BLASTX nr result
ID: Panax24_contig00040423
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00040423
(392 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KZV22739.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [D... 166 2e-49
KZV42060.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [D... 166 3e-49
KYP50279.1 Retrovirus-related Pol polyprotein from transposon TN... 163 1e-48
KYP44906.1 Retrovirus-related Pol polyprotein from transposon TN... 161 3e-48
KYP66580.1 Retrovirus-related Pol polyprotein from transposon TN... 164 8e-47
KYP57482.1 Retrovirus-related Pol polyprotein from transposon TN... 162 3e-46
KZV22085.1 retrovirus-related Pol polyprotein from transposon TN... 163 3e-45
KZV40714.1 retrovirus-related Pol polyprotein from transposon TN... 162 4e-45
BAT89814.1 hypothetical protein VIGAN_06088500, partial [Vigna a... 152 2e-44
AAF25964.2 F6N18.1 [Arabidopsis thaliana] 163 3e-44
AAG51247.1 copia-type polyprotein, putative; 28768-32772 [Arabid... 163 3e-44
BAB11200.1 copia-type polyprotein [Arabidopsis thaliana] CAC3762... 163 3e-44
JAU12536.1 Retrovirus-related Pol polyprotein from transposon TN... 159 6e-44
KYP77347.1 Retrovirus-related Pol polyprotein from transposon TN... 151 4e-43
CAN74984.1 hypothetical protein VITISV_035210 [Vitis vinifera] 160 4e-43
KYP40818.1 Retrovirus-related Pol polyprotein from transposon TN... 155 8e-43
XP_013632421.1 PREDICTED: uncharacterized mitochondrial protein ... 152 2e-42
KYP40643.1 Retrovirus-related Pol polyprotein from transposon TN... 152 2e-42
JAU33129.1 Retrovirus-related Pol polyprotein from transposon TN... 157 3e-42
KYP33371.1 Retrovirus-related Pol polyprotein from transposon TN... 145 6e-42
>KZV22739.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Dorcoceras
hygrometricum]
Length = 225
Score = 166 bits (420), Expect = 2e-49
Identities = 77/127 (60%), Positives = 99/127 (77%)
Frame = +2
Query: 2 RGGSNELLAYTDSDYAGDSEDSKSTSGYVFTMGDGVVAWSSKKQPIVTLLTTXXXXXXXX 181
RG ++L+AYTDSDYAGD +DSKSTSGY F M G VAWSS+KQPIVTL TT
Sbjct: 56 RGTMSDLVAYTDSDYAGDRDDSKSTSGYAFMMSGGAVAWSSRKQPIVTLSTTEAEYVAAV 115
Query: 182 XXXXXXLWMRRVLEELGWQQSEGIILMCDNTSTIKLSRNPVLHGRSKYIRVRFHFLRDLT 361
+WMRR+L+E+G +Q+E +++ CDNTSTIKLS+N V+HGRSK+IRVR+HFLRDLT
Sbjct: 116 ACACQAIWMRRILKEIGHEQTEEMVVFCDNTSTIKLSKNAVMHGRSKHIRVRYHFLRDLT 175
