BLASTX nr result
ID: Panax24_contig00040811
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax24_contig00040811 (404 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value KZN12082.1 hypothetical protein DCAR_004738 [Daucus carota subsp... 34 6e-07 KZN12081.1 hypothetical protein DCAR_004737 [Daucus carota subsp... 34 2e-06 XP_017230718.1 PREDICTED: membrane protein of ER body-like prote... 34 2e-06 XP_017230719.1 PREDICTED: membrane protein of ER body-like prote... 34 2e-06 >KZN12082.1 hypothetical protein DCAR_004738 [Daucus carota subsp. sativus] Length = 601 Score = 34.3 bits (77), Expect(3) = 6e-07 Identities = 15/21 (71%), Positives = 16/21 (76%) Frame = +3 Query: 105 QHESVDLFGCSSCYSLFVPSG 167 Q E VDL GC SC S+FVPSG Sbjct: 195 QPEPVDLLGCLSCCSVFVPSG 215 Score = 33.1 bits (74), Expect(3) = 6e-07 Identities = 13/18 (72%), Positives = 15/18 (83%) Frame = +1 Query: 22 TMYCPNCNTSITKVVLHE 75 TM+CPNCN ITKVVL + Sbjct: 165 TMHCPNCNAVITKVVLRK 182 Score = 32.3 bits (72), Expect(3) = 6e-07 Identities = 14/43 (32%), Positives = 24/43 (55%) Frame = +2 Query: 251 TANCFSWFWLLGNAEKKDGQLPPDANGPAHSLTRDNNNIVIEQ 379 + NCFSW LL N + ++P N A T ++ ++VI++ Sbjct: 214 SGNCFSWIRLLENGGEDSEEIPQQTNLLASGFTGNDGDMVIDK 256 >KZN12081.1 hypothetical protein DCAR_004737 [Daucus carota subsp. sativus] Length = 671 Score = 34.3 bits (77), Expect(3) = 2e-06 Identities = 15/21 (71%), Positives = 16/21 (76%) Frame = +3 Query: 105 QHESVDLFGCSSCYSLFVPSG 167 Q E VDL GC SC S+FVPSG Sbjct: 231 QPEPVDLLGCLSCCSVFVPSG 251 Score = 33.1 bits (74), Expect(3) = 2e-06 Identities = 13/18 (72%), Positives = 15/18 (83%) Frame = +1 Query: 22 TMYCPNCNTSITKVVLHE 75 TM+CPNCN ITKVVL + Sbjct: 201 TMHCPNCNAVITKVVLRK 218 Score = 30.8 bits (68), Expect(3) = 2e-06 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = +2 Query: 251 TANCFSWFWLLGNAEKKDGQLPPDANGPAHSLTRDNNNIVIEQ 379 + NCFSW LL N +D ++P N T ++ N+VI++ Sbjct: 250 SGNCFSWIRLLANG-GEDSEVPQQTNILQSGSTGNDGNMVIDK 291 >XP_017230718.1 PREDICTED: membrane protein of ER body-like protein isoform X1 [Daucus carota subsp. sativus] Length = 645 Score = 34.3 bits (77), Expect(3) = 2e-06 Identities = 15/21 (71%), Positives = 16/21 (76%) Frame = +3 Query: 105 QHESVDLFGCSSCYSLFVPSG 167 Q E VDL GC SC S+FVPSG Sbjct: 205 QPEPVDLLGCLSCCSVFVPSG 225 Score = 33.1 bits (74), Expect(3) = 2e-06 Identities = 13/18 (72%), Positives = 15/18 (83%) Frame = +1 Query: 22 TMYCPNCNTSITKVVLHE 75 TM+CPNCN ITKVVL + Sbjct: 175 TMHCPNCNAVITKVVLRK 192 Score = 30.8 bits (68), Expect(3) = 2e-06 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = +2 Query: 251 TANCFSWFWLLGNAEKKDGQLPPDANGPAHSLTRDNNNIVIEQ 379 + NCFSW LL N +D ++P N T ++ N+VI++ Sbjct: 224 SGNCFSWIRLLANG-GEDSEVPQQTNILQSGSTGNDGNMVIDK 265 >XP_017230719.1 PREDICTED: membrane protein of ER body-like protein isoform X2 [Daucus carota subsp. sativus] Length = 575 Score = 34.3 bits (77), Expect(3) = 2e-06 Identities = 15/21 (71%), Positives = 16/21 (76%) Frame = +3 Query: 105 QHESVDLFGCSSCYSLFVPSG 167 Q E VDL GC SC S+FVPSG Sbjct: 135 QPEPVDLLGCLSCCSVFVPSG 155 Score = 33.1 bits (74), Expect(3) = 2e-06 Identities = 13/18 (72%), Positives = 15/18 (83%) Frame = +1 Query: 22 TMYCPNCNTSITKVVLHE 75 TM+CPNCN ITKVVL + Sbjct: 105 TMHCPNCNAVITKVVLRK 122 Score = 30.8 bits (68), Expect(3) = 2e-06 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = +2 Query: 251 TANCFSWFWLLGNAEKKDGQLPPDANGPAHSLTRDNNNIVIEQ 379 + NCFSW LL N +D ++P N T ++ N+VI++ Sbjct: 154 SGNCFSWIRLLANG-GEDSEVPQQTNILQSGSTGNDGNMVIDK 195