BLASTX nr result
ID: Panax25_contig00000379
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00000379
(469 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KZM95902.1 hypothetical protein DCAR_019144 [Daucus carota subsp... 65 5e-11
XP_017249909.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 62 9e-09
XP_015071616.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 62 1e-08
XP_017226575.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 60 4e-08
XP_004236644.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 60 6e-08
XP_006350243.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 59 9e-08
XP_019263003.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 59 1e-07
XP_019263002.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 59 1e-07
XP_016504117.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 59 1e-07
XP_009617770.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 59 1e-07
XP_016571963.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 57 4e-07
XP_009782113.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 57 6e-07
XP_019183982.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 55 2e-06
>KZM95902.1 hypothetical protein DCAR_019144 [Daucus carota subsp. sativus]
Length = 108
Score = 65.5 bits (158), Expect = 5e-11
Identities = 41/77 (53%), Positives = 48/77 (62%)
Frame = -1
Query: 232 GGKGYSQPKVGKSALKTPSFFLGKDNGSAKSKRGMNVQFESEDXXXXXXXXXXXXXXXKS 53
GGKG + KSALKTP F L +NGS KS++GMNVQFE ED +
Sbjct: 6 GGKGGA-----KSALKTPCFEL--NNGSTKSRKGMNVQFEFEDRGGKRDKAANGGK---N 55
Query: 52 PVKKPIPPLELRVEEEL 2
PVKKP PPL+LRVE+EL
Sbjct: 56 PVKKPTPPLQLRVEQEL 72
>XP_017249909.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4-like
isoform X1 [Daucus carota subsp. sativus]
Length = 195
Score = 61.6 bits (148), Expect = 9e-09
Identities = 40/78 (51%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = -1
Query: 232 GGKGYSQPKVGKSALKTP-SFFLGKDNGSAKSKRGMNVQFESEDXXXXXXXXXXXXXXXK 56
GGKG + KSALKTP S +NGS KS++GMNVQFE ED
Sbjct: 6 GGKGGA-----KSALKTPLSSGFELNNGSTKSRKGMNVQFEFEDRGGKRDKAANGGK--- 57
Query: 55 SPVKKPIPPLELRVEEEL 2
+PVKKP PPL+LRVE+EL
Sbjct: 58 NPVKKPTPPLQLRVEQEL 75
>XP_015071616.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4-like
[Solanum pennellii]
Length = 220
Score = 61.6 bits (148), Expect = 1e-08
Identities = 44/101 (43%), Positives = 51/101 (50%), Gaps = 20/101 (19%)
Frame = -1
Query: 244 MAEIGGKGYSQPKVGKSALKTPSFFLGKDNGSAKSKRGMNVQFESE-------------- 107
MAE GGKG+S PK GKSALK+P+ GKD+ SAKSKRG VQF+SE
Sbjct: 1 MAEKGGKGFSLPKSGKSALKSPA-SKGKDDSSAKSKRGRKVQFDSEGSLDTNSTKSNGKA 59
Query: 106 ------DXXXXXXXXXXXXXXXKSPVKKPIPPLELRVEEEL 2
KS K + PLELRVE+EL
Sbjct: 60 DIPSFKGDLGKAGKGEKAGSAGKSQKAKALDPLELRVEQEL 100
>XP_017226575.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4-like
[Daucus carota subsp. sativus]
Length = 215
Score = 60.1 bits (144), Expect = 4e-08
Identities = 40/98 (40%), Positives = 50/98 (51%), Gaps = 17/98 (17%)
Frame = -1
Query: 244 MAEIGGKGYSQPKVGKSALKTPSFFLGKDNGSAKSKRGMNVQFESE-------------- 107
M + GGKGYS PK KS+LKTP +NGSAKSK G+NVQFE++
Sbjct: 1 MGDKGGKGYSVPKPRKSSLKTPL----SNNGSAKSKHGVNVQFEADLNFSPRNGGKGESP 56
Query: 106 ---DXXXXXXXXXXXXXXXKSPVKKPIPPLELRVEEEL 2
D K P KK PP++LRVE++L
Sbjct: 57 MTNDLRGKGGKGDKVANGGKKPEKKTPPPVQLRVEKDL 94
>XP_004236644.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 [Solanum
lycopersicum]
Length = 220
Score = 59.7 bits (143), Expect = 6e-08
Identities = 31/46 (67%), Positives = 37/46 (80%)
Frame = -1
Query: 244 MAEIGGKGYSQPKVGKSALKTPSFFLGKDNGSAKSKRGMNVQFESE 107
MAE GGKG+S PK GKS+LK+P+ GKD+ SAKSKRG VQF+SE
Sbjct: 1 MAEKGGKGFSLPKSGKSSLKSPA-SKGKDDSSAKSKRGRKVQFDSE 45
>XP_006350243.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 [Solanum
tuberosum]
Length = 220
Score = 59.3 bits (142), Expect = 9e-08
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = -1
Query: 244 MAEIGGKGYSQPKVGKSALKTPSFFLGKDNGSAKSKRGMNVQFESE 107