Query: 362 KEGAVEM 382
K+G +++
Sbjct: 176 KQGIIKL 182
>KZV42060.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Dorcoceras
hygrometricum]
Length = 225
Score = 166 bits (419), Expect = 3e-49
Identities = 77/127 (60%), Positives = 99/127 (77%)
Frame = +2
Query: 2 RGGSNELLAYTDSDYAGDSEDSKSTSGYVFTMGDGVVAWSSKKQPIVTLLTTXXXXXXXX 181
RG ++L+AYTDSDYAGD +DSKSTSGY F M G VAWSS+KQPIVTL TT
Sbjct: 56 RGTMSDLVAYTDSDYAGDIDDSKSTSGYAFMMSGGAVAWSSRKQPIVTLSTTEAEYVAAV 115
Query: 182 XXXXXXLWMRRVLEELGWQQSEGIILMCDNTSTIKLSRNPVLHGRSKYIRVRFHFLRDLT 361
+WMRR+L+E+G +Q+E +++ CDNTSTIKLS+N V+HGRSK+IRVR+HFLRDLT
Sbjct: 116 ACACQAIWMRRILKEIGHEQTEEMVVFCDNTSTIKLSKNAVMHGRSKHIRVRYHFLRDLT 175
Query: 362 KEGAVEM 382
K+G +++
Sbjct: 176 KQGIIKL 182
>KYP50279.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 195
Score = 163 bits (412), Expect = 1e-48
Identities = 78/127 (61%), Positives = 95/127 (74%)
Frame = +2
Query: 2 RGGSNELLAYTDSDYAGDSEDSKSTSGYVFTMGDGVVAWSSKKQPIVTLLTTXXXXXXXX 181
+GG ELLAYTDSDYA D ED KSTSGYVF + +G VAWSSKKQPIVTL TT
Sbjct: 31 KGGDEELLAYTDSDYASDLEDRKSTSGYVFLLSNGAVAWSSKKQPIVTLSTTEAEFVAAA 90
Query: 182 XXXXXXLWMRRVLEELGWQQSEGIILMCDNTSTIKLSRNPVLHGRSKYIRVRFHFLRDLT 361
+WMRR+L+ELG Q LMCDN+STIKLS+NP++HGRSK+I VRFHFLR+L+
Sbjct: 91 ACACQVVWMRRILKELGHNQEGCTTLMCDNSSTIKLSKNPIMHGRSKHIDVRFHFLRNLS 150
Query: 362 KEGAVEM 382
++G +E+
Sbjct: 151 RDGCIEL 157
>KYP44906.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 172
Score = 161 bits (407), Expect = 3e-48
Identities = 75/127 (59%), Positives = 92/127 (72%)
Frame = +2
Query: 2 RGGSNELLAYTDSDYAGDSEDSKSTSGYVFTMGDGVVAWSSKKQPIVTLLTTXXXXXXXX 181
+GG +L+ +TDSDYAGD EDSKSTSGYVF +G V+W SKKQPIVTL TT
Sbjct: 31 KGGEEDLITFTDSDYAGDEEDSKSTSGYVFLLGSRAVSWMSKKQPIVTLSTTEAEFVAAA 90
Query: 182 XXXXXXLWMRRVLEELGWQQSEGIILMCDNTSTIKLSRNPVLHGRSKYIRVRFHFLRDLT 361
+WMRR+L L Q ++MCDN+STIKLS+NPV+HGRSK+IRVRFHFLRDL
Sbjct: 91 ASACQSVWMRRILRNLNHAQEGSTVIMCDNSSTIKLSKNPVMHGRSKHIRVRFHFLRDLV 150
Query: 362 KEGAVEM 382
K+G +E+
Sbjct: 151 KDGEIEL 157
>KYP66580.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 380
Score = 164 bits (414), Expect = 8e-47
Identities = 80/127 (62%), Positives = 93/127 (73%)
Frame = +2
Query: 2 RGGSNELLAYTDSDYAGDSEDSKSTSGYVFTMGDGVVAWSSKKQPIVTLLTTXXXXXXXX 181
RGG ELLAYTDSDYAGD ED KSTSGYVF M G V+WSS+KQPIVTL TT
Sbjct: 210 RGGIEELLAYTDSDYAGDLEDRKSTSGYVFIMSGGSVSWSSRKQPIVTLSTTEVEFIAAA 269
