BLASTX nr result

ID: Panax24_contig00041833 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00041833
         (623 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017246544.1 PREDICTED: uncharacterized protein LOC108218134 i...    62   6e-11
XP_017246545.1 PREDICTED: uncharacterized protein LOC108218134 i...    62   6e-11
KZM99364.1 hypothetical protein DCAR_013274 [Daucus carota subsp...    67   2e-09
XP_004305446.1 PREDICTED: probable transcription factor GLK1 [Fr...    57   3e-06

>XP_017246544.1 PREDICTED: uncharacterized protein LOC108218134 isoform X1 [Daucus
           carota subsp. sativus]
          Length = 442

 Score = 62.0 bits (149), Expect(2) = 6e-11
 Identities = 58/168 (34%), Positives = 81/168 (48%), Gaps = 7/168 (4%)
 Frame = +3

Query: 6   SRPTHFVKDKMWLAGDQMVGNHGRSSTNENDSKISWDIETNSSILSTHKNPKAMPSSYSK 185
           SR  H +KD + L        +G +S  E D K+S  I +   I S     KAMP     
Sbjct: 278 SRAPHLIKDNVRL------NRNGLASCVE-DQKLS-AIASTQMICS-----KAMPHYKPA 324

Query: 186 FISNNYEDKLETTYPLKLQPQGLKEKQMQHMSSTEAVFR---QDECLPNLQLSLS----Q 344
            +S   E +        L+ Q LKE+Q+QH +STE V +   +D+CLP+LQLSLS     
Sbjct: 325 LVSAGRETR-------SLEFQELKERQIQHRASTEVVSQKSVEDKCLPSLQLSLSPNIDN 377

Query: 345 DGETKNHHQEAKKDIIETKLSLSLSRQVSKYSSEDQQNGMSTVLHDVK 488
             E  +H  + +   I+T LSLSL   +S+  S       +   HDVK
Sbjct: 378 STEMTHHRIQDRGKAIDTMLSLSLLPGMSRNLSSKTNKEQTESKHDVK 425



 Score = 32.7 bits (73), Expect(2) = 6e-11
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +1

Query: 484 LKGWN*WIYKKIEARPSWG 540
           +KGW+  IYK+IE RP+WG
Sbjct: 424 VKGWDCSIYKQIETRPNWG 442


>XP_017246545.1 PREDICTED: uncharacterized protein LOC108218134 isoform X2 [Daucus
           carota subsp. sativus]
          Length = 441

 Score = 62.0 bits (149), Expect(2) = 6e-11
 Identities = 58/168 (34%), Positives = 81/168 (48%), Gaps = 7/168 (4%)
 Frame = +3

Query: 6   SRPTHFVKDKMWLAGDQMVGNHGRSSTNENDSKISWDIETNSSILSTHKNPKAMPSSYSK 185
           SR  H +KD + L        +G +S  E D K+S  I +   I S     KAMP     
Sbjct: 277 SRAPHLIKDNVRL------NRNGLASCVE-DQKLS-AIASTQMICS-----KAMPHYKPA 323

Query: 186 FISNNYEDKLETTYPLKLQPQGLKEKQMQHMSSTEAVFR---QDECLPNLQLSLS----Q 344
            +S   E +        L+ Q LKE+Q+QH +STE V +   +D+CLP+LQLSLS     
Sbjct: 324 LVSAGRETR-------SLEFQELKERQIQHRASTEVVSQKSVEDKCLPSLQLSLSPNIDN 376

Query: 345 DGETKNHHQEAKKDIIETKLSLSLSRQVSKYSSEDQQNGMSTVLHDVK 488
             E  +H  + +   I+T LSLSL   +S+  S       +   HDVK
Sbjct: 377 STEMTHHRIQDRGKAIDTMLSLSLLPGMSRNLSSKTNKEQTESKHDVK 424



 Score = 32.7 bits (73), Expect(2) = 6e-11
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +1

Query: 484 LKGWN*WIYKKIEARPSWG 540
           +KGW+  IYK+IE RP+WG
Sbjct: 423 VKGWDCSIYKQIETRPNWG 441


>KZM99364.1 hypothetical protein DCAR_013274 [Daucus carota subsp. sativus]
          Length = 403

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 61/189 (32%), Positives = 91/189 (48%), Gaps = 3/189 (1%)
 Frame = +3

Query: 6   SRPTHFVKDKMWLAGDQMVGNHGRSSTNENDSKISWDIETNSSILSTHKNPKAMPSSYSK 185
           SR  H +KD + L        +G +S  E D K+S  I +   I S     KAMP     
Sbjct: 258 SRAPHLIKDNVRL------NRNGLASCVE-DQKLS-AIASTQMICS-----KAMPHYKPA 304

Query: 186 FISNNYEDKLETTYPLKLQPQGLKEKQMQHMSSTEAVFR---QDECLPNLQLSLSQDGET 356
            +S   E +        L+ Q LKE+Q+QH +STE V +   +D+CLP+LQLSLS +   
Sbjct: 305 LVSAGRETR-------SLEFQELKERQIQHRASTEVVSQKSVEDKCLPSLQLSLSPN--- 354

Query: 357 KNHHQEAKKDIIETKLSLSLSRQVSKYSSEDQQNGMSTVLHDVKRLELMDLQENRSKAKL 536
                            +  S +++ +  +D+   + T+L        + L  +R+KAKL
Sbjct: 355 -----------------IDNSTEMTHHRIQDRGKAIDTMLS-------LSLLPDRNKAKL 390

Query: 537 GLSTWDLTM 563
           GLSTWD+TM
Sbjct: 391 GLSTWDITM 399


>XP_004305446.1 PREDICTED: probable transcription factor GLK1 [Fragaria vesca
           subsp. vesca]
          Length = 431

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 62/188 (32%), Positives = 89/188 (47%), Gaps = 19/188 (10%)
 Frame = +3

Query: 3   PSRPTHFVKDKMWLAGDQMVGNHGRSSTNENDSKISWDIETNSSILSTHKNPKAMPSSY- 179
           P RP+ F++DK W    +M+GNH +     +   ISW    + +   +  +P+A  + + 
Sbjct: 249 PIRPSRFLEDKRW-PPREMIGNHNKGM--RHSLNISWGNTIHVAQPKSVGSPQASSNQHL 305

Query: 180 --------SKFISNNYE---DKLETTYP-LKLQPQGLKEKQMQHMSSTEAVFRQDECLP- 320
                    KFIS+ YE   D LE   P   +  +  + +   +M +T    +Q + LP 
Sbjct: 306 PTNTTTCSPKFISSIYEPLSDPLEVRKPDESINGETYRAEVGDNMQAT----KQKKWLPL 361

Query: 321 NLQLSLSQD-----GETKNHHQEAKKDIIETKLSLSLSRQVSKYSSEDQQNGMSTVLHDV 485
           NLQLSL QD      E K+  QE+ KD IET LSLSLS      S   QQ+  ST    V
Sbjct: 362 NLQLSLRQDFSICSDEMKDGEQESMKD-IETTLSLSLSSS----SPRRQQDQSSTPTSRV 416

Query: 486 KRLELMDL 509
           + L    L
Sbjct: 417 RLLSSFPL 424


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