BLASTX nr result

ID: Panax24_contig00040616 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00040616
         (515 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017246292.1 PREDICTED: uncharacterized protein LOC108217899 i...    60   3e-09
XP_017246293.1 PREDICTED: uncharacterized protein LOC108217899 i...    60   3e-09

>XP_017246292.1 PREDICTED: uncharacterized protein LOC108217899 isoform X1 [Daucus
           carota subsp. sativus]
          Length = 217

 Score = 60.5 bits (145), Expect(2) = 3e-09
 Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
 Frame = +2

Query: 179 MSMTRSVISSNFTSLNIKFSRRFRTFFFNPISHLPIQKYRNGSLFEGSRSLQYFRANRMA 358
           MS+ RS++    +  +I    R+R   FNPI    ++ + N SL+  +RSL++       
Sbjct: 1   MSIARSIVCG-ISCTSITPLPRYRALVFNPIFETRVRGHGNKSLYSANRSLRF----STW 55

Query: 359 QNNSKTKRNLVVYCNLPPGTP-----LPFGALPDSWKDW 460
           Q+ SK KRN  VY ++PP  P     LP G LP SWK+W
Sbjct: 56  QHESKIKRNFAVYSSIPPEVPVSSGGLP-GGLPGSWKNW 93



 Score = 28.1 bits (61), Expect(2) = 3e-09
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +1

Query: 463 IGNAVTVAVSLLTNKWG 513
           +G  VTV + LLTNKWG
Sbjct: 95  LGMVVTVLIPLLTNKWG 111


>XP_017246293.1 PREDICTED: uncharacterized protein LOC108217899 isoform X2 [Daucus
           carota subsp. sativus] KZM99759.1 hypothetical protein
           DCAR_012879 [Daucus carota subsp. sativus]
          Length = 213

 Score = 60.5 bits (145), Expect(2) = 3e-09
 Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
 Frame = +2

Query: 179 MSMTRSVISSNFTSLNIKFSRRFRTFFFNPISHLPIQKYRNGSLFEGSRSLQYFRANRMA 358
           MS+ RS++    +  +I    R+R   FNPI    ++ + N SL+  +RSL++       
Sbjct: 1   MSIARSIVCG-ISCTSITPLPRYRALVFNPIFETRVRGHGNKSLYSANRSLRF----STW 55

Query: 359 QNNSKTKRNLVVYCNLPPGTP-----LPFGALPDSWKDW 460
           Q+ SK KRN  VY ++PP  P     LP G LP SWK+W
Sbjct: 56  QHESKIKRNFAVYSSIPPEVPVSSGGLP-GGLPGSWKNW 93



 Score = 28.1 bits (61), Expect(2) = 3e-09
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +1

Query: 463 IGNAVTVAVSLLTNKWG 513
           +G  VTV + LLTNKWG
Sbjct: 95  LGMVVTVLIPLLTNKWG 111


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