BLASTX nr result
ID: Panax25_contig00001308
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00001308
(1306 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_002282635.1 PREDICTED: putative exosome complex component rrp... 306 e-101
XP_017249653.1 PREDICTED: putative exosome complex component rrp... 308 e-100
XP_012080072.1 PREDICTED: putative exosome complex component rrp... 305 e-100
XP_002318044.1 exonuclease-related family protein [Populus trich... 305 5e-99
XP_012478611.1 PREDICTED: putative exosome complex component rrp... 303 5e-99
XP_011071845.1 PREDICTED: putative exosome complex component rrp... 304 9e-99
XP_010251261.1 PREDICTED: putative exosome complex component rrp... 301 1e-98
XP_011044305.1 PREDICTED: putative exosome complex component rrp... 303 1e-98
XP_012478610.1 PREDICTED: putative exosome complex component rrp... 303 2e-98
XP_018821286.1 PREDICTED: putative exosome complex component rrp... 303 3e-98
OMO81471.1 Exosome complex RNA-binding protein 1/RRP40/RRP4 [Cor... 302 4e-98
CDP12399.1 unnamed protein product [Coffea canephora] 302 4e-98
XP_016721111.1 PREDICTED: putative exosome complex component rrp... 300 3e-97
XP_016666803.1 PREDICTED: putative exosome complex component rrp... 300 4e-97
EOY20706.1 PNAS-3 related isoform 3 [Theobroma cacao] 298 9e-97
XP_007036203.1 PREDICTED: putative exosome complex component rrp... 298 1e-96
ONI08375.1 hypothetical protein PRUPE_5G174300 [Prunus persica] 298 3e-96
XP_007209525.1 hypothetical protein PRUPE_ppa010609mg [Prunus pe... 298 3e-96
XP_003518749.1 PREDICTED: putative exosome complex component rrp... 297 3e-96
XP_006476772.1 PREDICTED: putative exosome complex component rrp... 292 7e-96
>XP_002282635.1 PREDICTED: putative exosome complex component rrp40 isoform X1
[Vitis vinifera] CBI15022.3 unnamed protein product,
partial [Vitis vinifera]
Length = 237
Score = 306 bits (784), Expect(2) = e-101
Identities = 151/174 (86%), Positives = 158/174 (90%)
Frame = +1
Query: 100 NSPTVYVDQLVVPGDVVLDLSTMTNQAIKLGGSLRQDCDAITVIKAGKLRFSKPNKYWVE 279
N+P +VDQLVVPGDVVLDLS M NQ IKLGG L QDCDAITV KAG+LRFSKPNKYWVE
Sbjct: 4 NTPASFVDQLVVPGDVVLDLSKMGNQTIKLGGGLHQDCDAITVTKAGRLRFSKPNKYWVE 63
Query: 280 SSQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVGTLL 459
SSQKRYVP V D VLG+VVD+KADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFE GTLL
Sbjct: 64 SSQKRYVPCVEDTVLGIVVDSKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLL 123
Query: 460 YVRIVKANAGMNPELACMDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPACSV 621
YVR+VKAN GMNPEL+C DASGKAAEFGPLKDGYMFESSTGLSRMLLSSP C V
Sbjct: 124 YVRVVKANTGMNPELSCTDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPTCPV 177
Score = 91.7 bits (226), Expect(2) = e-101
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = +3
Query: 624 LSFEIAVGLNGRVWVKAASPSTVILVANAITNSESLSGVQQKIMVDKLLQRMQ 782
LSFEIAVGLNGRVWV A+SPSTVILVANAI NSESLS VQQKIMVDKLLQR+Q
Sbjct: 185 LSFEIAVGLNGRVWVNASSPSTVILVANAIMNSESLSVVQQKIMVDKLLQRIQ 237
>XP_017249653.1 PREDICTED: putative exosome complex component rrp40 isoform X1
[Daucus carota subsp. sativus] KZM93240.1 hypothetical
protein DCAR_016485 [Daucus carota subsp. sativus]
Length = 241
Score = 308 bits (788), Expect = e-100
Identities = 148/178 (83%), Positives = 165/178 (92%)
Frame = +1
