BLASTX nr result

ID: Panax24_contig00041155 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00041155
         (454 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZM97763.1 hypothetical protein DCAR_014875 [Daucus carota subsp...    69   1e-10
XP_017245168.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 52...    69   1e-10
XP_002285108.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 52...    62   2e-08
CAN63495.1 hypothetical protein VITISV_011670 [Vitis vinifera]         62   3e-08

>KZM97763.1 hypothetical protein DCAR_014875 [Daucus carota subsp. sativus]
          Length = 601

 Score = 68.6 bits (166), Expect = 1e-10
 Identities = 40/86 (46%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
 Frame = -1

Query: 454 ANRYGGSKFGGHDFRXXXXXXXXXXXXXXSYTGQVAFNEPYIDGSGSTYSDPVG-TGFAA 278
           A R GGSKFGGHDFR               YT QVAF EP I  SG   S   G   +  
Sbjct: 516 AYRPGGSKFGGHDFRKATNMSGGNHYYSSGYTNQVAFGEPCIAPSGPFNSFYSGEPAYPV 575

Query: 277 ASVNSYSDGAHVYGFDHGSVVATGWD 200
           ASV+SY+ GA+ Y ++HGS+VA  W+
Sbjct: 576 ASVDSYAAGAYGYPYNHGSLVAGTWN 601


>XP_017245168.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 52C-like [Daucus
           carota subsp. sativus]
          Length = 625

 Score = 68.6 bits (166), Expect = 1e-10
 Identities = 40/86 (46%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
 Frame = -1

Query: 454 ANRYGGSKFGGHDFRXXXXXXXXXXXXXXSYTGQVAFNEPYIDGSGSTYSDPVG-TGFAA 278
           A R GGSKFGGHDFR               YT QVAF EP I  SG   S   G   +  
Sbjct: 540 AYRPGGSKFGGHDFRKATNMSGGNHYYSSGYTNQVAFGEPCIAPSGPFNSFYSGEPAYPV 599

Query: 277 ASVNSYSDGAHVYGFDHGSVVATGWD 200
           ASV+SY+ GA+ Y ++HGS+VA  W+
Sbjct: 600 ASVDSYAAGAYGYPYNHGSLVAGTWN 625


>XP_002285108.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 52C [Vitis vinifera]
          Length = 615

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 37/87 (42%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
 Frame = -1

Query: 451 NRYGGSKFGGHDFRXXXXXXXXXXXXXXSYTGQVAFNEPYI---DGSGSTYSDPVGTGFA 281
           +RYGG +FGGHDFR               Y G V   + ++    G G  YS P G    
Sbjct: 534 SRYGGGRFGGHDFRSSSQLKREDYYSPSPY-GDVTQTDVFVAPASGEGY-YSIPYGE--- 588

Query: 280 AASVNSYSDGAHVYGFDHGSVVATGWD 200
           AA  +SY+ G+  YGFDHGS+VA+GWD
Sbjct: 589 AAPPDSYAAGSDRYGFDHGSIVASGWD 615


>CAN63495.1 hypothetical protein VITISV_011670 [Vitis vinifera]
          Length = 757

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 35/86 (40%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
 Frame = -1

Query: 451 NRYGGSKFGGHDFRXXXXXXXXXXXXXXSYTGQVAFNEPYIDGSGST--YSDPVGTGFAA 278
           +RYGG +FGGHDFR               Y G V   + ++  +     YS P G    A
Sbjct: 676 SRYGGGRFGGHDFRSSSQLKREDYYSPSPY-GDVTQTDVFVAPASDEGYYSIPYGE---A 731

Query: 277 ASVNSYSDGAHVYGFDHGSVVATGWD 200
           A  +SY+ G+  YGFDHGS+VA+GWD
Sbjct: 732 APPDSYAAGSDRYGFDHGSIVASGWD 757


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