BLASTX nr result
ID: Panax25_contig00000923
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00000923
(1131 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAY86078.1 putative PsbC, partial (chloroplast) [Lagarostrobos f... 59 2e-07
AAY86079.1 putative PsbC, partial (chloroplast) [Lagarostrobos f... 59 2e-07
AAN04612.1 photosystem II CP43 protein, partial (chloroplast) [U... 59 5e-07
AAN04607.1 photosystem II CP43 protein, partial (chloroplast) [P... 59 5e-07
AAN04606.1 photosystem II CP43 protein, partial (chloroplast) [C... 59 5e-07
AAN04608.1 photosystem II CP43 protein, partial (chloroplast) [P... 59 5e-07
AAN04611.1 photosystem II CP43 protein, partial (chloroplast) [U... 59 5e-07
AAN04613.1 photosystem II CP43 protein, partial (chloroplast) [U... 59 5e-07
AAN04610.1 photosystem II CP43 protein, partial (chloroplast) [U... 59 5e-07
ALO20963.1 PsbC, partial (chloroplast) [Microglena monadina] 59 5e-07
AFA27436.1 photosystem II CP43 chlorophyll apoprotein, partial (... 59 6e-07
JAU77791.1 Photosystem II CP43 reaction center protein, partial ... 59 7e-07
ALO21484.1 PsbC, partial (chloroplast) [Lobochlamys culleus] 59 1e-06
OMP13851.1 Photosynthetic reaction centre, L/M [Corchorus olitor... 59 1e-06
AGC01510.1 photosystem II 44 kDa protein, partial (chloroplast) ... 59 1e-06
CAD30707.1 photosystem II protein, partial (chloroplast) [Actini... 59 1e-06
KRH29413.1 hypothetical protein GLYMA_11G114700 [Glycine max] 57 1e-06
BAG11477.1 photosystem II CP43 apoprotein, partial [Lepidodinium... 60 2e-06
CAD30706.1 photosystem II protein, partial (chloroplast) [Actini... 59 2e-06
KYP72630.1 Photosystem II CP43 chlorophyll apoprotein, partial [... 59 2e-06
>AAY86078.1 putative PsbC, partial (chloroplast) [Lagarostrobos franklinii]
Length = 96
Score = 58.9 bits (141), Expect = 2e-07
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +2
Query: 857 GKH*GFHVAHVGLVVFWA*RMNLFEVTHFIPEKPIF 964
GK G HVAH GL+VFWA MNLFEV+HF+PEKP++
Sbjct: 6 GKLLGAHVAHAGLIVFWAGAMNLFEVSHFVPEKPMY 41
>AAY86079.1 putative PsbC, partial (chloroplast) [Lagarostrobos franklinii]
Length = 96
Score = 58.5 bits (140), Expect = 2e-07
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +2
Query: 857 GKH*GFHVAHVGLVVFWA*RMNLFEVTHFIPEKPIF 964
GK G HVAH GL+VFWA MNLFEV HF+PEKP++
Sbjct: 6 GKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMY 41
>AAN04612.1 photosystem II CP43 protein, partial (chloroplast) [Utricularia
adpressa]
Length = 128
Score = 58.5 bits (140), Expect = 5e-07
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +2
Query: 857 GKH*GFHVAHVGLVVFWA*RMNLFEVTHFIPEKPIF 964
GK G HVAH GL+VFWA MNLFEV HF+PEKP++
Sbjct: 47 GKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMY 82
>AAN04607.1 photosystem II CP43 protein, partial (chloroplast) [Pinguicula
grandiflora] AAN04609.1 photosystem II CP43 protein,
partial (chloroplast) [Pinguicula ehlersiae]
Length = 128
Score = 58.5 bits (140), Expect = 5e-07
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +2
Query: 857 GKH*GFHVAHVGLVVFWA*RMNLFEVTHFIPEKPIF 964
GK G HVAH GL+VFWA MNLFEV HF+PEKP++
Sbjct: 47 GKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMY 82
>AAN04606.1 photosystem II CP43 protein, partial (chloroplast) [Columnea sp.