Query: 88 AKSANSPTVYVDQLVVPGDVVLDLSTMTNQAIKLGGSLRQDCDAITVIKAGKLRFSKPNK 267
A+ N+ Y+D+LVVPGDVVLDLS+M+NQ IKLGG LRQDCD+IT +KAG LRFSKPNK
Sbjct: 4 AEPTNNSPSYIDKLVVPGDVVLDLSSMSNQTIKLGGGLRQDCDSITAMKAGMLRFSKPNK 63
Query: 268 YWVESSQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEV 447
YWVESSQKRYVPS GD VLG+VVDTKA+NFL+DIKGPALA+LPVLAFEGGTRRNIPKFEV
Sbjct: 64 YWVESSQKRYVPSAGDAVLGIVVDTKAENFLIDIKGPALAYLPVLAFEGGTRRNIPKFEV 123
Query: 448 GTLLYVRIVKANAGMNPELACMDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPACSV 621
GTL+YVR+VKAN GMNP+L+CMDASGKAAEFGPLKDGYMFE+STGLSRMLLSSPAC V
Sbjct: 124 GTLIYVRVVKANIGMNPDLSCMDASGKAAEFGPLKDGYMFETSTGLSRMLLSSPACPV 181
Score = 87.8 bits (216), Expect = 4e-16
Identities = 44/53 (83%), Positives = 49/53 (92%)
Frame = +3
Query: 624 LSFEIAVGLNGRVWVKAASPSTVILVANAITNSESLSGVQQKIMVDKLLQRMQ 782
LSFEIAVGLNGRVWV AA+PSTVILV+NAI NSE+L+ VQQK+MVDKLLQR Q
Sbjct: 189 LSFEIAVGLNGRVWVNAAAPSTVILVSNAIMNSETLTSVQQKLMVDKLLQRTQ 241
>XP_012080072.1 PREDICTED: putative exosome complex component rrp40 [Jatropha
curcas] KDP31104.1 hypothetical protein JCGZ_11480
[Jatropha curcas]
Length = 241
Score = 305 bits (780), Expect(2) = e-100
Identities = 150/180 (83%), Positives = 163/180 (90%)
Frame = +1
Query: 82 MEAKSANSPTVYVDQLVVPGDVVLDLSTMTNQAIKLGGSLRQDCDAITVIKAGKLRFSKP 261
MEAK ++SPT VD+LVVPGDVV+DLSTM+NQ IKLGG LRQDCDAI+V K+GKLRFSKP
Sbjct: 1 MEAKPSSSPTSLVDKLVVPGDVVIDLSTMSNQTIKLGGGLRQDCDAISVTKSGKLRFSKP 60
Query: 262 NKYWVESSQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKF 441
NKYWVE SQKRYVP D+VLG+VVD+KA+NFLVDIKGP LAFLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWVEGSQKRYVPCAEDSVLGIVVDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKF 120
Query: 442 EVGTLLYVRIVKANAGMNPELACMDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPACSV 621
EVGTLLYVR+VKAN GMNPEL+C DASGKAAEFG LKDGYMFE STGLSRMLLSSP C V
Sbjct: 121 EVGTLLYVRVVKANPGMNPELSCTDASGKAAEFGVLKDGYMFECSTGLSRMLLSSPTCPV 180
Score = 90.5 bits (223), Expect(2) = e-100
Identities = 46/57 (80%), Positives = 52/57 (91%)
Frame = +3
Query: 612 LFSXLSFEIAVGLNGRVWVKAASPSTVILVANAITNSESLSGVQQKIMVDKLLQRMQ 782
L + LSFEIAVGLNGRVWV A SPSTVI+VANAI NSE+LSGVQQKIMV+KLLQ++Q
Sbjct: 184 LGNKLSFEIAVGLNGRVWVNATSPSTVIIVANAIMNSETLSGVQQKIMVEKLLQKIQ 240
>XP_002318044.1 exonuclease-related family protein [Populus trichocarpa] ABK93275.1
unknown [Populus trichocarpa] EEE96264.1
exonuclease-related family protein [Populus trichocarpa]
Length = 242
Score = 305 bits (780), Expect = 5e-99
Identities = 147/180 (81%), Positives = 163/180 (90%)
Frame = +1
Query: 82 MEAKSANSPTVYVDQLVVPGDVVLDLSTMTNQAIKLGGSLRQDCDAITVIKAGKLRFSKP 261
ME+KS+ SP ++D LVVPGDVV+DLS+MTNQ IKLG LRQDCDAI+V+KAGKLRFSKP
Sbjct: 1 MESKSSGSPATFIDNLVVPGDVVVDLSSMTNQTIKLGSGLRQDCDAISVMKAGKLRFSKP 60
Query: 262 NKYWVESSQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKF 441
NKYWVE+SQKRYVP D+VLG+VVD+K+DNFL+DIKGPALAFLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWVETSQKRYVPCAEDSVLGIVVDSKSDNFLIDIKGPALAFLPVLAFEGGTRRNIPKF 120
Query: 442 EVGTLLYVRIVKANAGMNPELACMDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPACSV 621
E GTLLYVR+VKAN GMNPEL+C DASGKAAEFG LKDGYMFE STGLSRMLLSSP C V
Sbjct: 121 EAGTLLYVRVVKANPGMNPELSCTDASGKAAEFGALKDGYMFECSTGLSRMLLSSPTCPV 180
Score = 85.5 bits (210), Expect = 2e-15
Identities = 43/53 (81%), Positives = 48/53 (90%)