Query: 182 XXXXXXLWMRRVLEELGWQQSEGIILMCDNTSTIKLSRNPVLHGRSKYIRVRFHFLRDLT 361
+WMRRVL+ELG++Q ++ CDN STI LS+NPV+HGRSK+I VRFHFLRDLT
Sbjct: 270 GCAYQAVWMRRVLKELGYKQEGSTVIKCDNCSTINLSKNPVMHGRSKHIDVRFHFLRDLT 329
Query: 362 KEGAVEM 382
K +E+
Sbjct: 330 KNNEIEL 336
>KYP57482.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 380
Score = 162 bits (410), Expect = 3e-46
Identities = 79/127 (62%), Positives = 93/127 (73%)
Frame = +2
Query: 2 RGGSNELLAYTDSDYAGDSEDSKSTSGYVFTMGDGVVAWSSKKQPIVTLLTTXXXXXXXX 181
RGG EL AYTDSDYAGD ED KSTSGYVF M G VAWSS+KQPIVT+ TT
Sbjct: 210 RGGIEELQAYTDSDYAGDLEDRKSTSGYVFIMSGGSVAWSSRKQPIVTISTTEAEFIAAA 269
Query: 182 XXXXXXLWMRRVLEELGWQQSEGIILMCDNTSTIKLSRNPVLHGRSKYIRVRFHFLRDLT 361
+WMRRVL+ELG++Q ++ CDN STIKLS+NPV+HG+SK+I VRFHFLRDLT
Sbjct: 270 GCACQAVWMRRVLKELGYKQEGSTVIKCDNYSTIKLSKNPVMHGKSKHIDVRFHFLRDLT 329
Query: 362 KEGAVEM 382
K +E+
Sbjct: 330 KNNEIEL 336
>KZV22085.1 retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dorcoceras hygrometricum]
Length = 536
Score = 163 bits (412), Expect = 3e-45
Identities = 74/126 (58%), Positives = 99/126 (78%)
Frame = +2
Query: 5 GGSNELLAYTDSDYAGDSEDSKSTSGYVFTMGDGVVAWSSKKQPIVTLLTTXXXXXXXXX 184
G ++L+AYTDSDYAGD +DSKSTSGY F M G VAWSS+KQPIVTL TT
Sbjct: 368 GTMSDLVAYTDSDYAGDMDDSKSTSGYAFMMSGGAVAWSSRKQPIVTLSTTEAEYVAAVA 427
Query: 185 XXXXXLWMRRVLEELGWQQSEGIILMCDNTSTIKLSRNPVLHGRSKYIRVRFHFLRDLTK 364
+WMRR+L+E+G +Q++ ++++CDNTSTIKLS+N ++HGRSK+IRVR+HFLRDLTK
Sbjct: 428 CACQAIWMRRILKEIGHEQAKEMVVLCDNTSTIKLSKNAIMHGRSKHIRVRYHFLRDLTK 487
Query: 365 EGAVEM 382
+G +++
Sbjct: 488 QGIIKL 493
>KZV40714.1 retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dorcoceras hygrometricum]
Length = 536
Score = 162 bits (411), Expect = 4e-45
Identities = 74/126 (58%), Positives = 99/126 (78%)
Frame = +2
Query: 5 GGSNELLAYTDSDYAGDSEDSKSTSGYVFTMGDGVVAWSSKKQPIVTLLTTXXXXXXXXX 184
G ++L+AYTDSDYAGD +DSKSTSGY F M G VAWSS+KQPIVTL TT
Sbjct: 368 GTISDLVAYTDSDYAGDMDDSKSTSGYAFMMSGGAVAWSSRKQPIVTLSTTEAEYVAAVA 427
Query: 185 XXXXXLWMRRVLEELGWQQSEGIILMCDNTSTIKLSRNPVLHGRSKYIRVRFHFLRDLTK 364
+WMRR+L+E+G +Q++ ++++CDNTSTIKLS+N ++HGRSK+IRVR+HFLRDLTK
Sbjct: 428 CACQAIWMRRILKEIGHEQAKEMVVLCDNTSTIKLSKNAIMHGRSKHIRVRYHFLRDLTK 487
Query: 365 EGAVEM 382
+G +++
Sbjct: 488 QGIIKL 493
>BAT89814.1 hypothetical protein VIGAN_06088500, partial [Vigna angularis var.
