BLASTX nr result

ID: Panax24_contig00040555 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00040555
         (469 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_018853845.1 PREDICTED: uncharacterized protein LOC109015849, ...    60   8e-08
XP_018810787.1 PREDICTED: uncharacterized protein LOC108983564 [...    55   4e-06
XP_018833704.1 PREDICTED: uncharacterized protein LOC109001043 [...    55   5e-06
AAL78659.1 reverse transcriptase, partial [Fagus sylvatica]            54   6e-06
XP_018810790.1 PREDICTED: uncharacterized protein LOC108983567 [...    55   6e-06

>XP_018853845.1 PREDICTED: uncharacterized protein LOC109015849, partial [Juglans
           regia]
          Length = 434

 Score = 60.5 bits (145), Expect = 8e-08
 Identities = 28/59 (47%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
 Frame = -2

Query: 417 IVSRT*NAIVSGRNILDATLVVNMCVEDNLRDGTPGGICKLDTGR-YDLDN*DFLIYQL 244
           I+S++ NA V GR I+D+ L+ N CV+  +R+G PG +CKLD  + YD  N +FL+Y L
Sbjct: 4   IISKSQNAFVKGRQIIDSVLIANECVDSRMREGAPGVLCKLDMEKAYDHVNWNFLLYML 62


>XP_018810787.1 PREDICTED: uncharacterized protein LOC108983564 [Juglans regia]
          Length = 220

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
 Frame = -2

Query: 399 NAIVSGRNILDATLVVNMCVEDNLRDGTPGGICKLDTGR-YDLDN*DFLIYQLE 241
           NA V GR ILD+ L+ N C++  L+ GTP  ICKLD  + YD  N +FL+Y L+
Sbjct: 131 NAFVRGRQILDSVLIANECLDSRLKSGTPSIICKLDIEKAYDHVNWEFLLYLLK 184


>XP_018833704.1 PREDICTED: uncharacterized protein LOC109001043 [Juglans regia]
          Length = 674

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
 Frame = -2

Query: 456 KGISIHLRRVEALIVSRT*NAIVSGRNILDATLVVNMCVEDNLRDGTPGGICKLDTGR-Y 280
           K ++  L  V   I+S++ +A V GR ILD+ L+ N C+E  +R+ T G +CKLD  + +
Sbjct: 23  KILAKRLSEVMGKIISKSQSAFVKGRQILDSVLIANECLESRVRNSTQGLLCKLDMKKAF 82

Query: 279 DLDN*DFLIYQL 244
           D  N DFL+Y L
Sbjct: 83  DHVNWDFLLYIL 94


>AAL78659.1 reverse transcriptase, partial [Fagus sylvatica]
          Length = 168

 Score = 53.5 bits (127), Expect = 6e-06
 Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
 Frame = -2

Query: 456 KGISIHLRRVEALIVSRT*NAIVSGRNILDATLVVNMCVEDNLRDGTPGGICKLDTGR-Y 280
           K ++  L+ V   ++S + N+ V GR ILD+ L+ N C++  ++ G PG ICKLD  + Y
Sbjct: 16  KVLANRLKLVLDSVISESQNSFVGGRQILDSVLIANECLDSRIKSGIPGLICKLDIEKAY 75

Query: 279 DLDN*DFLIYQLEEI 235
           D  N D L + L+ +
Sbjct: 76  DHVNWDCLFFILDRM 90


>XP_018810790.1 PREDICTED: uncharacterized protein LOC108983567 [Juglans regia]
          Length = 645

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
 Frame = -2

Query: 417 IVSRT*NAIVSGRNILDATLVVNMCVEDNLRDGTPGGICKLDTGR-YDLDN*DFLIYQLE 241
           I+S+  NA + GR ILD+ L+ N C++  LR+G+PG + KLD  + YD  N DFL+Y L+
Sbjct: 450 IISKPQNAFIHGRYILDSVLIANECLDARLREGSPGILYKLDMEKTYDHVNWDFLLYLLK 509


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