Frame = +3
Query: 624 LSFEIAVGLNGRVWVKAASPSTVILVANAITNSESLSGVQQKIMVDKLLQRMQ 782
LSFEIAVGLNGRVWV A SPS VI+VANAI NSE+LSGVQQKIM +KLLQ++Q
Sbjct: 188 LSFEIAVGLNGRVWVNANSPSIVIIVANAIMNSETLSGVQQKIMAEKLLQKIQ 240
>XP_012478611.1 PREDICTED: putative exosome complex component rrp40 isoform X2
[Gossypium raimondii] KJB30310.1 hypothetical protein
B456_005G137000 [Gossypium raimondii]
Length = 202
Score = 303 bits (776), Expect = 5e-99
Identities = 146/180 (81%), Positives = 162/180 (90%)
Frame = +1
Query: 82 MEAKSANSPTVYVDQLVVPGDVVLDLSTMTNQAIKLGGSLRQDCDAITVIKAGKLRFSKP 261
ME K ++SP +VD VVPGDVVLDLS+MTNQ IKLGG LRQDCDAI+ +KAG LRFSKP
Sbjct: 1 MENKQSSSPASFVDSTVVPGDVVLDLSSMTNQTIKLGGGLRQDCDAISAMKAGTLRFSKP 60
Query: 262 NKYWVESSQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKF 441
NKYW+ESSQKRYVP V D +LG+VVD+KADNFL+DIKGPA+ FLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWIESSQKRYVPCVEDTILGIVVDSKADNFLIDIKGPAMGFLPVLAFEGGTRRNIPKF 120
Query: 442 EVGTLLYVRIVKANAGMNPELACMDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPACSV 621
EVGTLLY+R+VKAN GMNPEL+C DASGKAAEFGPLKDGYMFE+STGLSR LLSSPAC V
Sbjct: 121 EVGTLLYLRVVKANFGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRKLLSSPACPV 180
>XP_011071845.1 PREDICTED: putative exosome complex component rrp40 [Sesamum
indicum] XP_011071846.1 PREDICTED: putative exosome
complex component rrp40 [Sesamum indicum] XP_011071847.1
PREDICTED: putative exosome complex component rrp40
[Sesamum indicum]
Length = 240
Score = 304 bits (778), Expect = 9e-99
Identities = 149/180 (82%), Positives = 162/180 (90%)
Frame = +1
Query: 82 MEAKSANSPTVYVDQLVVPGDVVLDLSTMTNQAIKLGGSLRQDCDAITVIKAGKLRFSKP 261
ME+K + SP+ +VDQ V PGDVVLDLS MTNQ IKLGG LRQD D I+V+KAGKLRFSKP
Sbjct: 1 MESKPSVSPSSFVDQQVFPGDVVLDLSKMTNQTIKLGGGLRQDGDVISVMKAGKLRFSKP 60
Query: 262 NKYWVESSQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKF 441
NKYWVESS KRYVPS GDNVLG+VVD KADNFLVDIKGP LAFLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWVESSHKRYVPSAGDNVLGIVVDAKADNFLVDIKGPMLAFLPVLAFEGGTRRNIPKF 120
Query: 442 EVGTLLYVRIVKANAGMNPELACMDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPACSV 621
E+GTLLYVR+VKAN GMNPEL+CMDASGKAAE+GPLKDG+MFESSTGLSR LLS+P C V
Sbjct: 121 EIGTLLYVRVVKANTGMNPELSCMDASGKAAEYGPLKDGFMFESSTGLSRTLLSTPTCPV 180
Score = 75.9 bits (185), Expect = 5e-12
Identities = 37/53 (69%), Positives = 43/53 (81%)
Frame = +3
Query: 624 LSFEIAVGLNGRVWVKAASPSTVILVANAITNSESLSGVQQKIMVDKLLQRMQ 782
L+FEIAVGLNGRVWV A SPS ++LVAN I +ESLS QQKI V+ LLQR+Q
Sbjct: 188 LAFEIAVGLNGRVWVNATSPSVIVLVANTIMQTESLSPAQQKIKVENLLQRLQ 240
>XP_010251261.1 PREDICTED: putative exosome complex component rrp40 isoform X1
[Nelumbo nucifera]
Length = 243
Score = 301 bits (770), Expect(2) = 1e-98
Identities = 146/180 (81%), Positives = 162/180 (90%)
Frame = +1
Query: 82 MEAKSANSPTVYVDQLVVPGDVVLDLSTMTNQAIKLGGSLRQDCDAITVIKAGKLRFSKP 261
M+ +S N T ++DQ+VVPGDVVLDLS+M+NQ IKLGG LRQDCD I+V+KAGKL+FSKP
Sbjct: 1 MDDRSLNLTTSFIDQIVVPGDVVLDLSSMSNQTIKLGGGLRQDCDTISVMKAGKLKFSKP 60
Query: 262 NKYWVESSQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKF 441
NKYWVESSQKRYVP V D +LG VVD+KADNFLVDIKGP LAFLPVLAFEGGTRRNIPK+
Sbjct: 61 NKYWVESSQKRYVPCVEDTILGTVVDSKADNFLVDIKGPTLAFLPVLAFEGGTRRNIPKY 120
Query: 442 EVGTLLYVRIVKANAGMNPELACMDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPACSV 621