angularis]
Length = 172
Score = 152 bits (383), Expect = 2e-44
Identities = 69/129 (53%), Positives = 93/129 (72%)
Frame = +2
Query: 2 RGGSNELLAYTDSDYAGDSEDSKSTSGYVFTMGDGVVAWSSKKQPIVTLLTTXXXXXXXX 181
+GGS ++AY+DSD+AGD +D +STSG VF +G G V+WSSKKQPIVTL TT
Sbjct: 8 KGGSTNVVAYSDSDFAGDLDDRRSTSGSVFLLGFGAVSWSSKKQPIVTLSTTEAEYIAAA 67
Query: 182 XXXXXXLWMRRVLEELGWQQSEGIILMCDNTSTIKLSRNPVLHGRSKYIRVRFHFLRDLT 361
+W++R+LE+LG + +++CDN STI+LS+NPV HG+SK+I +RFHFLRDL
Sbjct: 68 SCACQCVWIKRILEKLGLNEQNSTLILCDNNSTIQLSKNPVFHGKSKHIDIRFHFLRDLV 127
Query: 362 KEGAVEMQY 388
K+G V M Y
Sbjct: 128 KDGVVRMSY 136
>AAF25964.2 F6N18.1 [Arabidopsis thaliana]
Length = 1207
Score = 163 bits (413), Expect = 3e-44
Identities = 75/129 (58%), Positives = 95/129 (73%)
Frame = +2
Query: 2 RGGSNELLAYTDSDYAGDSEDSKSTSGYVFTMGDGVVAWSSKKQPIVTLLTTXXXXXXXX 181
RGG+ EL+ + DSDYAGD +D KSTSGYVF +G G +AW+SKKQPIVTL TT
Sbjct: 1045 RGGATELVGFVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKKQPIVTLSTTEAEFVSAS 1104
Query: 182 XXXXXXLWMRRVLEELGWQQSEGIILMCDNTSTIKLSRNPVLHGRSKYIRVRFHFLRDLT 361
+W+R VLEE+G +Q G ++ CDN+STIKLS+NPVLHGRSK+I VR+HFLR+L
Sbjct: 1105 YGACQAVWLRNVLEEIGCRQEGGTLVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFLRELV 1164
Query: 362 KEGAVEMQY 388
KEG + + Y
Sbjct: 1165 KEGTIRLDY 1173
>AAG51247.1 copia-type polyprotein, putative; 28768-32772 [Arabidopsis thaliana]
Length = 1334
Score = 163 bits (413), Expect = 3e-44
Identities = 75/129 (58%), Positives = 95/129 (73%)
Frame = +2
Query: 2 RGGSNELLAYTDSDYAGDSEDSKSTSGYVFTMGDGVVAWSSKKQPIVTLLTTXXXXXXXX 181
RGG+ EL+ + DSDYAGD +D KSTSGYVF +G G +AW+SKKQPIVTL TT
Sbjct: 1172 RGGATELVGFVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKKQPIVTLSTTEAEFVSAS 1231
Query: 182 XXXXXXLWMRRVLEELGWQQSEGIILMCDNTSTIKLSRNPVLHGRSKYIRVRFHFLRDLT 361
+W+R VLEE+G +Q G ++ CDN+STIKLS+NPVLHGRSK+I VR+HFLR+L
Sbjct: 1232 YGACQAVWLRNVLEEIGCRQEGGTLVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFLRELV 1291
Query: 362 KEGAVEMQY 388
KEG + + Y
Sbjct: 1292 KEGTIRLDY 1300
>BAB11200.1 copia-type polyprotein [Arabidopsis thaliana] CAC37622.1 polyprotein
