BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00001495
         (976 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017235989.1 PREDICTED: protein RTF1 homolog [Daucus carota su...   180   4e-48
XP_019073959.1 PREDICTED: protein RTF1 homolog [Vitis vinifera]       155   4e-39
XP_017222797.1 PREDICTED: protein RTF1 homolog [Daucus carota su...   150   3e-37
XP_012091565.1 PREDICTED: RNA polymerase-associated protein RTF1...   146   8e-36
XP_007025691.2 PREDICTED: protein RTF1 homolog [Theobroma cacao]...   145   2e-35
EOY28313.1 PAF1 complex component isoform 1 [Theobroma cacao] EO...   145   2e-35
OAY26146.1 hypothetical protein MANES_16G024900 [Manihot esculen...   143   1e-34
OMO65136.1 Plus-3 [Corchorus olitorius]                               142   3e-34
XP_015574623.1 PREDICTED: protein RTF1 homolog [Ricinus communis...   142   4e-34
XP_017221817.1 PREDICTED: protein RTF1 homolog [Daucus carota su...   141   6e-34
XP_016726218.1 PREDICTED: LOW QUALITY PROTEIN: protein RTF1 homo...   138   6e-33
OMO76468.1 Plus-3 [Corchorus capsularis]                              138   6e-33
XP_017649555.1 PREDICTED: protein RTF1 homolog [Gossypium arboreum]   138   6e-33
XP_018809088.1 PREDICTED: protein RTF1 homolog [Juglans regia]        137   2e-32
XP_012455370.1 PREDICTED: RNA polymerase-associated protein RTF1...   134   2e-31
GAV60893.1 Plus-3 domain-containing protein, partial [Cephalotus...   134   3e-31
XP_011027887.1 PREDICTED: RNA polymerase-associated protein RTF1...   133   5e-31
XP_002305685.1 plus-3 domain-containing family protein [Populus ...   133   5e-31
XP_011047833.1 PREDICTED: RNA polymerase-associated protein RTF1...   132   7e-31
XP_011047832.1 PREDICTED: RNA polymerase-associated protein RTF1...   132   7e-31

>XP_017235989.1 PREDICTED: protein RTF1 homolog [Daucus carota subsp. sativus]
           KZN07212.1 hypothetical protein DCAR_008049 [Daucus
           carota subsp. sativus]
          Length = 654

 Score =  180 bits (457), Expect = 4e-48
 Identities = 116/230 (50%), Positives = 123/230 (53%), Gaps = 1/230 (0%)
 Frame = +1

Query: 235 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRKRS 414
           MADLEKLLLEAAGRTG                                       SRKR+
Sbjct: 1   MADLEKLLLEAAGRTGGSGRKRHSPPSPRRRRGGSYSDNGSDSREDDSDDDRGYGSRKRT 60

Query: 415 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKDEDDRRKLAQMT 594
           SSQVPLKKRL                                   LYKD+DDR+KLAQMT
Sbjct: 61  SSQVPLKKRLDPLEREEHSSQEEGNDGYGREGDSDDDSIGSD---LYKDDDDRQKLAQMT 117

Query: 595 ELEREMILSERSTKITDKKMQEKLRKQKEKMTQSRKDS-PPXXXXXXXXXXXXXXXXXXX 771
           ELEREMILSERSTKITDKKMQEKLRKQKEKM QSRKDS P                    
Sbjct: 118 ELEREMILSERSTKITDKKMQEKLRKQKEKMNQSRKDSRPHLSSRTSVRSSARSADRATA 177

Query: 772 XXXXLNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAI 921
               LNELRAKRLRQQD D HR+L + +RGGSGSRRYSPVKRRSF   A+
Sbjct: 178 KDDALNELRAKRLRQQDPDAHRRLGDSSRGGSGSRRYSPVKRRSFAPEAV 227


>XP_019073959.1 PREDICTED: protein RTF1 homolog [Vitis vinifera]
          Length = 658

 Score =  155 bits (393), Expect = 4e-39
 Identities = 97/230 (42%), Positives = 120/230 (52%), Gaps = 1/230 (0%)
 Frame = +1

Query: 235 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRKRS 414
           MADLE LLLEAAGRTG                                      +SRK S
Sbjct: 1   MADLENLLLEAAGRTGTAGRNRHSLPPSRRRREGSYSDDGSDSKDDDSDEDRGYSSRKPS 60

