BLASTX nr result

ID: Panax24_contig00041445 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00041445
         (610 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJU81224.1 hypothetical protein N619_00235, partial [Pseudomonas...    60   1e-08
KZN01270.1 hypothetical protein DCAR_010024 [Daucus carota subsp...    59   2e-07

>KJU81224.1 hypothetical protein N619_00235, partial [Pseudomonas
           pseudoalcaligenes]
          Length = 86

 Score = 60.1 bits (144), Expect = 1e-08
 Identities = 28/71 (39%), Positives = 39/71 (54%)
 Frame = +3

Query: 252 QEQHLEECCRQMRSIDKSCRCMAIREXXXXXXXXXXXXXXXXXXXXXXXXSLPSKCNIEM 431
           Q+QH  +CC+Q+ +IDK CRC +IR+                        +LP  CN+E 
Sbjct: 17  QQQHRRQCCQQLENIDKQCRCESIRQMMRQQQQERQMGGQEMEKMTQMAMNLPRMCNME- 75

Query: 432 PQQCQIRAVYF 464
           PQQCQ+RAV+F
Sbjct: 76  PQQCQMRAVFF 86


>KZN01270.1 hypothetical protein DCAR_010024 [Daucus carota subsp. sativus]
          Length = 152

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 32/88 (36%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
 Frame = +3

Query: 210 HCMMYLSP--RSSMNAQEQHLEECCRQMRSIDKSCRCMAIRE------XXXXXXXXXXXX 365
           HC MYL+P   SS NAQ  HL ECC Q+  ++  CRCMAI+E                  
Sbjct: 55  HCKMYLTPDPSSSKNAQTTHLTECCGQLDELETKCRCMAIKEVLWNLKNQKSMSGKTLWE 114

Query: 366 XXXXXXXXXXXXSLPSKCNIEMPQQCQI 449
                        LP+KCN+E+ + C I
Sbjct: 115 SEELEQMEQDAEDLPTKCNVELKEPCII 142


Top