[Arabidopsis thaliana]
Length = 1334
Score = 163 bits (413), Expect = 3e-44
Identities = 75/129 (58%), Positives = 95/129 (73%)
Frame = +2
Query: 2 RGGSNELLAYTDSDYAGDSEDSKSTSGYVFTMGDGVVAWSSKKQPIVTLLTTXXXXXXXX 181
RGG+ EL+ + DSDYAGD +D KSTSGYVF +G G +AW+SKKQPIVTL TT
Sbjct: 1172 RGGATELVGFVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKKQPIVTLSTTEAEFVSAS 1231
Query: 182 XXXXXXLWMRRVLEELGWQQSEGIILMCDNTSTIKLSRNPVLHGRSKYIRVRFHFLRDLT 361
+W+R VLEE+G +Q G ++ CDN+STIKLS+NPVLHGRSK+I VR+HFLR+L
Sbjct: 1232 YGACQAVWLRNVLEEIGCRQEGGTLVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFLRELV 1291
Query: 362 KEGAVEMQY 388
KEG + + Y
Sbjct: 1292 KEGTIRLDY 1300
>JAU12536.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 491
Score = 159 bits (401), Expect = 6e-44
Identities = 76/127 (59%), Positives = 95/127 (74%)
Frame = +2
Query: 2 RGGSNELLAYTDSDYAGDSEDSKSTSGYVFTMGDGVVAWSSKKQPIVTLLTTXXXXXXXX 181
R GS LL YTDSDYAGD +D KSTSGYVF + G VAWSS+KQPIVTL +T
Sbjct: 330 RKGSLSLLGYTDSDYAGDIDDCKSTSGYVFLLSGGAVAWSSRKQPIVTLSSTEAEYVAAA 389
Query: 182 XXXXXXLWMRRVLEELGWQQSEGIILMCDNTSTIKLSRNPVLHGRSKYIRVRFHFLRDLT 361
+WM+RVL E+G++Q +G+ L CDNTSTIKLS+N V+HG+SK+IRVR+HFLR+L+
Sbjct: 390 TCACQAIWMKRVLGEIGFEQEDGMTLFCDNTSTIKLSKNAVMHGKSKHIRVRYHFLRELS 449
Query: 362 KEGAVEM 382
KEG V +
Sbjct: 450 KEGLVTL 456
>KYP77347.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 257
Score = 151 bits (381), Expect = 4e-43
Identities = 70/129 (54%), Positives = 93/129 (72%)
Frame = +2
Query: 2 RGGSNELLAYTDSDYAGDSEDSKSTSGYVFTMGDGVVAWSSKKQPIVTLLTTXXXXXXXX 181
R G +L +Y DSDYAGD +D KSTSGYVF + G ++WSS+KQPIVTL TT
Sbjct: 89 RQGKTDLTSYCDSDYAGDQDDRKSTSGYVFLLSSGAISWSSRKQPIVTLSTTEAEFVAAA 148
Query: 182 XXXXXXLWMRRVLEELGWQQSEGIILMCDNTSTIKLSRNPVLHGRSKYIRVRFHFLRDLT 361
+W++R+LEELG + E + ++CDN+S IKLS+NPV+HGRSK+I VRF FLR+L
Sbjct: 149 YCVCQGIWIKRILEELGVKLEESLSILCDNSSAIKLSKNPVMHGRSKHIDVRFLFLRNLC 208
Query: 362 KEGAVEMQY 388
KEG +E++Y
Sbjct: 209 KEGIIELKY 217
>CAN74984.1 hypothetical protein VITISV_035210 [Vitis vinifera]
Length = 2408
Score = 160 bits (405), Expect = 4e-43
Identities = 76/127 (59%), Positives = 97/127 (76%)