E GTLLYVR+VKANAGMNPEL+C DASGKAAEFG LKDGYMFE+STGLSRMLLSSP C V
Sbjct: 121 EAGTLLYVRVVKANAGMNPELSCTDASGKAAEFGVLKDGYMFETSTGLSRMLLSSPTCPV 180
Score = 89.7 bits (221), Expect(2) = 1e-98
Identities = 44/53 (83%), Positives = 50/53 (94%)
Frame = +3
Query: 624 LSFEIAVGLNGRVWVKAASPSTVILVANAITNSESLSGVQQKIMVDKLLQRMQ 782
LSFEIA+GLNGRVWV AASPSTVILV+NAI NSESLSGVQQ+IMV+KL+Q+ Q
Sbjct: 188 LSFEIAIGLNGRVWVNAASPSTVILVSNAIMNSESLSGVQQRIMVEKLMQKFQ 240
>XP_011044305.1 PREDICTED: putative exosome complex component rrp40 [Populus
euphratica]
Length = 242
Score = 303 bits (777), Expect = 1e-98
Identities = 145/180 (80%), Positives = 164/180 (91%)
Frame = +1
Query: 82 MEAKSANSPTVYVDQLVVPGDVVLDLSTMTNQAIKLGGSLRQDCDAITVIKAGKLRFSKP 261
ME+KS+ SP ++D LVVPGDVV+DLS+MTNQ IKLGG LRQDCDAI+V+KAGKLRFSKP
Sbjct: 1 MESKSSGSPATFIDNLVVPGDVVVDLSSMTNQTIKLGGGLRQDCDAISVMKAGKLRFSKP 60
Query: 262 NKYWVESSQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKF 441
NKYWVE+SQKRYVP D++LG+VVD+K+DNFL+D+KGPALAFLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWVETSQKRYVPCAEDSILGIVVDSKSDNFLIDMKGPALAFLPVLAFEGGTRRNIPKF 120
Query: 442 EVGTLLYVRIVKANAGMNPELACMDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPACSV 621
E GTLLYVR+VKAN GM+PEL+C DASGKAAEFG LKDGYMFE STGLSRMLLSSP C V
Sbjct: 121 EAGTLLYVRVVKANPGMSPELSCTDASGKAAEFGALKDGYMFECSTGLSRMLLSSPTCPV 180
Score = 85.1 bits (209), Expect = 3e-15
Identities = 42/53 (79%), Positives = 48/53 (90%)
Frame = +3
Query: 624 LSFEIAVGLNGRVWVKAASPSTVILVANAITNSESLSGVQQKIMVDKLLQRMQ 782
LSFEIAVGLNGRVWV A SPS VI+VANAI NSE+LSG+QQKIM +KLLQ++Q
Sbjct: 188 LSFEIAVGLNGRVWVNANSPSIVIIVANAIMNSETLSGIQQKIMAEKLLQKIQ 240
>XP_012478610.1 PREDICTED: putative exosome complex component rrp40 isoform X1
[Gossypium raimondii] KJB30309.1 hypothetical protein
B456_005G137000 [Gossypium raimondii]
Length = 240
Score = 303 bits (776), Expect = 2e-98
Identities = 146/180 (81%), Positives = 162/180 (90%)
Frame = +1
Query: 82 MEAKSANSPTVYVDQLVVPGDVVLDLSTMTNQAIKLGGSLRQDCDAITVIKAGKLRFSKP 261
ME K ++SP +VD VVPGDVVLDLS+MTNQ IKLGG LRQDCDAI+ +KAG LRFSKP
Sbjct: 1 MENKQSSSPASFVDSTVVPGDVVLDLSSMTNQTIKLGGGLRQDCDAISAMKAGTLRFSKP 60
Query: 262 NKYWVESSQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKF 441
NKYW+ESSQKRYVP V D +LG+VVD+KADNFL+DIKGPA+ FLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWIESSQKRYVPCVEDTILGIVVDSKADNFLIDIKGPAMGFLPVLAFEGGTRRNIPKF 120
Query: 442 EVGTLLYVRIVKANAGMNPELACMDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPACSV 621
EVGTLLY+R+VKAN GMNPEL+C DASGKAAEFGPLKDGYMFE+STGLSR LLSSPAC V
Sbjct: 121 EVGTLLYLRVVKANFGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRKLLSSPACPV 180
Score = 80.5 bits (197), Expect = 1e-13
Identities = 40/53 (75%), Positives = 45/53 (84%)
Frame = +3
Query: 624 LSFEIAVGLNGRVWVKAASPSTVILVANAITNSESLSGVQQKIMVDKLLQRMQ 782
LSFEIAVGLNGRVWV AASP T+++VANAI NSE LSG QQ IMVD LL+ +Q
Sbjct: 188 LSFEIAVGLNGRVWVNAASPDTIVVVANAIMNSECLSGAQQIIMVDHLLKNIQ 240
>XP_018821286.1 PREDICTED: putative exosome complex component rrp40 [Juglans regia]
Length = 243
Score = 303 bits (775), Expect = 3e-98
Identities = 150/180 (83%), Positives = 160/180 (88%)
Frame = +1
Query: 82 MEAKSANSPTVYVDQLVVPGDVVLDLSTMTNQAIKLGGSLRQDCDAITVIKAGKLRFSKP 261
ME + SP +VDQLVVPGDVVLDL++MTNQ IKLGG LRQDCDAI V KAGKLR SKP
Sbjct: 1 MENNPSGSPASFVDQLVVPGDVVLDLNSMTNQTIKLGGGLRQDCDAIAVTKAGKLRCSKP 60