Query: 415 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKDEDDRRKLAQMT 594
            SQVPLKKRL                                   LYK+EDDR++LAQ+T
Sbjct: 61  GSQVPLKKRLDPTERDDDHGSPEEGDDDGSDHEGDSSDDSDVGSDLYKNEDDRQQLAQLT 120

Query: 595 ELEREMILSERSTKITDKKMQEKLR-KQKEKMTQSRKDSPPXXXXXXXXXXXXXXXXXXX 771
           ELEREMIL++R+TK TDKK+ EKLR K+ ++ TQSRK+SPP                   
Sbjct: 121 ELEREMILTDRATKKTDKKLHEKLRSKRGKEKTQSRKESPPLQLSRGVRSSARSADRAAA 180

Query: 772 XXXXLNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAI 921
               LNELRAKRL+ QD + HRKL++ +RGGS +R +SPVKRR+FTAA++
Sbjct: 181 KDDALNELRAKRLKHQDPEAHRKLRDASRGGSSNRGFSPVKRRAFTAASL 230


>XP_017222797.1 PREDICTED: protein RTF1 homolog [Daucus carota subsp. sativus]
           KZN11443.1 hypothetical protein DCAR_004099 [Daucus
           carota subsp. sativus]
          Length = 651

 Score =  150 bits (379), Expect = 3e-37
 Identities = 101/229 (44%), Positives = 116/229 (50%), Gaps = 1/229 (0%)
 Frame = +1

Query: 238 ADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRKRSS 417
           ADLEKLLLEAAGRT +                                     A RKRS+
Sbjct: 4   ADLEKLLLEAAGRTDSSGKKRQSPPLSRRRREGSYFGNGSDSREDDSDDDRRYARRKRSA 63

Query: 418 SQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKDEDDRRKLAQMTE 597
           SQVPLKKRL                                   LYKDEDD+RKLAQMTE
Sbjct: 64  SQVPLKKRLIEDARLRSREETDVGYNREGDSDDDSIGSD-----LYKDEDDKRKLAQMTE 118

Query: 598 LEREMILSERSTKITDKKMQEKLRKQKEKMTQSRKDSPP-XXXXXXXXXXXXXXXXXXXX 774
           LEREMIL+ERSTKITD+KM+EKLR QKEKM QSR+ SPP                     
Sbjct: 119 LEREMILTERSTKITDRKMKEKLRMQKEKMNQSRESSPPHVSSRTGVRSSARYAHRAAAK 178

Query: 775 XXXLNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAI 921
              LNELRAKRLR +D +   K+++    GS SRR+SPVK+R FTA A+
Sbjct: 179 GDALNELRAKRLRHKDLEAQWKVQDSTSVGSESRRFSPVKKRYFTATAV 227


>XP_012091565.1 PREDICTED: RNA polymerase-associated protein RTF1 homolog [Jatropha
           curcas] KDP20938.1 hypothetical protein JCGZ_21409
           [Jatropha curcas]
          Length = 658

 Score =  146 bits (369), Expect = 8e-36
 Identities = 96/233 (41%), Positives = 118/233 (50%), Gaps = 4/233 (1%)
 Frame = +1

Query: 235 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRKRS 414
           MADLE LLLEAAGRTG+                                     ASRK S
Sbjct: 1   MADLENLLLEAAGRTGSSGRNRNAHPPSRRRREGSYSDGGSDSRDEDSDDDRGYASRKPS 60

Query: 415 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LYKDEDDRRKLAQ 588
            SQVPLKKRL                                     LYKDEDDRRKLAQ
Sbjct: 61  GSQVPLKKRLDPAERDDDQGSQEEGGYDDGASDREGDSSDESDVGDDLYKDEDDRRKLAQ 120

Query: 589 MTELEREMILSERSTKITDKKMQEKLRKQK--EKMTQSRKDSPPXXXXXXXXXXXXXXXX 762
           M+ELEREMILSER+ K  DK + E++R ++  E+ T+SRK++PP                
Sbjct: 121 MSELEREMILSERADKKGDKNLTERIRSKRDSERATRSRKETPPLPSSRGVRTSARSADR 180

