BLASTX nr result

ID: Panax24_contig00040830 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00040830
         (457 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017216054.1 PREDICTED: pentatricopeptide repeat-containing pr...    58   7e-07

>XP_017216054.1 PREDICTED: pentatricopeptide repeat-containing protein At4g28010
           [Daucus carota subsp. sativus]
          Length = 727

 Score = 57.8 bits (138), Expect = 7e-07
 Identities = 35/82 (42%), Positives = 45/82 (54%)
 Frame = +2

Query: 206 IVKTYLNSHFHLFISSQRRHHAFMKLFXXXXXXXXXXIFKPTDDLHKVDTQLRGLCEKSN 385
           ++K  LN  FHLFI S R      KLF               D++ +VD +LRG CE   
Sbjct: 1   MIKHCLNPQFHLFIPSLRLVSPLEKLFSTNVDYNVAD-----DNIGRVDFKLRGFCE--G 53

Query: 386 SQLIDAVSLFYHVVDSGLTPSG 451
           S+L+DA S F+HVV+ GL PSG
Sbjct: 54  SRLVDAFSFFHHVVELGLVPSG 75


Top