BLASTX nr result

ID: Panax25_contig00000873 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00000873
         (534 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BAE46384.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small...    60   5e-08
AFO67218.1 putative ribulose-1,5-bisphosphate carboxylase/oxygen...    55   3e-06
CCJ09777.1 putative ribulose-1,5-bisphosphate carboxylase/oxygen...    52   4e-06
WP_077273880.1 hypothetical protein [Klebsiella pneumoniae]            52   5e-06

>BAE46384.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Panax ginseng]
          Length = 183

 Score = 60.1 bits (144), Expect = 5e-08
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = -3

Query: 532 YIRIIGFDNVRQVQCISFIAFKPPSAST 449
           YIRIIGFDNVRQVQCISFIAFKPPSAST
Sbjct: 156 YIRIIGFDNVRQVQCISFIAFKPPSAST 183


>AFO67218.1 putative ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit (plastid) [Aralia elata]
          Length = 183

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = -3

Query: 532 YIRIIGFDNVRQVQCISFIAFKPPSAST 449
           +IRIIGFDNVRQVQCISFIAFKPP  ST
Sbjct: 156 FIRIIGFDNVRQVQCISFIAFKPPQIST 183


>CCJ09777.1 putative ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit, partial [Hirudo medicinalis]
          Length = 47

 Score = 51.6 bits (122), Expect = 4e-06
 Identities = 22/24 (91%), Positives = 24/24 (100%)
 Frame = -3

Query: 532 YIRIIGFDNVRQVQCISFIAFKPP 461
           ++RIIGFDNVRQVQCISFIAFKPP
Sbjct: 21  FVRIIGFDNVRQVQCISFIAFKPP 44


>WP_077273880.1 hypothetical protein [Klebsiella pneumoniae]
          Length = 56

 Score = 51.6 bits (122), Expect = 5e-06
 Identities = 21/24 (87%), Positives = 24/24 (100%)
 Frame = -3

Query: 532 YIRIIGFDNVRQVQCISFIAFKPP 461
           Y+RIIGFDN+RQVQC+SFIAFKPP
Sbjct: 25  YVRIIGFDNMRQVQCVSFIAFKPP 48


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