Query: 763 XXXXXXXLNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAI 921
                  LNELRAKRL+QQD + HRKL++V+RG SGSR  SPV+R+ FT+A++
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGTSGSRGVSPVRRKRFTSASL 233


>XP_007025691.2 PREDICTED: protein RTF1 homolog [Theobroma cacao] XP_007025692.2
           PREDICTED: protein RTF1 homolog [Theobroma cacao]
          Length = 660

 Score =  145 bits (366), Expect = 2e-35
 Identities = 96/233 (41%), Positives = 116/233 (49%), Gaps = 4/233 (1%)
 Frame = +1

Query: 235 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRKRS 414
           MADLE LLLEAAGRTG                                      ASRK S
Sbjct: 1   MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60

Query: 415 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LYKDEDDRRKLAQ 588
            SQVPLKKRL                                     LYK+EDDRRKLAQ
Sbjct: 61  GSQVPLKKRLDPAERDDDQGSQEEGDYDDGVSVHEGDSSDESDVGDDLYKNEDDRRKLAQ 120

Query: 589 MTELEREMILSERSTKITDKKMQEKLRKQKE--KMTQSRKDSPPXXXXXXXXXXXXXXXX 762
           MTELERE+ILSER+ K  DKK  EK+R ++E  + ++SRK++PP                
Sbjct: 121 MTELERELILSERADKRGDKKFTEKIRSKRENDRPSRSRKETPPLPSSRGVRSSARSADR 180

Query: 763 XXXXXXXLNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAI 921
                  LNELRAKRL+QQD + HRKL++ +RG SGSR  SPVKR+ FTA+++
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGSRGLSPVKRKPFTASSL 233


>EOY28313.1 PAF1 complex component isoform 1 [Theobroma cacao] EOY28314.1 PAF1
           complex component isoform 1 [Theobroma cacao]
          Length = 660

 Score =  145 bits (366), Expect = 2e-35
 Identities = 96/233 (41%), Positives = 116/233 (49%), Gaps = 4/233 (1%)
 Frame = +1

Query: 235 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRKRS 414
           MADLE LLLEAAGRTG                                      ASRK S
Sbjct: 1   MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60

Query: 415 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LYKDEDDRRKLAQ 588
            SQVPLKKRL                                     LYK+EDDRRKLAQ
Sbjct: 61  GSQVPLKKRLDPAERDDDQGSQEEGDYDDGVSVHEGDSSDESDVGDDLYKNEDDRRKLAQ 120

Query: 589 MTELEREMILSERSTKITDKKMQEKLRKQKE--KMTQSRKDSPPXXXXXXXXXXXXXXXX 762
           MTELERE+ILSER+ K  DKK  EK+R ++E  + ++SRK++PP                
Sbjct: 121 MTELERELILSERADKRGDKKFTEKIRSKRENDRPSRSRKETPPLPSSRGVRSSARSADR 180

Query: 763 XXXXXXXLNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAI 921
                  LNELRAKRL+QQD + HRKL++ +RG SGSR  SPVKR+ FTA+++
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGSRGLSPVKRKPFTASSL 233


>OAY26146.1 hypothetical protein MANES_16G024900 [Manihot esculenta] OAY26147.1
           hypothetical protein MANES_16G024900 [Manihot esculenta]
           OAY26148.1 hypothetical protein MANES_16G024900 [Manihot
           esculenta] OAY26149.1 hypothetical protein
           MANES_16G024900 [Manihot esculenta] OAY26150.1
           hypothetical protein MANES_16G024900 [Manihot esculenta]
          Length = 660

 Score =  143 bits (361), Expect = 1e-34
 Identities = 95/233 (40%), Positives = 116/233 (49%), Gaps = 4/233 (1%)
 Frame = +1

Query: 235 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRKRS 414
           MADLE LLLEAAGRTGA                                     ASRK S
Sbjct: 1   MADLENLLLEAAGRTGAAGRNRNALPSSRRRREGSYSDGGSDSRDDDSDDGRGYASRKPS 60

Query: 415 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LYKDEDDRRKLAQ 588
            SQVPLKKRL                                     LYKDEDDRRKLAQ
Sbjct: 61  GSQVPLKKRLDPTERDDDQGSQDEGDYDDGGSDREGDSSDESDVGDDLYKDEDDRRKLAQ 120

