSLAHGGL+RGLHEGAKVIEKHAA L
Sbjct: 1   MSGEEVVVAVETSAPAPALGEPMDLMTALQLVLRKSLAHGGLARGLHEGAKVIEKHAAHL 60

Query: 121 CVVAEDCNQPDYVKLVKTLCA 59
           CV+AEDCNQPDYVKLVK LCA
Sbjct: 61  CVLAEDCNQPDYVKLVKALCA 81


>XP_016551972.1 PREDICTED: 40S ribosomal protein S12-like [Capsicum annuum]
          Length = 141

 Score =  136 bits (342), Expect = 1e-38
 Identities = 66/80 (82%), Positives = 71/80 (88%)
 Frame = -3

Query: 298 MSGEDAVVTETPVPAPALGERMDTMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHAAQLC 119
           MS E+ V  ETP PAPALGE MD MTALQLVLRKS AHGGL++GLHEGAKVIEKHAAQLC
Sbjct: 1   MSDEEPVAAETPAPAPALGEPMDIMTALQLVLRKSWAHGGLAKGLHEGAKVIEKHAAQLC 60

Query: 118 VVAEDCNQPDYVKLVKTLCA 59
           V+AEDC+QPDYVKLVK LCA
Sbjct: 61  VLAEDCDQPDYVKLVKALCA 80


>XP_011087707.1 PREDICTED: 40S ribosomal protein S12-like [Sesamum indicum]
           XP_011087708.1 PREDICTED: 40S ribosomal protein S12-like
           [Sesamum indicum]
          Length = 141

 Score =  136 bits (342), Expect = 1e-38
 Identities = 67/80 (83%), Positives = 70/80 (87%)
 Frame = -3

Query: 298 MSGEDAVVTETPVPAPALGERMDTMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHAAQLC 119
           MSGEDA V E P PAPALGE MD MTALQLVLRKS AHGGL+RGLHE AKVIEKHAAQLC
Sbjct: 1   MSGEDAAVAEAPAPAPALGEPMDIMTALQLVLRKSRAHGGLARGLHEAAKVIEKHAAQLC 60

Query: 118 VVAEDCNQPDYVKLVKTLCA 59
           V+AEDC+Q DYVKLVK LCA
Sbjct: 61  VLAEDCDQADYVKLVKALCA 80


>XP_017249862.1 PREDICTED: 40S ribosomal protein S12-like [Daucus carota subsp.
           sativus] XP_017249863.1 PREDICTED: 40S ribosomal protein
           S12-like [Daucus carota subsp. sativus] KZM96138.1
           hypothetical protein DCAR_019380 [Daucus carota subsp.
           sativus]
          Length = 142

 Score =  135 bits (341), Expect = 2e-38
 Identities = 70/82 (85%), Positives = 74/82 (90%), Gaps = 2/82 (2%)
 Frame = -3

Query: 298 MSGEDAVVTETPVPA--PALGERMDTMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHAAQ 125
           MSGEDA+V ETP PA  PALGE MD MTALQLVL+KSLAH GL+RGLHEGAKVIEKHAAQ
Sbjct: 1   MSGEDAIV-ETPAPAAAPALGEPMDIMTALQLVLKKSLAHSGLARGLHEGAKVIEKHAAQ 59

Query: 124 LCVVAEDCNQPDYVKLVKTLCA 59
           LCV+AEDCNQPDYVKLVK LCA
Sbjct: 60  LCVLAEDCNQPDYVKLVKALCA 81


>XP_015070800.1 PREDICTED: 40S ribosomal protein S12-like [Solanum pennellii]
          Length = 141

 Score =  135 bits (340), Expect = 2e-38
 Identities = 67/80 (83%), Positives = 69/80 (86%)
 Frame = -3

Query: 298 MSGEDAVVTETPVPAPALGERMDTMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHAAQLC 119
           MSGED  V     PAPALGE MD MTALQLVLRKS AHGGLSRGLHEGAKVIEKHAAQLC
Sbjct: 1   MSGEDVAVAVAEAPAPALGEPMDIMTALQLVLRKSKAHGGLSRGLHEGAKVIEKHAAQLC 60

Query: 118 VVAEDCNQPDYVKLVKTLCA 59
           V+AEDC+QPDYVKLVK LCA
Sbjct: 61  VLAEDCDQPDYVKLVKALCA 80


>XP_006350544.1 PREDICTED: 40S ribosomal protein S12-like isoform X1 [Solanum
           tuberosum]
          Length = 141

 Score =  135 bits (340), Expect = 2e-38
 Identities = 67/80 (83%), Positives = 69/80 (86%)
 Frame = -3

Query: 298 MSGEDAVVTETPVPAPALGERMDTMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHAAQLC 119
           MSGED  V     PAPALGE MD MTALQLVLRKS AHGGLSRGLHEGAKVIEKHAAQLC
Sbjct: 1   MSGEDVAVAVAEAPAPALGEPMDIMTALQLVLRKSRAHGGLSRGLHEGAKVIEKHAAQLC 60

Query: 118 VVAEDCNQPDYVKLVKTLCA 59
           V+AEDC+QPDYVKLVK LCA
Sbjct: 61  VLAEDCDQPDYVKLVKALCA 80


>XP_009768402.1 PREDICTED: 40S ribosomal protein S12-like isoform X1 [Nicotiana
           sylvestris] XP_009768403.1 PREDICTED: 40S ribosomal
           protein S12-like isoform X1 [Nicotiana sylvestris]
           XP_016504405.1 PREDICTED: 40S ribosomal protein S12-like
           isoform X1 [Nicotiana tabacum] XP_016504406.1 PREDICTED:
           40S ribosomal protein S12-like isoform X2 [Nicotiana
           tabacum]
          Length = 141