MAE GGKG+S PK GKSALK+P+ GKD+ S KSKRG VQF+SE
Sbjct: 1 MAEKGGKGFSLPKSGKSALKSPA-SKGKDDSSVKSKRGRKVQFDSE 45
>XP_019263003.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4-like
isoform X2 [Nicotiana attenuata] OIT37437.1 dna-directed
rna polymerases iv and v subunit 4 [Nicotiana attenuata]
Length = 217
Score = 58.9 bits (141), Expect = 1e-07
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = -1
Query: 244 MAEIGGKGYSQPKVGKSALKTPSFFLGKDNGSAKSKRGMNVQFESE 107
M E GGKG+S PK GKSALK+P+ GKD+ SAKSKRG VQF+SE
Sbjct: 1 MTEKGGKGFSLPKNGKSALKSPA-SKGKDDSSAKSKRGRKVQFDSE 45
>XP_019263002.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4-like
isoform X1 [Nicotiana attenuata]
Length = 220
Score = 58.9 bits (141), Expect = 1e-07
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = -1
Query: 244 MAEIGGKGYSQPKVGKSALKTPSFFLGKDNGSAKSKRGMNVQFESE 107
M E GGKG+S PK GKSALK+P+ GKD+ SAKSKRG VQF+SE
Sbjct: 1 MTEKGGKGFSLPKNGKSALKSPA-SKGKDDSSAKSKRGRKVQFDSE 45
>XP_016504117.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4-like
[Nicotiana tabacum] XP_016504118.1 PREDICTED:
DNA-directed RNA polymerases IV and V subunit 4-like
[Nicotiana tabacum]
Length = 220
Score = 58.9 bits (141), Expect = 1e-07
Identities = 32/46 (69%), Positives = 37/46 (80%)
Frame = -1
Query: 244 MAEIGGKGYSQPKVGKSALKTPSFFLGKDNGSAKSKRGMNVQFESE 107
MAE GGKG+S PK GKSALK+P+ GKD+ SAKSKRG VQF+SE
Sbjct: 1 MAEKGGKGFSLPKNGKSALKSPA-SKGKDDISAKSKRGRKVQFDSE 45
>XP_009617770.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4
[Nicotiana tomentosiformis] XP_009617771.1 PREDICTED:
DNA-directed RNA polymerases IV and V subunit 4
[Nicotiana tomentosiformis]
Length = 220
Score = 58.9 bits (141), Expect = 1e-07
Identities = 32/46 (69%), Positives = 37/46 (80%)
Frame = -1
Query: 244 MAEIGGKGYSQPKVGKSALKTPSFFLGKDNGSAKSKRGMNVQFESE 107
MAE GGKG+S PK GKSALK+P+ GKD+ SAKSKRG VQF+SE
Sbjct: 1 MAEKGGKGFSLPKNGKSALKSPA-SKGKDDISAKSKRGRKVQFDSE 45
>XP_016571963.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4
[Capsicum annuum] XP_016571964.1 PREDICTED: DNA-directed
RNA polymerases IV and V subunit 4 [Capsicum annuum]
XP_016571965.1 PREDICTED: DNA-directed RNA polymerases
IV and V subunit 4 [Capsicum annuum] XP_016571966.1
PREDICTED: DNA-directed RNA polymerases IV and V subunit
4 [Capsicum annuum] XP_016571967.1 PREDICTED:
DNA-directed RNA polymerases IV and V subunit 4
[Capsicum annuum]
Length = 219
Score = 57.4 bits (137), Expect = 4e-07
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = -1
Query: 244 MAEIGGKGYSQPKVGKSALKTPSFFLGKDNGSAKSKRGMNVQFESE 107
MAE GGKG+ PK GKSALK+P+ GKD+ S KSKRG VQF+SE
Sbjct: 1 MAEKGGKGFILPKTGKSALKSPA-SKGKDDSSLKSKRGRKVQFDSE 45
>XP_009782113.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4
[Nicotiana sylvestris] XP_009782115.1 PREDICTED:
DNA-directed RNA polymerases IV and V subunit 4
[Nicotiana sylvestris] XP_016494867.1 PREDICTED:
DNA-directed RNA polymerases IV and V subunit 4-like
[Nicotiana tabacum]
Length = 220
Score = 57.0 bits (136), Expect = 6e-07
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = -1
Query: 244 MAEIGGKGYSQPKVGKSALKTPSFFLGKDNGSAKSKRGMNVQFESE 107
MAE GGKG+S PK GKSALK+P+ GKD+ SAKSKRG VQF+ E
Sbjct: 1 MAEKGGKGFSLPKNGKSALKSPA-SKGKDDISAKSKRGRKVQFDPE 45
>XP_019183982.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4-like
[Ipomoea nil] XP_019183983.1 PREDICTED: DNA-directed RNA
polymerases IV and V subunit 4-like [Ipomoea nil]
Length = 212
Score = 55.5 bits (132), Expect = 2e-06
Identities = 39/93 (41%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Frame = -1
Query: 244 MAEIGGKGYSQPKVGKSALKTPSFFLGKDNGSAKSKRGMNVQFESED------------X 101
M E GGKG SQP GKSALKT S GKD+ S K+K+G VQF+S+D
Sbjct: 1 MTEKGGKGKSQPNGGKSALKTSS-AKGKDDSSGKTKKGRKVQFDSDDSLDGSFMKSNGKA 59
Query: 100 XXXXXXXXXXXXXXKSPVKKPIPPLELRVEEEL 2
K K PLELRVE+E+
Sbjct: 60 DKPVGKGDKVGKSGKGQTAKAPTPLELRVEQEI 92