Query: 589 MTELEREMILSERSTKITDKKMQEKLRKQK--EKMTQSRKDSPPXXXXXXXXXXXXXXXX 762
           M+ELEREMILSER+ K  D+ + E++R ++  EK T+SRK++PP                
Sbjct: 121 MSELEREMILSERADKKGDRNLTERIRSKRDSEKPTRSRKETPPLPSSRGVRTSARSADR 180

Query: 763 XXXXXXXLNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAI 921
                  LNELRAKRL+QQD + HRKL++V+RG S  R  SP+KR+ FT+A++
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGTSSGRGLSPMKRKHFTSASL 233


>OMO65136.1 Plus-3 [Corchorus olitorius]
          Length = 656

 Score =  142 bits (358), Expect = 3e-34
 Identities = 94/233 (40%), Positives = 116/233 (49%), Gaps = 4/233 (1%)
 Frame = +1

Query: 235 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRKRS 414
           M DLE LLLEAAGRTG                                      ASRK S
Sbjct: 1   MQDLENLLLEAAGRTGNGGRNRHSHPPSRRRREGSYSDGGSDSRDDDSDDDQGYASRKPS 60

Query: 415 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LYKDEDDRRKLAQ 588
            SQVPLKKRL                                     LYK+EDDRR+LAQ
Sbjct: 61  GSQVPLKKRLDPAERDDDQGSQEEGDYDGGGSDRERDSSDDSDVGDDLYKNEDDRRQLAQ 120

Query: 589 MTELEREMILSERSTKITDKKMQEKLRKQKE--KMTQSRKDSPPXXXXXXXXXXXXXXXX 762
           M+ELEREMILSER+ K  DKK  EK+R +++  +  +SRK++PP                
Sbjct: 121 MSELEREMILSERADKRGDKKFTEKIRSKRDNDRPNRSRKETPPLPSSRGVRSSARSADR 180

Query: 763 XXXXXXXLNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAI 921
                  LNELRAKRL+QQD + HRKL++ +RGG+GSR  SPVKR+SFTA+++
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGGTGSRGLSPVKRKSFTASSL 233


>XP_015574623.1 PREDICTED: protein RTF1 homolog [Ricinus communis] EEF43239.1 RNA
           polymerase-associated protein RTF1, putative [Ricinus
           communis]
          Length = 660

 Score =  142 bits (357), Expect = 4e-34
 Identities = 91/233 (39%), Positives = 117/233 (50%), Gaps = 4/233 (1%)
 Frame = +1

Query: 235 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRKRS 414
           MADLE LLLEAAGRTG                                      +SRK S
Sbjct: 1   MADLENLLLEAAGRTGTSGRNRNALPPSRRRREGSYSDGGSDSRDDDSDDDRGYSSRKPS 60

Query: 415 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LYKDEDDRRKLAQ 588
            SQVPLKKRL                                     LYK+EDDRRKLAQ
Sbjct: 61  GSQVPLKKRLDPTERDDDQGSQDEGDYDDGNSDREGDSSDGSDVGEDLYKNEDDRRKLAQ 120

Query: 589 MTELEREMILSERSTKITDKKMQEKLR--KQKEKMTQSRKDSPPXXXXXXXXXXXXXXXX 762
           M+ELEREMILSER+ K  DK + E++R  ++ E+ T+SRK++PP                
Sbjct: 121 MSELEREMILSERADKKGDKNLTERIRSKRESERTTRSRKETPPLPSSRGVRTSARSADR 180

Query: 763 XXXXXXXLNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAI 921
                  LNEL+A+RL+QQD + HRKL++ +R GSGSR +SP+KR+ FT+A++
Sbjct: 181 AAAKDDALNELKARRLKQQDPEAHRKLRDASRRGSGSRGFSPIKRKRFTSASL 233


>XP_017221817.1 PREDICTED: protein RTF1 homolog [Daucus carota subsp. sativus]
           XP_017221825.1 PREDICTED: protein RTF1 homolog [Daucus
           carota subsp. sativus] KZN11441.1 hypothetical protein
           DCAR_004097 [Daucus carota subsp. sativus]
          Length = 653

 Score =  141 bits (355), Expect = 6e-34
 Identities = 100/232 (43%), Positives = 112/232 (48%), Gaps = 3/232 (1%)
 Frame = +1