 Score =  134 bits (337), Expect = 6e-38
 Identities = 66/80 (82%), Positives = 69/80 (86%)
 Frame = -3

Query: 298 MSGEDAVVTETPVPAPALGERMDTMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHAAQLC 119
           MSGED  V     PAPALGE MD MTALQLVLRKS AHGGL+RGLHEGAKVIEKHAAQLC
Sbjct: 1   MSGEDVAVAVAETPAPALGEPMDIMTALQLVLRKSKAHGGLARGLHEGAKVIEKHAAQLC 60

Query: 118 VVAEDCNQPDYVKLVKTLCA 59
           V+AEDC+QPDYVKLVK LCA
Sbjct: 61  VLAEDCDQPDYVKLVKALCA 80


>XP_004252305.1 PREDICTED: 40S ribosomal protein S12 [Solanum lycopersicum]
           XP_006346604.1 PREDICTED: 40S ribosomal protein S12-like
           [Solanum tuberosum] XP_015059238.1 PREDICTED: 40S
           ribosomal protein S12-like [Solanum pennellii]
          Length = 141

 Score =  134 bits (337), Expect = 6e-38
 Identities = 65/79 (82%), Positives = 70/79 (88%)
 Frame = -3

Query: 298 MSGEDAVVTETPVPAPALGERMDTMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHAAQLC 119
           MSGE+ V  ETP PAPALGE MD MTALQLVLRKS AHGGL++GLHE AKVIEKHAAQLC
Sbjct: 1   MSGEEPVAAETPAPAPALGEPMDIMTALQLVLRKSRAHGGLAKGLHEAAKVIEKHAAQLC 60

Query: 118 VVAEDCNQPDYVKLVKTLC 62
           V+AEDC+QPDYVKLVK LC
Sbjct: 61  VLAEDCDQPDYVKLVKGLC 79


>XP_004234964.1 PREDICTED: 40S ribosomal protein S12 [Solanum lycopersicum]
          Length = 141

 Score =  134 bits (337), Expect = 6e-38
 Identities = 66/80 (82%), Positives = 69/80 (86%)
 Frame = -3

Query: 298 MSGEDAVVTETPVPAPALGERMDTMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHAAQLC 119
           MSGED  V     PAP+LGE MD MTALQLVLRKS AHGGLSRGLHEGAKVIEKHAAQLC
Sbjct: 1   MSGEDVAVAVAEAPAPSLGEPMDIMTALQLVLRKSKAHGGLSRGLHEGAKVIEKHAAQLC 60

Query: 118 VVAEDCNQPDYVKLVKTLCA 59
           V+AEDC+QPDYVKLVK LCA
Sbjct: 61  VLAEDCDQPDYVKLVKALCA 80


>KVH90319.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 [Cynara cardunculus var.
           scolymus]
          Length = 142

 Score =  134 bits (337), Expect = 7e-38
 Identities = 68/81 (83%), Positives = 71/81 (87%), Gaps = 1/81 (1%)
 Frame = -3

Query: 298 MSGEDAVVT-ETPVPAPALGERMDTMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHAAQL 122
           M+GE+AVV  E P PAPALGE MD MTALQLVLRKSLAHGGL RGLHE AKVIEKHAAQL
Sbjct: 1   MAGEEAVVAVEAPAPAPALGEPMDIMTALQLVLRKSLAHGGLVRGLHEAAKVIEKHAAQL 60

Query: 121 CVVAEDCNQPDYVKLVKTLCA 59
           CV+AEDCNQPDY KLVK LCA
Sbjct: 61  CVLAEDCNQPDYQKLVKALCA 81


>CBI38929.3 unnamed protein product, partial [Vitis vinifera]
          Length = 228

 Score =  136 bits (343), Expect = 1e-37
 Identities = 69/81 (85%), Positives = 72/81 (88%), Gaps = 1/81 (1%)
 Frame = -3

Query: 298 MSGEDAVVT-ETPVPAPALGERMDTMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHAAQL 122
           MSGE+ VV  ET  PAPALGE MD MTALQLVLRKSLAHGGL+RGLHEGAKVIEKHAA L
Sbjct: 87  MSGEEVVVAVETSAPAPALGEPMDLMTALQLVLRKSLAHGGLARGLHEGAKVIEKHAAHL 146

Query: 121 CVVAEDCNQPDYVKLVKTLCA 59
           CV+AEDCNQPDYVKLVK LCA
Sbjct: 147 CVLAEDCNQPDYVKLVKALCA 167


>XP_002302129.1 40S ribosomal protein S12-1 [Populus trichocarpa] EEE81402.1 40S
           ribosomal protein S12-1 [Populus trichocarpa]
          Length = 145

 Score =  134 bits (336), Expect = 1e-37
 Identities = 68/84 (80%), Positives = 71/84 (84%), Gaps = 4/84 (4%)
 Frame = -3

Query: 298 MSGEDAVVTETPVPA----PALGERMDTMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHA 131
           MSGE+  V +T  PA    P LGE MD MTALQLVLRKSLAHGGLSRGLHEGAKVIEKHA
Sbjct: 1   MSGEEGAVAQTETPAVADVPPLGEPMDLMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHA 60

Query: 130 AQLCVVAEDCNQPDYVKLVKTLCA 59
           AQLCV+AEDCNQPDYVKLVK LCA
Sbjct: 61  AQLCVLAEDCNQPDYVKLVKALCA 84


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