Lindqvist & Albert 30]
Length = 128
Score = 58.5 bits (140), Expect = 5e-07
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +2
Query: 857 GKH*GFHVAHVGLVVFWA*RMNLFEVTHFIPEKPIF 964
GK G HVAH GL+VFWA MNLFEV HF+PEKP++
Sbjct: 47 GKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMY 82
>AAN04608.1 photosystem II CP43 protein, partial (chloroplast) [Pinguicula
gracilis]
Length = 128
Score = 58.5 bits (140), Expect = 5e-07
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +2
Query: 857 GKH*GFHVAHVGLVVFWA*RMNLFEVTHFIPEKPIF 964
GK G HVAH GL+VFWA MNLFEV HF+PEKP++
Sbjct: 47 GKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMY 82
>AAN04611.1 photosystem II CP43 protein, partial (chloroplast) [Utricularia
alpina]
Length = 128
Score = 58.5 bits (140), Expect = 5e-07
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +2
Query: 857 GKH*GFHVAHVGLVVFWA*RMNLFEVTHFIPEKPIF 964
GK G HVAH GL+VFWA MNLFEV HF+PEKP++
Sbjct: 47 GKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMY 82
>AAN04613.1 photosystem II CP43 protein, partial (chloroplast) [Utricularia
geminiscapa]
Length = 128
Score = 58.5 bits (140), Expect = 5e-07
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +2
Query: 857 GKH*GFHVAHVGLVVFWA*RMNLFEVTHFIPEKPIF 964
GK G HVAH GL+VFWA MNLFEV HF+PEKP++
Sbjct: 47 GKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMY 82
>AAN04610.1 photosystem II CP43 protein, partial (chloroplast) [Utricularia
pubescens]
Length = 128
Score = 58.5 bits (140), Expect = 5e-07
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +2
Query: 857 GKH*GFHVAHVGLVVFWA*RMNLFEVTHFIPEKPIF 964
GK G HVAH GL+VFWA MNLFEV HF+PEKP++
Sbjct: 47 GKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMY 82
>ALO20963.1 PsbC, partial (chloroplast) [Microglena monadina]
Length = 144
Score = 58.9 bits (141), Expect = 5e-07
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +2
Query: 857 GKH*GFHVAHVGLVVFWA*RMNLFEVTHFIPEKPIF 964
GK G HVAH GL+VFWA MNLFEV+HF+PEKP++
Sbjct: 35 GKLLGAHVAHAGLIVFWAGAMNLFEVSHFVPEKPMY 70
>AFA27436.1 photosystem II CP43 chlorophyll apoprotein, partial (plastid)
[Navia saxicola]
Length = 138
Score = 58.5 bits (140), Expect = 6e-07
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +2
Query: 857 GKH*GFHVAHVGLVVFWA*RMNLFEVTHFIPEKPIF 964
GK G HVAH GL+VFWA MNLFEV HF+PEKP++
Sbjct: 47 GKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMY 82
>JAU77791.1 Photosystem II CP43 reaction center protein, partial [Noccaea
caerulescens]
Length = 145
Score = 58.5 bits (140), Expect = 7e-07
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +2
Query: 857 GKH*GFHVAHVGLVVFWA*RMNLFEVTHFIPEKPIF 964
GK G HVAH GL+VFWA MNLFEV HF+PEKP++
Sbjct: 46 GKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMY 81
>ALO21484.1 PsbC, partial (chloroplast) [Lobochlamys culleus]
Length = 181
Score = 58.9 bits (141), Expect = 1e-06
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +2
Query: 857 GKH*GFHVAHVGLVVFWA*RMNLFEVTHFIPEKPIF 964
GK G HVAH GL+VFWA MNLFEV+HF+PEKP++
Sbjct: 35 GKLLGAHVAHAGLIVFWAGAMNLFEVSHFVPEKPMY 70
>OMP13851.1 Photosynthetic reaction centre, L/M [Corchorus olitorius]
Length = 165
Score = 58.5 bits (140), Expect = 1e-06
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +2
Query: 857 GKH*GFHVAHVGLVVFWA*RMNLFEVTHFIPEKPIF 964
GK G HVAH GL+VFWA MNLFEV HF+PEKP++
Sbjct: 114 GKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMY 149
>AGC01510.1 photosystem II 44 kDa protein, partial (chloroplast) [Sciadopitys
verticillata]
Length = 180
Score = 58.5 bits (140), Expect = 1e-06
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +2
Query: 857 GKH*GFHVAHVGLVVFWA*RMNLFEVTHFIPEKPIF 964
GK G HVAH GL+VFWA MNLFEV HF+PEKP++
Sbjct: 8 GKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMY 43
>CAD30707.1 photosystem II protein, partial (chloroplast) [Actinidia deliciosa
var. deliciosa]
Length = 180
Score = 58.5 bits (140), Expect = 1e-06
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +2
Query: 857 GKH*GFHVAHVGLVVFWA*RMNLFEVTHFIPEKPIF 964
GK G HVAH GL+VFWA MNLFEV HF+PEKP++
Sbjct: 23 GKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMY 58
>KRH29413.1 hypothetical protein GLYMA_11G114700 [Glycine max]
Length = 135
Score = 57.4 bits (137), Expect = 1e-06
Identities = 24/36 (66%), Positives = 29/36 (80%)
Frame = +2
Query: 857 GKH*GFHVAHVGLVVFWA*RMNLFEVTHFIPEKPIF 964
GK G HVAH GL+VFWA MNLFE+ HF+PEKP++
Sbjct: 47 GKLLGAHVAHAGLIVFWAGAMNLFEMAHFVPEKPMY 82
>BAG11477.1 photosystem II CP43 apoprotein, partial [Lepidodinium chlorophorum]
Length = 352
Score = 60.5 bits (145), Expect = 2e-06
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +2
Query: 857 GKH*GFHVAHVGLVVFWA*RMNLFEVTHFIPEKPIF 964
GK G HVAH GL+VFWA MNLFEV+HFIPEKPI+
Sbjct: 6 GKLLGAHVAHAGLIVFWAGSMNLFEVSHFIPEKPIY 41
>CAD30706.1 photosystem II protein, partial (chloroplast) [Actinidia deliciosa
var. deliciosa]
Length = 191
Score = 58.5 bits (140), Expect = 2e-06
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +2
Query: 857 GKH*GFHVAHVGLVVFWA*RMNLFEVTHFIPEKPIF 964
GK G HVAH GL+VFWA MNLFEV HF+PEKP++
Sbjct: 23 GKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMY 58
>KYP72630.1 Photosystem II CP43 chlorophyll apoprotein, partial [Cajanus cajan]
Length = 193
Score = 58.5 bits (140), Expect = 2e-06
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +2
Query: 857 GKH*GFHVAHVGLVVFWA*RMNLFEVTHFIPEKPIF 964
GK G HVAH GL+VFWA MNLFEV HF+PEKP++
Sbjct: 47 GKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMY 82