Query: 235 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRKRS 414
           MADLEKLLLEAAGRTG+                                     +SR RS
Sbjct: 1   MADLEKLLLEAAGRTGSSGRKRQSPPLSRRRREGSYSDNGSDSKEDDSDDDRRYSSRNRS 60

Query: 415 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKDEDDRRKLAQMT 594
           SSQVPLKKRL                                   LYKDEDDR+KLA+MT
Sbjct: 61  SSQVPLKKRLSQLERDVGHRSREEGDVGYGREGDSDDDSIGSD--LYKDEDDRKKLAEMT 118

Query: 595 ELEREMILSERSTKITDKKMQEKLRKQKEKMTQSRKDSPP-XXXXXXXXXXXXXXXXXXX 771
           ELEREMIL+ERSTK TD+KMQEKLR QKEKM QSRK SPP                    
Sbjct: 119 ELEREMILTERSTKKTDRKMQEKLRMQKEKMNQSRKISPPHVSSRTGVRSSARYADRAAA 178

Query: 772 XXXXLNELRAKRLRQQDSDTHRKLK--EVARGGSGSRRYSPVKRRSFTAAAI 921
               LNELRAKRL+ QD +   K      + G S SRR+SPVK+R     A+
Sbjct: 179 KGDALNELRAKRLKHQDLEARWKFNRDSTSGGTSESRRFSPVKKRFVPETAV 230


>XP_016726218.1 PREDICTED: LOW QUALITY PROTEIN: protein RTF1 homolog [Gossypium
           hirsutum]
          Length = 657

 Score =  138 bits (348), Expect = 6e-33
 Identities = 91/233 (39%), Positives = 116/233 (49%), Gaps = 4/233 (1%)
 Frame = +1

Query: 235 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRKRS 414
           MADLE LLLEAAGRTG                                      ASRK S
Sbjct: 1   MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60

Query: 415 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LYKDEDDRRKLAQ 588
            SQVPLKKRL                                     LYK+E+DRR+LAQ
Sbjct: 61  GSQVPLKKRLDPAERDDDQGSQEEGDYNDAGSGRERDSSDESDVGDDLYKNEEDRRQLAQ 120

Query: 589 MTELEREMILSERSTKITDKKMQEKLRKQKE--KMTQSRKDSPPXXXXXXXXXXXXXXXX 762
           +TELEREMILSER+ K  DKK  EK+R ++E  + ++S++++PP                
Sbjct: 121 LTELEREMILSERADKRGDKKFTEKIRSKRENDRPSRSQRETPPLPSSRGVRSSARSADR 180

Query: 763 XXXXXXXLNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAI 921
                  LNELRAKRL+QQD + HRKL++ +RG SG+R  SPVKR+ FTA+++
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGNRGLSPVKRKPFTASSL 233


>OMO76468.1 Plus-3 [Corchorus capsularis]
          Length = 659

 Score =  138 bits (348), Expect = 6e-33
 Identities = 93/233 (39%), Positives = 114/233 (48%), Gaps = 4/233 (1%)
 Frame = +1

Query: 235 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRKRS 414
           M DLE LLLEAAGRTG                                      ASRK S
Sbjct: 1   MQDLENLLLEAAGRTGNGGRNRHSHPPSRRRREGSYSDGGSDSRDDDSDDDQGYASRKPS 60

Query: 415 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LYKDEDDRRKLAQ 588
            SQVPLKKRL                                     LYK+EDDRR+LAQ
Sbjct: 61  GSQVPLKKRLDPAERDDDQGSQEEGDYDGGGSDRERDSSDDSDVGDDLYKNEDDRRQLAQ 120

Query: 589 MTELEREMILSERSTKITDKKMQEKLR--KQKEKMTQSRKDSPPXXXXXXXXXXXXXXXX 762
           M+ELEREMILSER+ K  DKK  EK+R  + K++  +SRK++PP                
Sbjct: 121 MSELEREMILSERADKRGDKKFTEKIRSKRDKDRPNRSRKETPPLPSSRGVRSSARSADR 180

Query: 763 XXXXXXXLNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAI 921
                  LNELRAKRL+QQD +  RKL++ +RG +GSR  SPVKR+SFTA+++
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEARRKLRDASRGSTGSRGLSPVKRKSFTASSL 233