Query: 262 NKYWVESSQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKF 441
NKYWVESSQKRY P GD+VLG+VVD+KADNFLVDIKGPALA+LPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWVESSQKRYEPHAGDSVLGIVVDSKADNFLVDIKGPALAYLPVLAFEGGTRRNIPKF 120
Query: 442 EVGTLLYVRIVKANAGMNPELACMDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPACSV 621
EVGTLLYVR+VKAN GMNPEL+C DASGKAAEFG LKDGYMFESSTGLSR LLSSP C V
Sbjct: 121 EVGTLLYVRVVKANPGMNPELSCTDASGKAAEFGQLKDGYMFESSTGLSRTLLSSPTCPV 180
Score = 85.5 bits (210), Expect = 2e-15
Identities = 43/53 (81%), Positives = 48/53 (90%)
Frame = +3
Query: 624 LSFEIAVGLNGRVWVKAASPSTVILVANAITNSESLSGVQQKIMVDKLLQRMQ 782
LSFEIAVGLNGRVWV A SPSTVI+VANAI NSESLS VQQ+IMV+KLLQ ++
Sbjct: 188 LSFEIAVGLNGRVWVNATSPSTVIVVANAIMNSESLSAVQQRIMVEKLLQNLK 240
>OMO81471.1 Exosome complex RNA-binding protein 1/RRP40/RRP4 [Corchorus
capsularis]
Length = 240
Score = 302 bits (774), Expect = 4e-98
Identities = 147/180 (81%), Positives = 161/180 (89%)
Frame = +1
Query: 82 MEAKSANSPTVYVDQLVVPGDVVLDLSTMTNQAIKLGGSLRQDCDAITVIKAGKLRFSKP 261
ME K + SP ++D VVPGDVVLDLS+MTNQ IKLGG LRQDCDAI+V+KAG LRF+KP
Sbjct: 1 MEKKESGSPASFIDSTVVPGDVVLDLSSMTNQTIKLGGGLRQDCDAISVMKAGTLRFTKP 60
Query: 262 NKYWVESSQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKF 441
NKYWVESSQKRYVP V D VLG+VVD+KADN L+DIKGPALAFLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWVESSQKRYVPCVEDTVLGIVVDSKADNLLIDIKGPALAFLPVLAFEGGTRRNIPKF 120
Query: 442 EVGTLLYVRIVKANAGMNPELACMDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPACSV 621
EVGTLLY+R+VKAN GMNPEL+C DASGKAAEFGPLKDGYMFE+STGLSR LLSSP C V
Sbjct: 121 EVGTLLYLRVVKANFGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRKLLSSPTCPV 180
Score = 75.5 bits (184), Expect = 7e-12
Identities = 37/53 (69%), Positives = 44/53 (83%)
Frame = +3
Query: 624 LSFEIAVGLNGRVWVKAASPSTVILVANAITNSESLSGVQQKIMVDKLLQRMQ 782
+SFEIAVGLNGR WV AASP T+I+VANAI NSESLS QQ IMV+ LL+ ++
Sbjct: 188 ISFEIAVGLNGRAWVNAASPETIIVVANAIMNSESLSAAQQIIMVEHLLKNIE 240
>CDP12399.1 unnamed protein product [Coffea canephora]
Length = 240
Score = 302 bits (774), Expect = 4e-98
Identities = 149/180 (82%), Positives = 162/180 (90%)
Frame = +1
Query: 82 MEAKSANSPTVYVDQLVVPGDVVLDLSTMTNQAIKLGGSLRQDCDAITVIKAGKLRFSKP 261
ME+K ++SP ++DQ VVPGDVVLDLSTMTNQ IKLG LRQD DAI+ IKAG LRF+KP
Sbjct: 1 MESKPSSSPPNFIDQQVVPGDVVLDLSTMTNQTIKLGSGLRQDGDAISAIKAGVLRFAKP 60
Query: 262 NKYWVESSQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKF 441
NKYWVESSQKRYVP GD VLG+VVD+++DNFLVDIKGP LAFLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWVESSQKRYVPCAGDTVLGIVVDSRSDNFLVDIKGPTLAFLPVLAFEGGTRRNIPKF 120
Query: 442 EVGTLLYVRIVKANAGMNPELACMDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPACSV 621
EVGTLLYVR+VKAN GMNPEL+CMDASGKAAEFG LKDGYMFESSTGLSRMLLSSP C V
Sbjct: 121 EVGTLLYVRVVKANVGMNPELSCMDASGKAAEFGRLKDGYMFESSTGLSRMLLSSPTCPV 180
Score = 78.6 bits (192), Expect = 6e-13
Identities = 39/53 (73%), Positives = 46/53 (86%)
Frame = +3
Query: 624 LSFEIAVGLNGRVWVKAASPSTVILVANAITNSESLSGVQQKIMVDKLLQRMQ 782
LSFEIAVGLNGRVWV A SP+ +ILVANAI SESLS VQQK +V++LL+R+Q
Sbjct: 188 LSFEIAVGLNGRVWVNAESPANLILVANAIMKSESLSAVQQKFLVERLLKRVQ 240
>XP_016721111.1 PREDICTED: putative exosome complex component rrp40 [Gossypium
hirsutum]
Length = 240
Score = 300 bits (768), Expect = 3e-97
