BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00000378
         (421 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_015071616.1 PREDICTED: DNA-directed RNA polymerases IV and V ...    64   1e-09
KZM95902.1 hypothetical protein DCAR_019144 [Daucus carota subsp...    61   2e-09
XP_004236644.1 PREDICTED: DNA-directed RNA polymerases IV and V ...    63   3e-09
XP_016504117.1 PREDICTED: DNA-directed RNA polymerases IV and V ...    62   4e-09
XP_009617770.1 PREDICTED: DNA-directed RNA polymerases IV and V ...    62   4e-09
XP_006350243.1 PREDICTED: DNA-directed RNA polymerases IV and V ...    62   4e-09
XP_019263003.1 PREDICTED: DNA-directed RNA polymerases IV and V ...    62   6e-09
XP_019263002.1 PREDICTED: DNA-directed RNA polymerases IV and V ...    62   6e-09
XP_016571963.1 PREDICTED: DNA-directed RNA polymerases IV and V ...    60   2e-08
XP_009782113.1 PREDICTED: DNA-directed RNA polymerases IV and V ...    60   2e-08
XP_017226575.1 PREDICTED: DNA-directed RNA polymerases IV and V ...    59   8e-08
XP_019183982.1 PREDICTED: DNA-directed RNA polymerases IV and V ...    58   2e-07
XP_017249909.1 PREDICTED: DNA-directed RNA polymerases IV and V ...    57   2e-07
EEF37360.1 conserved hypothetical protein [Ricinus communis]           53   9e-06

>XP_015071616.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4-like
           [Solanum pennellii]
          Length = 220

 Score = 63.9 bits (154), Expect = 1e-09
 Identities = 33/46 (71%), Positives = 38/46 (82%)
 Frame = -1

Query: 244 MAEKGGKGYSQPKVGKSALKTPSFFLGKDNDSAKSKRGMNVQFESE 107
           MAEKGGKG+S PK GKSALK+P+   GKD+ SAKSKRG  VQF+SE
Sbjct: 1   MAEKGGKGFSLPKSGKSALKSPA-SKGKDDSSAKSKRGRKVQFDSE 45


>KZM95902.1 hypothetical protein DCAR_019144 [Daucus carota subsp. sativus]
          Length = 108

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 40/77 (51%), Positives = 46/77 (59%)
 Frame = -1

Query: 232 GGKGYSQPKVGKSALKTPSFFLGKDNDSAKSKRGMNVQFESEDXXXXXXXXXXXXXXXKS 53
           GGKG +     KSALKTP F L  +N S KS++GMNVQFE ED                +
Sbjct: 6   GGKGGA-----KSALKTPCFEL--NNGSTKSRKGMNVQFEFEDRGGKRDKAANGGK---N 55

Query: 52  PVKKPIPPLGLRVEEEL 2
           PVKKP PPL LRVE+EL
Sbjct: 56  PVKKPTPPLQLRVEQEL 72


>XP_004236644.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 [Solanum
           lycopersicum]
          Length = 220

 Score = 62.8 bits (151), Expect = 3e-09
 Identities = 32/46 (69%), Positives = 38/46 (82%)
 Frame = -1

Query: 244 MAEKGGKGYSQPKVGKSALKTPSFFLGKDNDSAKSKRGMNVQFESE 107
           MAEKGGKG+S PK GKS+LK+P+   GKD+ SAKSKRG  VQF+SE
Sbjct: 1   MAEKGGKGFSLPKSGKSSLKSPA-SKGKDDSSAKSKRGRKVQFDSE 45


>XP_016504117.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4-like
           [Nicotiana tabacum] XP_016504118.1 PREDICTED:
           DNA-directed RNA polymerases IV and V subunit 4-like
           [Nicotiana tabacum]
          Length = 220

 Score = 62.4 bits (150), Expect = 4e-09
 Identities = 33/46 (71%), Positives = 38/46 (82%)
 Frame = -1

Query: 244 MAEKGGKGYSQPKVGKSALKTPSFFLGKDNDSAKSKRGMNVQFESE 107
           MAEKGGKG+S PK GKSALK+P+   GKD+ SAKSKRG  VQF+SE
Sbjct: 1   MAEKGGKGFSLPKNGKSALKSPA-SKGKDDISAKSKRGRKVQFDSE 45


