BLASTX nr result

ID: Panax25_contig00000718 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00000718
         (365 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_019165227.1 PREDICTED: E3 ubiquitin-protein ligase UPL3-like ...    54   9e-06

>XP_019165227.1 PREDICTED: E3 ubiquitin-protein ligase UPL3-like [Ipomoea nil]
          Length = 1890

 Score = 53.5 bits (127), Expect = 9e-06
 Identities = 44/102 (43%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
 Frame = -1

Query: 269 METRSRKRAEAXXXXXXXXXXXXXXXXXTKXXXXXXXXXXXSTVPTAT---AAPVNSSIS 99
           METRSRKRAEA                  K           ST  TAT   + P  S I+
Sbjct: 1   METRSRKRAEANSSAPSSSSGPTTRAA--KRARLSVSSTPTSTTATATNSASIPTRSRIA 58

Query: 98  TRSRASAM--------DESSGSAPRGRRGKN--QIPDKDNSD 3
           TRS+ S +        +ESSGSAPR RRGKN    PDKDNSD
Sbjct: 59  TRSQDSLLSSTPMDSTNESSGSAPRSRRGKNPSHAPDKDNSD 100


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