Identities = 145/180 (80%), Positives = 160/180 (88%)
Frame = +1
Query: 82 MEAKSANSPTVYVDQLVVPGDVVLDLSTMTNQAIKLGGSLRQDCDAITVIKAGKLRFSKP 261
ME K ++SP +VD VVPGDVVLDLS+MTNQ IKLGG LRQDCDAI+ KAG LRFSKP
Sbjct: 1 MENKQSSSPASFVDSTVVPGDVVLDLSSMTNQTIKLGGGLRQDCDAISATKAGTLRFSKP 60
Query: 262 NKYWVESSQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKF 441
NKYW+ESSQKRYVP V D +LG+VVD+KADNFL+DIKGPA+ FLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWIESSQKRYVPCVEDTILGIVVDSKADNFLIDIKGPAMGFLPVLAFEGGTRRNIPKF 120
Query: 442 EVGTLLYVRIVKANAGMNPELACMDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPACSV 621
EVGTLLY+R+VKAN GMNPEL+C DASGKAAEFGPLKDGYMFE+STGL R LLSSPAC V
Sbjct: 121 EVGTLLYLRVVKANFGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLLRKLLSSPACPV 180
Score = 80.5 bits (197), Expect = 1e-13
Identities = 40/53 (75%), Positives = 45/53 (84%)
Frame = +3
Query: 624 LSFEIAVGLNGRVWVKAASPSTVILVANAITNSESLSGVQQKIMVDKLLQRMQ 782
LSFEIAVGLNGRVWV AASP T+++VANAI NSE LSG QQ IMVD LL+ +Q
Sbjct: 188 LSFEIAVGLNGRVWVNAASPDTIVVVANAIMNSECLSGAQQIIMVDHLLKNIQ 240
>XP_016666803.1 PREDICTED: putative exosome complex component rrp40 isoform X2
[Gossypium hirsutum] XP_017635430.1 PREDICTED: putative
exosome complex component rrp40 isoform X2 [Gossypium
arboreum]
Length = 240
Score = 300 bits (767), Expect = 4e-97
Identities = 144/180 (80%), Positives = 161/180 (89%)
Frame = +1
Query: 82 MEAKSANSPTVYVDQLVVPGDVVLDLSTMTNQAIKLGGSLRQDCDAITVIKAGKLRFSKP 261
ME K ++SP +VD VVPGDVVLDLS+MT+Q IKLGG LRQDCDAI+ +KAG LRFSKP
Sbjct: 1 MENKQSSSPASFVDSTVVPGDVVLDLSSMTSQTIKLGGGLRQDCDAISAMKAGTLRFSKP 60
Query: 262 NKYWVESSQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKF 441
NKYW+ESSQKRYVP V D +LG+VVD+KADNFL+DIKGPA+ FLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWIESSQKRYVPCVEDTILGIVVDSKADNFLIDIKGPAMGFLPVLAFEGGTRRNIPKF 120
Query: 442 EVGTLLYVRIVKANAGMNPELACMDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPACSV 621
EVGTLLY+R+VKAN GMNPEL+C DASGKAAEFGPLKDGYMFE+STGLSR LLSSP C V
Sbjct: 121 EVGTLLYLRVVKANFGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRKLLSSPTCPV 180
Score = 82.4 bits (202), Expect = 3e-14
Identities = 41/53 (77%), Positives = 46/53 (86%)
Frame = +3
Query: 624 LSFEIAVGLNGRVWVKAASPSTVILVANAITNSESLSGVQQKIMVDKLLQRMQ 782
LSFEIAVGLNGRVWV AASP T+++VANAI NSESLSG QQ IMVD LL+ +Q
Sbjct: 188 LSFEIAVGLNGRVWVNAASPDTIVVVANAIMNSESLSGAQQIIMVDHLLKNIQ 240
>EOY20706.1 PNAS-3 related isoform 3 [Theobroma cacao]
Length = 230
Score = 298 bits (764), Expect = 9e-97
Identities = 146/180 (81%), Positives = 158/180 (87%)
Frame = +1
Query: 82 MEAKSANSPTVYVDQLVVPGDVVLDLSTMTNQAIKLGGSLRQDCDAITVIKAGKLRFSKP 261
ME K + SP +D VVPGDVVLDLS+MTNQ I LGG LRQDCDAI+V+KAG LRFSKP
Sbjct: 1 MEKKQSGSPPSLIDSTVVPGDVVLDLSSMTNQTIMLGGGLRQDCDAISVMKAGTLRFSKP 60
Query: 262 NKYWVESSQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKF 441
NKYWVESSQKRY P V D VLG+VVD+KADNFL+DIKGP LAFLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWVESSQKRYTPCVEDTVLGIVVDSKADNFLIDIKGPVLAFLPVLAFEGGTRRNIPKF 120
Query: 442 EVGTLLYVRIVKANAGMNPELACMDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPACSV 621
EVGTLLY+R+VKAN GMNPEL+C DASGKAAEFGPLKDGYMFE+STGLSR LLSSP C V
Sbjct: 121 EVGTLLYLRVVKANFGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRKLLSSPTCPV 180