>XP_009617770.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4
           [Nicotiana tomentosiformis] XP_009617771.1 PREDICTED:
           DNA-directed RNA polymerases IV and V subunit 4
           [Nicotiana tomentosiformis]
          Length = 220

 Score = 62.4 bits (150), Expect = 4e-09
 Identities = 33/46 (71%), Positives = 38/46 (82%)
 Frame = -1

Query: 244 MAEKGGKGYSQPKVGKSALKTPSFFLGKDNDSAKSKRGMNVQFESE 107
           MAEKGGKG+S PK GKSALK+P+   GKD+ SAKSKRG  VQF+SE
Sbjct: 1   MAEKGGKGFSLPKNGKSALKSPA-SKGKDDISAKSKRGRKVQFDSE 45


>XP_006350243.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 [Solanum
           tuberosum]
          Length = 220

 Score = 62.4 bits (150), Expect = 4e-09
 Identities = 32/46 (69%), Positives = 37/46 (80%)
 Frame = -1

Query: 244 MAEKGGKGYSQPKVGKSALKTPSFFLGKDNDSAKSKRGMNVQFESE 107
           MAEKGGKG+S PK GKSALK+P+   GKD+ S KSKRG  VQF+SE
Sbjct: 1   MAEKGGKGFSLPKSGKSALKSPA-SKGKDDSSVKSKRGRKVQFDSE 45


>XP_019263003.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4-like
           isoform X2 [Nicotiana attenuata] OIT37437.1 dna-directed
           rna polymerases iv and v subunit 4 [Nicotiana attenuata]
          Length = 217

 Score = 62.0 bits (149), Expect = 6e-09
 Identities = 32/46 (69%), Positives = 37/46 (80%)
 Frame = -1

Query: 244 MAEKGGKGYSQPKVGKSALKTPSFFLGKDNDSAKSKRGMNVQFESE 107
           M EKGGKG+S PK GKSALK+P+   GKD+ SAKSKRG  VQF+SE
Sbjct: 1   MTEKGGKGFSLPKNGKSALKSPA-SKGKDDSSAKSKRGRKVQFDSE 45


>XP_019263002.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4-like
           isoform X1 [Nicotiana attenuata]
          Length = 220

 Score = 62.0 bits (149), Expect = 6e-09
 Identities = 32/46 (69%), Positives = 37/46 (80%)
 Frame = -1

Query: 244 MAEKGGKGYSQPKVGKSALKTPSFFLGKDNDSAKSKRGMNVQFESE 107
           M EKGGKG+S PK GKSALK+P+   GKD+ SAKSKRG  VQF+SE
Sbjct: 1   MTEKGGKGFSLPKNGKSALKSPA-SKGKDDSSAKSKRGRKVQFDSE 45


>XP_016571963.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4
           [Capsicum annuum] XP_016571964.1 PREDICTED: DNA-directed
           RNA polymerases IV and V subunit 4 [Capsicum annuum]
           XP_016571965.1 PREDICTED: DNA-directed RNA polymerases
           IV and V subunit 4 [Capsicum annuum] XP_016571966.1
           PREDICTED: DNA-directed RNA polymerases IV and V subunit
           4 [Capsicum annuum] XP_016571967.1 PREDICTED:
           DNA-directed RNA polymerases IV and V subunit 4
           [Capsicum annuum]
          Length = 219

 Score = 60.5 bits (145), Expect = 2e-08
 Identities = 31/46 (67%), Positives = 36/46 (78%)
 Frame = -1

Query: 244 MAEKGGKGYSQPKVGKSALKTPSFFLGKDNDSAKSKRGMNVQFESE 107
           MAEKGGKG+  PK GKSALK+P+   GKD+ S KSKRG  VQF+SE
Sbjct: 1   MAEKGGKGFILPKTGKSALKSPA-SKGKDDSSLKSKRGRKVQFDSE 45