Frame = +2
Query: 8 GSNELLAYTDSDYAGDSEDSKSTSGYVFTMGDGVVAWSSKKQPIVTLLTTXXXXXXXXXX 187
G+ EL+AYTDSDYAGD +D KSTSGYVF + +GVV+WSSKKQP+VTL TT
Sbjct: 878 GNGELIAYTDSDYAGDVDDRKSTSGYVFLLSEGVVSWSSKKQPVVTLSTTEAEFVAAASC 937
Query: 188 XXXXLWMRRVLEELGWQQSEGIILMCDNTSTIKLSRNPVLHGRSKYIRVRFHFLRDLTKE 367
+WMRRVLE+L Q + ++CDN+STIKLS+NPV+HGRSK+I VRFHFLRDLT++
Sbjct: 938 ACQGVWMRRVLEKLCHSQGKCTTVLCDNSSTIKLSKNPVMHGRSKHIDVRFHFLRDLTRD 997
Query: 368 GAVEMQY 388
G E+++
Sbjct: 998 GVXELKH 1004
Score = 63.5 bits (153), Expect = 4e-09
Identities = 31/95 (32%), Positives = 51/95 (53%)
Frame = +2
Query: 107 VVAWSSKKQPIVTLLTTXXXXXXXXXXXXXXLWMRRVLEELGWQQSEGIILMCDNTSTIK 286
+++W SKKQ V +T LW+R +L++LG S L CDN S I
Sbjct: 2281 LISWRSKKQTFVARSSTEAEYRALADTTSELLWLRWLLKDLGVSTSSATPLYCDNQSAIH 2340
Query: 287 LSRNPVLHGRSKYIRVRFHFLRDLTKEGAVEMQYI 391
++ N V H R+K+I++ HF+R GA+++ ++
Sbjct: 2341 IAHNDVFHERTKHIKIDCHFIRYHLVHGALKLFFV 2375
>KYP40818.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 468
Score = 155 bits (392), Expect = 8e-43
Identities = 71/129 (55%), Positives = 94/129 (72%)
Frame = +2
Query: 2 RGGSNELLAYTDSDYAGDSEDSKSTSGYVFTMGDGVVAWSSKKQPIVTLLTTXXXXXXXX 181
R G +L +Y DSDYAGD +D KSTSGYVF + G ++WSS+KQPIVTL TT
Sbjct: 300 RQGKTDLTSYCDSDYAGDQDDRKSTSGYVFLLSSGAISWSSRKQPIVTLSTTEAEFVAAA 359
Query: 182 XXXXXXLWMRRVLEELGWQQSEGIILMCDNTSTIKLSRNPVLHGRSKYIRVRFHFLRDLT 361
+W++R+LEELG + E + ++CDN+S IKLS+NPV+HGRSK+I VRFHFLR+L
Sbjct: 360 YCVCQGIWIKRILEELGVKLEESLSILCDNSSAIKLSKNPVMHGRSKHIDVRFHFLRNLC 419
Query: 362 KEGAVEMQY 388
KEG +E++Y
Sbjct: 420 KEGIIELKY 428
>XP_013632421.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Brassica oleracea var. oleracea]
Length = 344
Score = 152 bits (383), Expect = 2e-42
Identities = 71/128 (55%), Positives = 88/128 (68%)
Frame = +2
Query: 5 GGSNELLAYTDSDYAGDSEDSKSTSGYVFTMGDGVVAWSSKKQPIVTLLTTXXXXXXXXX 184
GG +L+ Y DSDYAGD +D KSTSG+ F G G V+WSSKKQPIVTL TT
Sbjct: 183 GGEEKLVGYVDSDYAGDEDDRKSTSGFTFMFGGGAVSWSSKKQPIVTLSTTEAEYVAAAN 242
Query: 185 XXXXXLWMRRVLEELGWQQSEGIILMCDNTSTIKLSRNPVLHGRSKYIRVRFHFLRDLTK 364
+WMR +L E+G+ Q +G +L CDN+S IKLS+N VLHGRSK+I VRFHFLR+L