>XP_007036203.1 PREDICTED: putative exosome complex component rrp40 isoform X1
[Theobroma cacao] EOY20704.1 PNAS-3 related isoform 1
[Theobroma cacao]
Length = 240
Score = 298 bits (764), Expect = 1e-96
Identities = 146/180 (81%), Positives = 158/180 (87%)
Frame = +1
Query: 82 MEAKSANSPTVYVDQLVVPGDVVLDLSTMTNQAIKLGGSLRQDCDAITVIKAGKLRFSKP 261
ME K + SP +D VVPGDVVLDLS+MTNQ I LGG LRQDCDAI+V+KAG LRFSKP
Sbjct: 1 MEKKQSGSPPSLIDSTVVPGDVVLDLSSMTNQTIMLGGGLRQDCDAISVMKAGTLRFSKP 60
Query: 262 NKYWVESSQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKF 441
NKYWVESSQKRY P V D VLG+VVD+KADNFL+DIKGP LAFLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWVESSQKRYTPCVEDTVLGIVVDSKADNFLIDIKGPVLAFLPVLAFEGGTRRNIPKF 120
Query: 442 EVGTLLYVRIVKANAGMNPELACMDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPACSV 621
EVGTLLY+R+VKAN GMNPEL+C DASGKAAEFGPLKDGYMFE+STGLSR LLSSP C V
Sbjct: 121 EVGTLLYLRVVKANFGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRKLLSSPTCPV 180
Score = 79.7 bits (195), Expect = 2e-13
Identities = 39/53 (73%), Positives = 46/53 (86%)
Frame = +3
Query: 624 LSFEIAVGLNGRVWVKAASPSTVILVANAITNSESLSGVQQKIMVDKLLQRMQ 782
LSFEIAVGLNGRVWV AA+P T+++VANAI NSESLSG QQ IMV+ LL+ +Q
Sbjct: 188 LSFEIAVGLNGRVWVNAATPDTIVVVANAIMNSESLSGAQQIIMVEHLLKNIQ 240
>ONI08375.1 hypothetical protein PRUPE_5G174300 [Prunus persica]
Length = 243
Score = 298 bits (762), Expect = 3e-96
Identities = 143/180 (79%), Positives = 159/180 (88%)
Frame = +1
Query: 82 MEAKSANSPTVYVDQLVVPGDVVLDLSTMTNQAIKLGGSLRQDCDAITVIKAGKLRFSKP 261
M K+ SP +VDQ VVPGDVVLDL++M NQ IKLGG LRQDCDAI +KAG L+FSKP
Sbjct: 1 MAEKATGSPASFVDQSVVPGDVVLDLTSMANQTIKLGGGLRQDCDAIAAMKAGTLKFSKP 60
Query: 262 NKYWVESSQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKF 441
NKYWVE+SQKRYVP GD+VLG+V D+KADNFLVDIKGP +AFLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWVETSQKRYVPCAGDSVLGIVADSKADNFLVDIKGPTIAFLPVLAFEGGTRRNIPKF 120
Query: 442 EVGTLLYVRIVKANAGMNPELACMDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPACSV 621
EVGTLLYVR+VKAN GMNPEL+C+DASGKAAE+GPLKDGYMFE STGLS+MLLSSP C V
Sbjct: 121 EVGTLLYVRVVKANPGMNPELSCIDASGKAAEYGPLKDGYMFECSTGLSKMLLSSPRCPV 180
Score = 82.4 bits (202), Expect = 3e-14
Identities = 39/53 (73%), Positives = 47/53 (88%)
Frame = +3
Query: 624 LSFEIAVGLNGRVWVKAASPSTVILVANAITNSESLSGVQQKIMVDKLLQRMQ 782
+SFE A+GLNGRVWV A SPSTV +VANAI N+ESLSGVQQ+IMVDKL+Q ++
Sbjct: 188 ISFETAIGLNGRVWVNAGSPSTVTVVANAIMNAESLSGVQQRIMVDKLIQNLK 240
>XP_007209525.1 hypothetical protein PRUPE_ppa010609mg [Prunus persica]
Length = 243
Score = 298 bits (762), Expect = 3e-96
Identities = 143/180 (79%), Positives = 159/180 (88%)
Frame = +1
Query: 82 MEAKSANSPTVYVDQLVVPGDVVLDLSTMTNQAIKLGGSLRQDCDAITVIKAGKLRFSKP 261
M K+ SP +VDQ VVPGDVVLDL++M NQ IKLGG LRQDCDAI +KAG L+FSKP
Sbjct: 1 MAEKATGSPASFVDQSVVPGDVVLDLTSMANQTIKLGGGLRQDCDAIAAMKAGTLKFSKP 60
Query: 262 NKYWVESSQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKF 441
NKYWVE+SQKRYVP GD+VLG+V D+KADNFLVDIKGP +AFLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWVETSQKRYVPCAGDSVLGIVADSKADNFLVDIKGPTIAFLPVLAFEGGTRRNIPKF 120
Query: 442 EVGTLLYVRIVKANAGMNPELACMDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPACSV 621
EVGTLLYVR+VKAN GMNPEL+C+DASGKAAE+GPLKDGYMFE STGLS+MLLSSP C V
Sbjct: 121 EVGTLLYVRVVKANPGMNPELSCIDASGKAAEYGPLKDGYMFECSTGLSKMLLSSPRCPV 180
