BLASTX nr result
ID: Panax25_contig00000873
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax25_contig00000873 (534 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BAE46384.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small... 60 5e-08 AFO67218.1 putative ribulose-1,5-bisphosphate carboxylase/oxygen... 55 3e-06 CCJ09777.1 putative ribulose-1,5-bisphosphate carboxylase/oxygen... 52 4e-06 WP_077273880.1 hypothetical protein [Klebsiella pneumoniae] 52 5e-06 >BAE46384.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit [Panax ginseng] Length = 183 Score = 60.1 bits (144), Expect = 5e-08 Identities = 28/28 (100%), Positives = 28/28 (100%) Frame = -3 Query: 532 YIRIIGFDNVRQVQCISFIAFKPPSAST 449 YIRIIGFDNVRQVQCISFIAFKPPSAST Sbjct: 156 YIRIIGFDNVRQVQCISFIAFKPPSAST 183 >AFO67218.1 putative ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (plastid) [Aralia elata] Length = 183 Score = 55.1 bits (131), Expect = 3e-06 Identities = 25/28 (89%), Positives = 26/28 (92%) Frame = -3 Query: 532 YIRIIGFDNVRQVQCISFIAFKPPSAST 449 +IRIIGFDNVRQVQCISFIAFKPP ST Sbjct: 156 FIRIIGFDNVRQVQCISFIAFKPPQIST 183 >CCJ09777.1 putative ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial [Hirudo medicinalis] Length = 47 Score = 51.6 bits (122), Expect = 4e-06 Identities = 22/24 (91%), Positives = 24/24 (100%) Frame = -3 Query: 532 YIRIIGFDNVRQVQCISFIAFKPP 461 ++RIIGFDNVRQVQCISFIAFKPP Sbjct: 21 FVRIIGFDNVRQVQCISFIAFKPP 44 >WP_077273880.1 hypothetical protein [Klebsiella pneumoniae] Length = 56 Score = 51.6 bits (122), Expect = 5e-06 Identities = 21/24 (87%), Positives = 24/24 (100%) Frame = -3 Query: 532 YIRIIGFDNVRQVQCISFIAFKPP 461 Y+RIIGFDN+RQVQC+SFIAFKPP Sbjct: 25 YVRIIGFDNMRQVQCVSFIAFKPP 48