Sbjct: 243 GACQAVWMRNMLTEIGFGQGDGTVLFCDNSSAIKLSKNLVLHGRSKHIHVRFHFLRELVN 302
Query: 365 EGAVEMQY 388
EG + +Y
Sbjct: 303 EGIISTEY 310
>KYP40643.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 376
Score = 152 bits (385), Expect = 2e-42
Identities = 74/126 (58%), Positives = 90/126 (71%)
Frame = +2
Query: 2 RGGSNELLAYTDSDYAGDSEDSKSTSGYVFTMGDGVVAWSSKKQPIVTLLTTXXXXXXXX 181
+GG EL AYTDSDYAGD ED K+TS VF M G+VAWSS+KQPIVTL T
Sbjct: 205 KGGIEELRAYTDSDYAGDLEDRKNTSRNVFIMSGGLVAWSSRKQPIVTLSATEVEFIAAT 264
Query: 182 XXXXXXLWMRRVLEELGWQQSEGIILMCDNTSTIKLSRNPVLHGRSKYIRVRFHFLRDLT 361
+WMRRVL++LG+ Q E ++ CDN STIKLS+NPV+HGRSK+I +RFHFLRDLT
Sbjct: 265 GCACQAVWMRRVLKKLGYNQEESTVIKCDNCSTIKLSKNPVMHGRSKHIDLRFHFLRDLT 324
Query: 362 KEGAVE 379
K ++
Sbjct: 325 KNNEID 330
>JAU33129.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Noccaea caerulescens]
Length = 1052
Score = 157 bits (398), Expect = 3e-42
Identities = 76/127 (59%), Positives = 90/127 (70%)
Frame = +2
Query: 2 RGGSNELLAYTDSDYAGDSEDSKSTSGYVFTMGDGVVAWSSKKQPIVTLLTTXXXXXXXX 181
RG +EL YTDSDYAGD D +STSGY F + G VAW+SKKQP+VTL TT
Sbjct: 890 RGNVDELTVYTDSDYAGDVNDRRSTSGYAFLLSGGAVAWASKKQPVVTLSTTEAEFVAAA 949
Query: 182 XXXXXXLWMRRVLEELGWQQSEGIILMCDNTSTIKLSRNPVLHGRSKYIRVRFHFLRDLT 361
+WMRR+LEE G +Q +MCDN+S IKLS+NPVLHGRSK+I VRFHFLRDLT
Sbjct: 950 YCACQCVWMRRILEEFGLKQLRSTSIMCDNSSAIKLSKNPVLHGRSKHIDVRFHFLRDLT 1009
Query: 362 KEGAVEM 382
KEG V++
Sbjct: 1010 KEGVVKL 1016
>KYP33371.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 187
Score = 145 bits (367), Expect = 6e-42
Identities = 72/130 (55%), Positives = 91/130 (70%), Gaps = 1/130 (0%)
Frame = +2
Query: 2 RGGSNELLAYTDSDYAGDSEDSKSTSGYVFTMGDGVVAWSSKKQPIVTLLTTXXXXXXXX 181
+GG NELLAYTDSDY GD +D KSTSGYVF + V+WSSKKQPIV+L T
Sbjct: 22 KGGDNELLAYTDSDYEGDLDDRKSTSGYVFLLCSAAVSWSSKKQPIVSLSTIEAEFISAA 81
Query: 182 XXXXXXLWMRRVLEEL-GWQQSEGIILMCDNTSTIKLSRNPVLHGRSKYIRVRFHFLRDL 358
+W++RVLE+L G Q ++ CD+ S I+LS+NPV+HGRSK+I VRFHFLR+L
Sbjct: 82 SCACQAIWLKRVLEKLCGMQNQATTVIYCDSRSAIELSKNPVMHGRSKHIDVRFHFLRNL 141
Query: 359 TKEGAVEMQY 388
TK G V+M +
Sbjct: 142 TKTGTVKMMH 151