Score = 82.4 bits (202), Expect = 3e-14
Identities = 39/53 (73%), Positives = 47/53 (88%)
Frame = +3
Query: 624 LSFEIAVGLNGRVWVKAASPSTVILVANAITNSESLSGVQQKIMVDKLLQRMQ 782
+SFE A+GLNGRVWV A SPSTV +VANAI N+ESLSGVQQ+IMVDKL+Q ++
Sbjct: 188 ISFETAIGLNGRVWVNAGSPSTVTVVANAIMNAESLSGVQQRIMVDKLIQNLK 240
>XP_003518749.1 PREDICTED: putative exosome complex component rrp40 [Glycine max]
XP_006574927.1 PREDICTED: putative exosome complex
component rrp40 [Glycine max] KHN01995.1 Putative
exosome complex component rrp40 [Glycine soja]
KRH70818.1 hypothetical protein GLYMA_02G112000 [Glycine
max] KRH70819.1 hypothetical protein GLYMA_02G112000
[Glycine max]
Length = 240
Score = 297 bits (761), Expect = 3e-96
Identities = 144/180 (80%), Positives = 161/180 (89%)
Frame = +1
Query: 82 MEAKSANSPTVYVDQLVVPGDVVLDLSTMTNQAIKLGGSLRQDCDAITVIKAGKLRFSKP 261
ME KS++S T VDQ V PGDV+LDLS MTNQ IKLGG LRQDCDAI+V+KAG+LRFSKP
Sbjct: 1 METKSSSSSTNLVDQSVCPGDVILDLSNMTNQTIKLGGGLRQDCDAISVMKAGRLRFSKP 60
Query: 262 NKYWVESSQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKF 441
NKYWVE+SQKRYVP D+VLG+VVD+++DNFLVDIKGPALAFLPVLAFEGGTRRNIP+F
Sbjct: 61 NKYWVENSQKRYVPHAEDSVLGIVVDSRSDNFLVDIKGPALAFLPVLAFEGGTRRNIPRF 120
Query: 442 EVGTLLYVRIVKANAGMNPELACMDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPACSV 621
E+GTL+Y R+VKAN GMNPELAC DASGKAAEFG LKDGYMFE +TGLSRMLLSSP C V
Sbjct: 121 EIGTLIYARVVKANPGMNPELACTDASGKAAEFGALKDGYMFECTTGLSRMLLSSPTCPV 180
Score = 83.6 bits (205), Expect = 1e-14
Identities = 41/52 (78%), Positives = 47/52 (90%)
Frame = +3
Query: 624 LSFEIAVGLNGRVWVKAASPSTVILVANAITNSESLSGVQQKIMVDKLLQRM 779
LSFEIAVGLNGRVWV AASP T I+VANAI NSE+LSG QQ+IMV+KLL+R+
Sbjct: 188 LSFEIAVGLNGRVWVSAASPQTTIVVANAIMNSETLSGAQQRIMVEKLLERI 239
>XP_006476772.1 PREDICTED: putative exosome complex component rrp40 [Citrus
sinensis] XP_006476773.1 PREDICTED: putative exosome
complex component rrp40 [Citrus sinensis] XP_015385315.1
PREDICTED: putative exosome complex component rrp40
[Citrus sinensis] XP_015385316.1 PREDICTED: putative
exosome complex component rrp40 [Citrus sinensis]
KDO69672.1 hypothetical protein CISIN_1g026458mg [Citrus
sinensis] KDO69673.1 hypothetical protein
CISIN_1g026458mg [Citrus sinensis]
Length = 238
Score = 292 bits (747), Expect(2) = 7e-96
Identities = 144/180 (80%), Positives = 161/180 (89%)
Frame = +1
Query: 82 MEAKSANSPTVYVDQLVVPGDVVLDLSTMTNQAIKLGGSLRQDCDAITVIKAGKLRFSKP 261
MEAK + + V D++VVPGDVVLDLS+MTNQ IKLGG LRQ+CD+++VIKAGKLRFSKP
Sbjct: 1 MEAKPSTANLV--DKIVVPGDVVLDLSSMTNQTIKLGGGLRQECDSVSVIKAGKLRFSKP 58
Query: 262 NKYWVESSQKRYVPSVGDNVLGVVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKF 441
NKYWVESSQKRYVP V D VLG+VVD KADNF VDI+GP +AFLPVLAFEGGTRRNIPKF
Sbjct: 59 NKYWVESSQKRYVPCVEDTVLGIVVDCKADNFFVDIRGPTIAFLPVLAFEGGTRRNIPKF 118
Query: 442 EVGTLLYVRIVKANAGMNPELACMDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPACSV 621
E+G+LLYVR+VKAN GMNPEL+C DASGKAAEFG LKDGYMFE+STGLSRMLLSSP C V
Sbjct: 119 EIGSLLYVRVVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSTGLSRMLLSSPTCPV 178
Score = 89.0 bits (219), Expect(2) = 7e-96
Identities = 45/53 (84%), Positives = 49/53 (92%)
Frame = +3
Query: 624 LSFEIAVGLNGRVWVKAASPSTVILVANAITNSESLSGVQQKIMVDKLLQRMQ 782
LSFEIAVGLNGRVWV A SPSTV+LV+NAI NSESLS VQQKIMVDKLLQR++
Sbjct: 186 LSFEIAVGLNGRVWVNAESPSTVVLVSNAIMNSESLSAVQQKIMVDKLLQRIK 238