>XP_017649555.1 PREDICTED: protein RTF1 homolog [Gossypium arboreum]
          Length = 661

 Score =  138 bits (348), Expect = 6e-33
 Identities = 91/233 (39%), Positives = 116/233 (49%), Gaps = 4/233 (1%)
 Frame = +1

Query: 235 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRKRS 414
           MADLE LLLEAAGRTG                                      ASRK S
Sbjct: 1   MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60

Query: 415 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LYKDEDDRRKLAQ 588
            SQVPLKKRL                                     LYK+E+DRR+LAQ
Sbjct: 61  GSQVPLKKRLDPAERDDDQGSQEEGDYDDAGSGRERDSSDESDVGDDLYKNEEDRRQLAQ 120

Query: 589 MTELEREMILSERSTKITDKKMQEKLRKQKE--KMTQSRKDSPPXXXXXXXXXXXXXXXX 762
           +TELEREMILSER+ K  DKK  EK+R ++E  + ++S++++PP                
Sbjct: 121 LTELEREMILSERADKRGDKKFTEKIRSKRENDRPSRSQRETPPLPSSRGVRSSARSADR 180

Query: 763 XXXXXXXLNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAI 921
                  LNELRAKRL+QQD + HRKL++ +RG SG+R  SPVKR+ FTA+++
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGNRGLSPVKRKPFTASSL 233


>XP_018809088.1 PREDICTED: protein RTF1 homolog [Juglans regia]
          Length = 659

 Score =  137 bits (345), Expect = 2e-32
 Identities = 94/232 (40%), Positives = 115/232 (49%), Gaps = 3/232 (1%)
 Frame = +1

Query: 235 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRKRS 414
           MADLE LLLEAAGRT +                                     ASRK S
Sbjct: 1   MADLENLLLEAAGRTSSAGRNRNSRPPSRRRREGSYSDGGSDYRDDDSDDDRGYASRKPS 60

Query: 415 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-LYKDEDDRRKLAQM 591
            SQVPLKKRL                                    LYK+EDDRRKLAQM
Sbjct: 61  GSQVPLKKRLDPTERDDDLGSQEEGDDGGLSDREGDSSDESDVGDDLYKNEDDRRKLAQM 120

Query: 592 TELEREMILSERSTKITDKKMQEKLRKQKE--KMTQSRKDSPPXXXXXXXXXXXXXXXXX 765
           TELEREMILS+R++K  DK ++EK+R ++E  K TQSRK++PP                 
Sbjct: 121 TELEREMILSDRASKKIDKNLREKIRSKRESGKTTQSRKETPP-LPSSRMRLSARSADRS 179

Query: 766 XXXXXXLNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAI 921
                 LNELRAKRL+QQD + HRKL++  RG SG R +SP KR++FT  ++
Sbjct: 180 AAKDDALNELRAKRLKQQDPEAHRKLRDATRGSSGGRTFSP-KRKAFTRTSL 230


>XP_012455370.1 PREDICTED: RNA polymerase-associated protein RTF1 homolog
           [Gossypium raimondii] KJB69481.1 hypothetical protein
           B456_011G025800 [Gossypium raimondii] KJB69482.1
           hypothetical protein B456_011G025800 [Gossypium
           raimondii] KJB69483.1 hypothetical protein
           B456_011G025800 [Gossypium raimondii]
          Length = 660

 Score =  134 bits (337), Expect = 2e-31
 Identities = 91/233 (39%), Positives = 116/233 (49%), Gaps = 4/233 (1%)
 Frame = +1

Query: 235 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRKRS 414
           MADLE LLLEAAGRTG                                      ASRK S
Sbjct: 1   MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60

Query: 415 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LYKDEDDRRKLAQ 588
            SQVPLKKRL                                     LYK+E+DRR+LAQ
Sbjct: 61  GSQVPLKKRLDPAERDDDQGSQEEGDYNDAGSGRERDSSDESDVGDDLYKNEEDRRQLAQ 120

Query: 589 MTELEREMILSERSTKITDKKMQEKLRKQKE--KMTQSRKDSPPXXXXXXXXXXXXXXXX 762
           +TELEREMILSER+ K  DKK  EK+R ++E  + ++S++++PP                
Sbjct: 121 LTELEREMILSERADKRGDKKFTEKIRSKRENDRPSRSQRETPPLPSRGVRSSARSADRA 180