>XP_009782113.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4
           [Nicotiana sylvestris] XP_009782115.1 PREDICTED:
           DNA-directed RNA polymerases IV and V subunit 4
           [Nicotiana sylvestris] XP_016494867.1 PREDICTED:
           DNA-directed RNA polymerases IV and V subunit 4-like
           [Nicotiana tabacum]
          Length = 220

 Score = 60.5 bits (145), Expect = 2e-08
 Identities = 32/46 (69%), Positives = 37/46 (80%)
 Frame = -1

Query: 244 MAEKGGKGYSQPKVGKSALKTPSFFLGKDNDSAKSKRGMNVQFESE 107
           MAEKGGKG+S PK GKSALK+P+   GKD+ SAKSKRG  VQF+ E
Sbjct: 1   MAEKGGKGFSLPKNGKSALKSPA-SKGKDDISAKSKRGRKVQFDPE 45


>XP_017226575.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4-like
           [Daucus carota subsp. sativus]
          Length = 215

 Score = 58.9 bits (141), Expect = 8e-08
 Identities = 40/98 (40%), Positives = 49/98 (50%), Gaps = 17/98 (17%)
 Frame = -1

Query: 244 MAEKGGKGYSQPKVGKSALKTPSFFLGKDNDSAKSKRGMNVQFESE-------------- 107
           M +KGGKGYS PK  KS+LKTP      +N SAKSK G+NVQFE++              
Sbjct: 1   MGDKGGKGYSVPKPRKSSLKTPL----SNNGSAKSKHGVNVQFEADLNFSPRNGGKGESP 56

Query: 106 ---DXXXXXXXXXXXXXXXKSPVKKPIPPLGLRVEEEL 2
              D               K P KK  PP+ LRVE++L
Sbjct: 57  MTNDLRGKGGKGDKVANGGKKPEKKTPPPVQLRVEKDL 94


>XP_019183982.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4-like
           [Ipomoea nil] XP_019183983.1 PREDICTED: DNA-directed RNA
           polymerases IV and V subunit 4-like [Ipomoea nil]
          Length = 212

 Score = 57.8 bits (138), Expect = 2e-07
 Identities = 30/47 (63%), Positives = 35/47 (74%)
 Frame = -1

Query: 244 MAEKGGKGYSQPKVGKSALKTPSFFLGKDNDSAKSKRGMNVQFESED 104
           M EKGGKG SQP  GKSALKT S   GKD+ S K+K+G  VQF+S+D
Sbjct: 1   MTEKGGKGKSQPNGGKSALKTSS-AKGKDDSSGKTKKGRKVQFDSDD 46


>XP_017249909.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4-like
           isoform X1 [Daucus carota subsp. sativus]
          Length = 195

 Score = 57.4 bits (137), Expect = 2e-07
 Identities = 39/78 (50%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
 Frame = -1

Query: 232 GGKGYSQPKVGKSALKTP-SFFLGKDNDSAKSKRGMNVQFESEDXXXXXXXXXXXXXXXK 56
           GGKG +     KSALKTP S     +N S KS++GMNVQFE ED                
Sbjct: 6   GGKGGA-----KSALKTPLSSGFELNNGSTKSRKGMNVQFEFEDRGGKRDKAANGGK--- 57

Query: 55  SPVKKPIPPLGLRVEEEL 2
           +PVKKP PPL LRVE+EL
Sbjct: 58  NPVKKPTPPLQLRVEQEL 75


>EEF37360.1 conserved hypothetical protein [Ricinus communis]
          Length = 203

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 36/82 (43%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
 Frame = -1

Query: 238 EKGGKGYSQPKVG-KSALK--TPSFFLGKDNDSAKSKRGMNVQFESEDXXXXXXXXXXXX 68
           EKGGKG+S P  G KS+LK  TP+   GKD+ SAKSKRG  VQF S+             
Sbjct: 2   EKGGKGFSLPGKGLKSSLKSITPASTKGKDDTSAKSKRGKKVQFNSQGNMSKGGKGDKVS 61

Query: 67  XXXKSPVKKPIPPLGLRVEEEL 2
              K    K   PL L++E++L
Sbjct: 62  NGVKISSTKEPQPLELKIEQDL 83