BLASTX nr result

ID: Panax24_contig00040811 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00040811
         (404 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZN12082.1 hypothetical protein DCAR_004738 [Daucus carota subsp...    34   6e-07
KZN12081.1 hypothetical protein DCAR_004737 [Daucus carota subsp...    34   2e-06
XP_017230718.1 PREDICTED: membrane protein of ER body-like prote...    34   2e-06
XP_017230719.1 PREDICTED: membrane protein of ER body-like prote...    34   2e-06

>KZN12082.1 hypothetical protein DCAR_004738 [Daucus carota subsp. sativus]
          Length = 601

 Score = 34.3 bits (77), Expect(3) = 6e-07
 Identities = 15/21 (71%), Positives = 16/21 (76%)
 Frame = +3

Query: 105 QHESVDLFGCSSCYSLFVPSG 167
           Q E VDL GC SC S+FVPSG
Sbjct: 195 QPEPVDLLGCLSCCSVFVPSG 215



 Score = 33.1 bits (74), Expect(3) = 6e-07
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = +1

Query: 22  TMYCPNCNTSITKVVLHE 75
           TM+CPNCN  ITKVVL +
Sbjct: 165 TMHCPNCNAVITKVVLRK 182



 Score = 32.3 bits (72), Expect(3) = 6e-07
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +2

Query: 251 TANCFSWFWLLGNAEKKDGQLPPDANGPAHSLTRDNNNIVIEQ 379
           + NCFSW  LL N  +   ++P   N  A   T ++ ++VI++
Sbjct: 214 SGNCFSWIRLLENGGEDSEEIPQQTNLLASGFTGNDGDMVIDK 256


>KZN12081.1 hypothetical protein DCAR_004737 [Daucus carota subsp. sativus]
          Length = 671

 Score = 34.3 bits (77), Expect(3) = 2e-06
 Identities = 15/21 (71%), Positives = 16/21 (76%)
 Frame = +3

Query: 105 QHESVDLFGCSSCYSLFVPSG 167
           Q E VDL GC SC S+FVPSG
Sbjct: 231 QPEPVDLLGCLSCCSVFVPSG 251



 Score = 33.1 bits (74), Expect(3) = 2e-06
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = +1

Query: 22  TMYCPNCNTSITKVVLHE 75
           TM+CPNCN  ITKVVL +
Sbjct: 201 TMHCPNCNAVITKVVLRK 218



 Score = 30.8 bits (68), Expect(3) = 2e-06
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +2

Query: 251 TANCFSWFWLLGNAEKKDGQLPPDANGPAHSLTRDNNNIVIEQ 379
           + NCFSW  LL N   +D ++P   N      T ++ N+VI++
Sbjct: 250 SGNCFSWIRLLANG-GEDSEVPQQTNILQSGSTGNDGNMVIDK 291


>XP_017230718.1 PREDICTED: membrane protein of ER body-like protein isoform X1
           [Daucus carota subsp. sativus]
          Length = 645

 Score = 34.3 bits (77), Expect(3) = 2e-06
 Identities = 15/21 (71%), Positives = 16/21 (76%)
 Frame = +3

Query: 105 QHESVDLFGCSSCYSLFVPSG 167
           Q E VDL GC SC S+FVPSG
Sbjct: 205 QPEPVDLLGCLSCCSVFVPSG 225



 Score = 33.1 bits (74), Expect(3) = 2e-06
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = +1

Query: 22  TMYCPNCNTSITKVVLHE 75
           TM+CPNCN  ITKVVL +
Sbjct: 175 TMHCPNCNAVITKVVLRK 192



 Score = 30.8 bits (68), Expect(3) = 2e-06
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +2

Query: 251 TANCFSWFWLLGNAEKKDGQLPPDANGPAHSLTRDNNNIVIEQ 379
           + NCFSW  LL N   +D ++P   N      T ++ N+VI++
Sbjct: 224 SGNCFSWIRLLANG-GEDSEVPQQTNILQSGSTGNDGNMVIDK 265


>XP_017230719.1 PREDICTED: membrane protein of ER body-like protein isoform X2
           [Daucus carota subsp. sativus]
          Length = 575

 Score = 34.3 bits (77), Expect(3) = 2e-06
 Identities = 15/21 (71%), Positives = 16/21 (76%)
 Frame = +3

Query: 105 QHESVDLFGCSSCYSLFVPSG 167
           Q E VDL GC SC S+FVPSG
Sbjct: 135 QPEPVDLLGCLSCCSVFVPSG 155



 Score = 33.1 bits (74), Expect(3) = 2e-06
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = +1

Query: 22  TMYCPNCNTSITKVVLHE 75
           TM+CPNCN  ITKVVL +
Sbjct: 105 TMHCPNCNAVITKVVLRK 122



 Score = 30.8 bits (68), Expect(3) = 2e-06
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +2

Query: 251 TANCFSWFWLLGNAEKKDGQLPPDANGPAHSLTRDNNNIVIEQ 379
           + NCFSW  LL N   +D ++P   N      T ++ N+VI++
Sbjct: 154 SGNCFSWIRLLANG-GEDSEVPQQTNILQSGSTGNDGNMVIDK 195


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