Query: 763 XXXXXXXLNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAI 921
                  LNELRAKRL+QQD + HRKL++ +RG SG+R  SPVKR+ FTA+++
Sbjct: 181 AAKDDA-LNELRAKRLKQQDPEAHRKLRDASRGSSGNRGLSPVKRKPFTASSL 232


>GAV60893.1 Plus-3 domain-containing protein, partial [Cephalotus follicularis]
          Length = 699

 Score =  134 bits (336), Expect = 3e-31
 Identities = 90/231 (38%), Positives = 109/231 (47%), Gaps = 4/231 (1%)
 Frame = +1

Query: 235 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRKRS 414
           MADLE LLLEAAGRT +                                      SRK S
Sbjct: 39  MADLENLLLEAAGRTNSAGRNRRSHPTSRRRRDGSDSDGGSDFRDDDSDDDRGYGSRKPS 98

Query: 415 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LYKDEDDRRKLAQ 588
            SQVPLKKRL                                     LYK+EDDR  LAQ
Sbjct: 99  GSQVPLKKRLDPTERDNDQGSQGDGDYDGGGSDHEGDSSNESDFGDDLYKNEDDRLNLAQ 158

Query: 589 MTELEREMILSERSTKITDKKMQEKLRKQK--EKMTQSRKDSPPXXXXXXXXXXXXXXXX 762
           MTEL+REMILSER+ +  DK   EKLR ++  E+  +SRK++PP                
Sbjct: 159 MTELDREMILSERADRKGDKSFTEKLRSKRDSERTNRSRKETPPLPSSRGVRSSARSADR 218

Query: 763 XXXXXXXLNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAA 915
                  LNELRAKRL+QQD + H KL++  RG SGSR +SPVKR++FTA+
Sbjct: 219 AAAKDDALNELRAKRLKQQDPEAHNKLRDATRGSSGSRGFSPVKRKTFTAS 269


>XP_011027887.1 PREDICTED: RNA polymerase-associated protein RTF1 homolog [Populus
           euphratica]
          Length = 662

 Score =  133 bits (334), Expect = 5e-31
 Identities = 89/234 (38%), Positives = 117/234 (50%), Gaps = 5/234 (2%)
 Frame = +1

Query: 235 MADLEKLLLEAAGRTG-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRKR 411
           MADLE LLLEAAGRTG +                                     A+RK 
Sbjct: 1   MADLENLLLEAAGRTGKSGRNRNSILPSRRRKREGSYSDGGSDSRDDDSDDDRAYANRKP 60

Query: 412 SSSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LYKDEDDRRKLA 585
           S SQVPLKKRL                                     LYKDEDDR+KLA
Sbjct: 61  SGSQVPLKKRLETNERDEEEGSQDEGDYDGGGSDREGGSSDESDIGDDLYKDEDDRKKLA 120

Query: 586 QMTELEREMILSERSTKITDKKMQEKLR--KQKEKMTQSRKDSPPXXXXXXXXXXXXXXX 759
           QM+EL+RE+IL++R+ K  DK + EK+R  +  +K T+SRK++PP               
Sbjct: 121 QMSELDRELILADRADKKGDKHLTEKIRLKRDNDKPTRSRKETPPLPSTRGVRSSARSAD 180

Query: 760 XXXXXXXXLNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAI 921
                   LNELRAKRL+QQD + HRKL++V+RG +GSR +S VK+ +FT+A++
Sbjct: 181 RAAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGSAGSRGFSQVKKNNFTSASL 234


>XP_002305685.1 plus-3 domain-containing family protein [Populus trichocarpa]
           EEE86196.1 plus-3 domain-containing family protein
           [Populus trichocarpa]
          Length = 662

 Score =  133 bits (334), Expect = 5e-31
 Identities = 89/234 (38%), Positives = 117/234 (50%), Gaps = 5/234 (2%)
 Frame = +1

Query: 235 MADLEKLLLEAAGRTG-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRKR 411
           MADLE LLLEAAGRTG +                                     A+RK 
Sbjct: 1   MADLENLLLEAAGRTGKSGRNRNSILPSRRRKREGSYSDGGSDSRDDDSDDDRGYANRKP 60

