BLASTX nr result

ID: Panax24_contig00041738 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00041738
         (1406 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AQM32760.1 replicase [Agaricus bisporus virus 16]                      78   1e-11
JAT55818.1 Cyclin-T1-4 [Anthurium amnicola]                            73   4e-10

>AQM32760.1 replicase [Agaricus bisporus virus 16]
          Length = 611

 Score = 78.2 bits (191), Expect = 1e-11
 Identities = 68/264 (25%), Positives = 111/264 (42%), Gaps = 15/264 (5%)
 Frame = -3

Query: 1404 PVPFALDRKKLAKLKSDFPGVYFHCKDNGNHDHQFSHVVTMIGTR-LMQRRIK-----PG 1243
            PV + L  ++   +   FP    + +  G HDH  +H  T++  + L + ++      P 
Sbjct: 158  PVRYTLTSEQHKIIARRFPTWTVYTEAIGTHDHPIAHTTTVLAAKCLFEEKLPRDTRGPP 217

Query: 1242 SVVLDVYGNANACDRFNGTQANAANPKQMKALHFRCGPSDFIREVNKWGPFLDEAGDQRF 1063
              VLD+ G+  A ++  G + N       K +  R    D +R V KWGP     G   +
Sbjct: 218  LKVLDINGSP-AANQAQGQRLNLDITTTCKVITGR----DEMRRVKKWGPQAAPDGTPLW 272

Query: 1062 HR------GTLGDMTRSGELSRYNVLQFVHTLYYQDFTELTQALHSPCDAGTRVAYALIH 901
            H       G  G          Y  +  VH LYY    EL   L    D    V  A++H
Sbjct: 273  HDLYDREIGAEGASITPEMFREYKRITMVHCLYYYSPRELLALLRRGND--DLVLEAIVH 330

Query: 900  RHKGNR---GYINDGEQSYEKKTVFDGRKLVRQTNLATNSTYTHADLSDILFKQNKTWFP 730
            +  G+    G +N GEQ++++     G   ++Q N+ T  TY H D + +  K       
Sbjct: 331  KFGGSNATEGSLNGGEQTWKRVKHDGGHTTIQQPNIMTGQTYEHPDNAWLFEKSEYV--- 387

Query: 729  NEDAINGLTWECHLVNEETWVIEI 658
              +   GLTW+ ++  +ET+ I +
Sbjct: 388  --EGDLGLTWDINMFTDETFFISM 409


>JAT55818.1 Cyclin-T1-4 [Anthurium amnicola]
          Length = 511

 Score = 72.8 bits (177), Expect = 4e-10
 Identities = 95/387 (24%), Positives = 162/387 (41%), Gaps = 9/387 (2%)
 Frame = -3

Query: 1398 PFALDRK---KLAKLKSDFPGVYFHCKDNGNHDHQFSHVVTMIGTRLMQRRIKPGSVVLD 1228
            P+ALD++    L++L  D   + F+    G HDH  SH VT I   ++ R  K    V  
Sbjct: 68   PYALDKQGKEHLSELIGDTRTLTFNA--TGYHDHPLSHCVTEISEDMVVRTFKDQPFV-S 124

Query: 1227 VYGNANACDRFNGTQANAANPKQMKALHFRC-GPSDFIREVNKWGPFLDEAGDQRFHRGT 1051
            V+GN     R     A     + +    FR  G  + + +V+             F +G 
Sbjct: 125  VWGNQARHRRMGHVGAKTVTSRTVPHDWFRNRGYDEVVTDVDS------------FIKGR 172

Query: 1050 LGDMTRSGELSRYNVLQFVHTLYYQDFTELTQALHSPCDAGTRVAYALIHRHKGNRGYIN 871
             G M       +Y +    H LYY    E+   ++   DA     +A++HRH  + G++N
Sbjct: 173  -GHM-------QYRIFLATHALYYMTLEEVALWMNGNPDAEF---HAIVHRHNKSHGHLN 221

Query: 870  DGEQSYEKKTVFDGRKLVRQTNLATNSTYTHADLSDILFKQNKTWFPNEDAINGLTWECH 691
             GE  Y   T  DG  +V+QTN  T  +Y H  +  +    +   F       GLTW+ +
Sbjct: 222  KGEIKY--TTNSDG--IVKQTNPVTGFSYQHRSVEPLFHVDSCRLFSGS---VGLTWDIN 274

Query: 690  LVNEETWVIEIV---PYVLEELRDDIVDYDALWDADEDLETEMNGVETPPTPKSGIEFKD 520
             +  + + I+ V   P    +    +VD  AL   +++ E  + G +       G E   
Sbjct: 275  RLAGDAYHIKFVLCDPTACHK----VVDPYAL--IEKEREVIIRG-DVTTYRTLGFE--- 324

Query: 519  NYVIIPTSDGETVRAEIVNPKLFGVLRAACVGKDRTRATLDELVRLAKHNVNPSAMFGDK 340
             + +   +DG  V  ++   +L+  LR    GK R+    D+L+ + +   N + +    
Sbjct: 325  -WYVYHHNDGLHVLEDV---ELYDRLRRLIAGKVRSEKAKDDLMAMCRRLANKNDIISIH 380

Query: 339  EGM--HCPEDKIFDHALAAYFVDLDHE 265
            +G     P +K+  +  AA+  D+  E
Sbjct: 381  QGFVHEVPPEKMSLYVEAAFHADVQAE 407


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