Query: 412 SSSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LYKDEDDRRKLA 585
           S SQVPLKKRL                                     LYKDEDDR+KLA
Sbjct: 61  SGSQVPLKKRLETNERDGEEGSQDEGDYDGGGSDREGGSSDESDIGDDLYKDEDDRKKLA 120

Query: 586 QMTELEREMILSERSTKITDKKMQEKLR--KQKEKMTQSRKDSPPXXXXXXXXXXXXXXX 759
           QM+EL+RE+IL++R+ K  DK + EK+R  +  +K T+SRK++PP               
Sbjct: 121 QMSELDRELILADRADKKGDKHLTEKIRLKRDNDKPTRSRKETPPLPSSRGVRSSARSAD 180

Query: 760 XXXXXXXXLNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAI 921
                   LNELRAKRL+QQD + HRKL++V+RG +GSR +S VK+ +FT+A++
Sbjct: 181 RAAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGSAGSRGFSQVKKNNFTSASL 234


>XP_011047833.1 PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform
           X2 [Populus euphratica] XP_011047834.1 PREDICTED: RNA
           polymerase-associated protein RTF1 homolog isoform X2
           [Populus euphratica] XP_011047836.1 PREDICTED: RNA
           polymerase-associated protein RTF1 homolog isoform X2
           [Populus euphratica]
          Length = 666

 Score =  132 bits (333), Expect = 7e-31
 Identities = 89/235 (37%), Positives = 117/235 (49%), Gaps = 5/235 (2%)
 Frame = +1

Query: 232 TMADLEKLLLEAAGRTG-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRK 408
           TMADLE LLLEAAGRTG +                                     ASRK
Sbjct: 2   TMADLENLLLEAAGRTGKSGRNRNSLPPSRRRKQEGSYSDGGSDSRDDGSDDDRGYASRK 61

Query: 409 RSSSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LYKDEDDRRKL 582
            S SQVPLKKRL                                     LYKDEDDR+KL
Sbjct: 62  PSGSQVPLKKRLETNERDDEGGGQEEGDYDDGGSYREGESSDASDIGDDLYKDEDDRQKL 121

Query: 583 AQMTELEREMILSERSTKITDKKMQEKLRKQKE--KMTQSRKDSPPXXXXXXXXXXXXXX 756
           AQM+EL+RE+IL++R+ K  DK + EK+R +++  K T+SRK++PP              
Sbjct: 122 AQMSELDRELILADRADKKGDKHLTEKIRSKRDNDKPTRSRKETPPLPSLRGVRSSARSA 181

Query: 757 XXXXXXXXXLNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAI 921
                    LNELRAKRL+QQD + HRKL++ +RG +GSR ++ VK+ +FT+A +
Sbjct: 182 DRAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSAGSRGFAQVKKNNFTSARL 236


>XP_011047832.1 PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform
           X1 [Populus euphratica]
          Length = 695

 Score =  132 bits (333), Expect = 7e-31
 Identities = 89/235 (37%), Positives = 117/235 (49%), Gaps = 5/235 (2%)
 Frame = +1

Query: 232 TMADLEKLLLEAAGRTG-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRK 408
           TMADLE LLLEAAGRTG +                                     ASRK
Sbjct: 31  TMADLENLLLEAAGRTGKSGRNRNSLPPSRRRKQEGSYSDGGSDSRDDGSDDDRGYASRK 90

Query: 409 RSSSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LYKDEDDRRKL 582
            S SQVPLKKRL                                     LYKDEDDR+KL
Sbjct: 91  PSGSQVPLKKRLETNERDDEGGGQEEGDYDDGGSYREGESSDASDIGDDLYKDEDDRQKL 150

Query: 583 AQMTELEREMILSERSTKITDKKMQEKLRKQKE--KMTQSRKDSPPXXXXXXXXXXXXXX 756
           AQM+EL+RE+IL++R+ K  DK + EK+R +++  K T+SRK++PP              
Sbjct: 151 AQMSELDRELILADRADKKGDKHLTEKIRSKRDNDKPTRSRKETPPLPSLRGVRSSARSA 210

Query: 757 XXXXXXXXXLNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAI 921
                    LNELRAKRL+QQD + HRKL++ +RG +GSR ++ VK+ +FT+A +
Sbjct: 211 DRAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSAGSRGFAQVKKNNFTSARL 265