BLASTX nr result
ID: Panax24_contig00040254
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00040254
(877 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017232532.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 394 e-124
XP_017232529.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 394 e-124
KZN07589.1 hypothetical protein DCAR_008426 [Daucus carota subsp... 380 e-120
KZN05928.1 hypothetical protein DCAR_006765 [Daucus carota subsp... 379 e-118
XP_017236034.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 379 e-118
XP_017236029.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 379 e-118
XP_019072896.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 324 1e-98
XP_010661369.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 324 5e-98
XP_010661365.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 324 5e-98
CAN66198.1 hypothetical protein VITISV_011232 [Vitis vinifera] 318 3e-96
CDP09818.1 unnamed protein product [Coffea canephora] 313 3e-94
XP_011650447.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 312 8e-94
XP_017973942.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 308 6e-93
XP_007040111.2 PREDICTED: DNA-directed RNA polymerase IV subunit... 308 4e-92
XP_015871441.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 294 4e-92
GAV79426.1 RNA_pol_Rpb1_2 domain-containing protein/RNA_pol_Rpb1... 306 2e-91
XP_018820498.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 305 2e-91
EOY24612.1 DNA-directed RNA polymerase II subunit RPB1-B, putati... 305 2e-91
XP_018820497.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 305 3e-91
XP_011081158.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 303 9e-91
>XP_017232532.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Daucus carota subsp. sativus]
Length = 1440
Score = 394 bits (1013), Expect = e-124
Identities = 194/297 (65%), Positives = 242/297 (81%), Gaps = 5/297 (1%)
Frame = -2
Query: 876 LHPYFISDVAKVLNRICPGCKSVRRRVKSASPTSTHHRPVP-----CKYCDVHLKNKYPR 712
LHPY ISDVAK+LN+IC GCKS R R KSA +STH +P CKYCD K++YPR
Sbjct: 82 LHPYLISDVAKILNKICVGCKSERSRAKSADSSSTHKKPTHKKRERCKYCDGLRKDEYPR 141
Query: 711 MNFKVSTKEIFGRTAIFAQINERLWIKSLSLASDYWDFIPNDPQQEENSLQPNKRVLSHL 532
FKVS+KE+FGRTAIFA+IN+R++ + +LASDYW+F+ D QQ N+L+PN+RVLSHL
Sbjct: 142 TIFKVSSKEVFGRTAIFAKINDRVFSRIETLASDYWNFLAEDTQQAGNALKPNERVLSHL 201
Query: 531 QVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVNEFGQHMRFDERTRAYRKLVD 352
QV+ LLK+VDP+++K+FV+D K+ +F+++FPVTPNSHRVNEFG +RFDE TR YRKL +
Sbjct: 202 QVHELLKEVDPKIVKEFVKDKKDLIFMNNFPVTPNSHRVNEFGGQVRFDELTRCYRKLAN 261
Query: 351 FRGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQNEDAAPKMSGLKYIKELILGKR 172
F GSANELSTRVLDC K+ KLRSEK S+ KMF QNE+AAP +SGL++IKELILGKR
Sbjct: 262 FEGSANELSTRVLDCFKMCKLRSEKVST-----KMFNQNEEAAPNLSGLRFIKELILGKR 316
Query: 171 TDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRNWTTLGVRILAKGRTFIR 1
+DH FRMVVVGDP IKVDEIGVP HIA++MQ+SE+LNS NW +LG++IL K T+IR
Sbjct: 317 SDHTFRMVVVGDPRIKVDEIGVPSHIADSMQISEQLNSLNWESLGLKILRKRDTYIR 373
>XP_017232529.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Daucus carota subsp. sativus] XP_017232530.1 PREDICTED:
DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Daucus carota subsp. sativus] XP_017232531.1 PREDICTED:
DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Daucus carota subsp. sativus]
Length = 1441
Score = 394 bits (1013), Expect = e-124
Identities = 194/297 (65%), Positives = 242/297 (81%), Gaps = 5/297 (1%)
Frame = -2
Query: 876 LHPYFISDVAKVLNRICPGCKSVRRRVKSASPTSTHHRPVP-----CKYCDVHLKNKYPR 712
LHPY ISDVAK+LN+IC GCKS R R KSA +STH +P CKYCD K++YPR
Sbjct: 82 LHPYLISDVAKILNKICVGCKSERSRAKSADSSSTHKKPTHKKRERCKYCDGLRKDEYPR 141
Query: 711 MNFKVSTKEIFGRTAIFAQINERLWIKSLSLASDYWDFIPNDPQQEENSLQPNKRVLSHL 532
FKVS+KE+FGRTAIFA+IN+R++ + +LASDYW+F+ D QQ N+L+PN+RVLSHL
Sbjct: 142 TIFKVSSKEVFGRTAIFAKINDRVFSRIETLASDYWNFLAEDTQQAGNALKPNERVLSHL 201
Query: 531 QVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVNEFGQHMRFDERTRAYRKLVD 352
QV+ LLK+VDP+++K+FV+D K+ +F+++FPVTPNSHRVNEFG +RFDE TR YRKL +
Sbjct: 202 QVHELLKEVDPKIVKEFVKDKKDLIFMNNFPVTPNSHRVNEFGGQVRFDELTRCYRKLAN 261
Query: 351 FRGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQNEDAAPKMSGLKYIKELILGKR 172
F GSANELSTRVLDC K+ KLRSEK S+ KMF QNE+AAP +SGL++IKELILGKR
Sbjct: 262 FEGSANELSTRVLDCFKMCKLRSEKVST-----KMFNQNEEAAPNLSGLRFIKELILGKR 316
Query: 171 TDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRNWTTLGVRILAKGRTFIR 1
+DH FRMVVVGDP IKVDEIGVP HIA++MQ+SE+LNS NW +LG++IL K T+IR
Sbjct: 317 SDHTFRMVVVGDPRIKVDEIGVPSHIADSMQISEQLNSLNWESLGLKILRKRDTYIR 373
>KZN07589.1 hypothetical protein DCAR_008426 [Daucus carota subsp. sativus]
Length = 1213
Score = 380 bits (977), Expect = e-120
Identities = 189/298 (63%), Positives = 238/298 (79%), Gaps = 6/298 (2%)
Frame = -2
Query: 876 LHPYFISDVAKVLNRICPGCKSVRRRVK-SASPTSTHHRPVP-----CKYCDVHLKNKYP 715
LHPY ISDVAK+LN+IC GCKS R R K SA +STH +P CKYCD K++YP
Sbjct: 82 LHPYLISDVAKILNKICVGCKSERSRAKQSADSSSTHKKPTHKKRERCKYCDGLRKDEYP 141
Query: 714 RMNFKVSTKEIFGRTAIFAQINERLWIKSLSLASDYWDFIPNDPQQEENSLQPNKRVLSH 535
R FKVS+KE+FGRTAIFA+IN+R++ + +LASDYW+F+ D QQ N+L+PN+RVLSH
Sbjct: 142 RTIFKVSSKEVFGRTAIFAKINDRVFSRIETLASDYWNFLAEDTQQAGNALKPNERVLSH 201
Query: 534 LQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVNEFGQHMRFDERTRAYRKLV 355
LQV+ LLK+VDP+++K+FV+D K+ +F+++FPVTPNSHRVNEFG +RFDE TR YRKL
Sbjct: 202 LQVHELLKEVDPKIVKEFVKDKKDLIFMNNFPVTPNSHRVNEFGGQVRFDELTRCYRKLA 261
Query: 354 DFRGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQNEDAAPKMSGLKYIKELILGK 175
+F GSANELSTRVLDC K+ K +K + KMF QNE+AAP +SGL++IKELILGK
Sbjct: 262 NFEGSANELSTRVLDCFKMCK-------AKKVSTKMFNQNEEAAPNLSGLRFIKELILGK 314
Query: 174 RTDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRNWTTLGVRILAKGRTFIR 1
R+DH FRMVVVGDP IKVDEIGVP HIA++MQ+SE+LNS NW +LG++IL K T+IR
Sbjct: 315 RSDHTFRMVVVGDPRIKVDEIGVPSHIADSMQISEQLNSLNWESLGLKILRKRDTYIR 372
>KZN05928.1 hypothetical protein DCAR_006765 [Daucus carota subsp. sativus]
Length = 1396
Score = 379 bits (974), Expect = e-118
Identities = 192/296 (64%), Positives = 233/296 (78%), Gaps = 4/296 (1%)
Frame = -2
Query: 876 LHPYFISDVAKVLNRICPGCKSVRRRVKSASPTSTHHRPVP----CKYCDVHLKNKYPRM 709
LHPYFISDV K+LNRIC CKS R R KSAS ST +P CKYCD K++YPR
Sbjct: 82 LHPYFISDVVKILNRICVKCKSERIRTKSASSPSTKRKPKRKRGCCKYCDGRSKDEYPRT 141
Query: 708 NFKVSTKEIFGRTAIFAQINERLWIKSLSLASDYWDFIPNDPQQEENSLQPNKRVLSHLQ 529
FKVS KE+F T I A+INER ++ +ASDYWDF+ NDPQ E N+L+P++R+L++ Q
Sbjct: 142 IFKVSGKEMFESTVILARINERS--RTPRVASDYWDFLQNDPQ-EGNTLKPHERILTYTQ 198
Query: 528 VYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVNEFGQHMRFDERTRAYRKLVDF 349
V LLK +D R +KDFV+D KN + +++FPVTPNSHRVNE GQ MRFDERTR YRKLVDF
Sbjct: 199 VQELLKGIDLRFMKDFVKDEKNLLSMNNFPVTPNSHRVNECGQQMRFDERTRFYRKLVDF 258
Query: 348 RGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQNEDAAPKMSGLKYIKELILGKRT 169
+G ANELS RVLDCLK++KL+ EK S A P+MF EDAAPKMSGLK+IKELILGKR+
Sbjct: 259 KGPANELSARVLDCLKMAKLKPEKVSVTANGPQMFHNFEDAAPKMSGLKFIKELILGKRS 318
Query: 168 DHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRNWTTLGVRILAKGRTFIR 1
DH FRMVVVGDP+IK+DEIGVP HIA+AMQ+SE+LNS+NW LG+RIL +G T++R
Sbjct: 319 DHTFRMVVVGDPSIKIDEIGVPCHIAQAMQISEQLNSQNWENLGLRILTRGETYVR 374
>XP_017236034.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Daucus carota subsp. sativus]
Length = 1434
Score = 379 bits (974), Expect = e-118
Identities = 192/296 (64%), Positives = 233/296 (78%), Gaps = 4/296 (1%)
Frame = -2
Query: 876 LHPYFISDVAKVLNRICPGCKSVRRRVKSASPTSTHHRPVP----CKYCDVHLKNKYPRM 709
LHPYFISDV K+LNRIC CKS R R KSAS ST +P CKYCD K++YPR
Sbjct: 82 LHPYFISDVVKILNRICVKCKSERIRTKSASSPSTKRKPKRKRGCCKYCDGRSKDEYPRT 141
Query: 708 NFKVSTKEIFGRTAIFAQINERLWIKSLSLASDYWDFIPNDPQQEENSLQPNKRVLSHLQ 529
FKVS KE+F T I A+INER ++ +ASDYWDF+ NDPQ E N+L+P++R+L++ Q
Sbjct: 142 IFKVSGKEMFESTVILARINERS--RTPRVASDYWDFLQNDPQ-EGNTLKPHERILTYTQ 198
Query: 528 VYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVNEFGQHMRFDERTRAYRKLVDF 349
V LLK +D R +KDFV+D KN + +++FPVTPNSHRVNE GQ MRFDERTR YRKLVDF
Sbjct: 199 VQELLKGIDLRFMKDFVKDEKNLLSMNNFPVTPNSHRVNECGQQMRFDERTRFYRKLVDF 258
Query: 348 RGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQNEDAAPKMSGLKYIKELILGKRT 169
+G ANELS RVLDCLK++KL+ EK S A P+MF EDAAPKMSGLK+IKELILGKR+
Sbjct: 259 KGPANELSARVLDCLKMAKLKPEKVSVTANGPQMFHNFEDAAPKMSGLKFIKELILGKRS 318
Query: 168 DHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRNWTTLGVRILAKGRTFIR 1
DH FRMVVVGDP+IK+DEIGVP HIA+AMQ+SE+LNS+NW LG+RIL +G T++R
Sbjct: 319 DHTFRMVVVGDPSIKIDEIGVPCHIAQAMQISEQLNSQNWENLGLRILTRGETYVR 374
>XP_017236029.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Daucus carota subsp. sativus] XP_017236030.1 PREDICTED:
DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Daucus carota subsp. sativus] XP_017236031.1 PREDICTED:
DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Daucus carota subsp. sativus] XP_017236032.1 PREDICTED:
DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Daucus carota subsp. sativus] XP_017236033.1 PREDICTED:
DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Daucus carota subsp. sativus]
Length = 1435
Score = 379 bits (974), Expect = e-118
Identities = 192/296 (64%), Positives = 233/296 (78%), Gaps = 4/296 (1%)
Frame = -2
Query: 876 LHPYFISDVAKVLNRICPGCKSVRRRVKSASPTSTHHRPVP----CKYCDVHLKNKYPRM 709
LHPYFISDV K+LNRIC CKS R R KSAS ST +P CKYCD K++YPR
Sbjct: 82 LHPYFISDVVKILNRICVKCKSERIRTKSASSPSTKRKPKRKRGCCKYCDGRSKDEYPRT 141
Query: 708 NFKVSTKEIFGRTAIFAQINERLWIKSLSLASDYWDFIPNDPQQEENSLQPNKRVLSHLQ 529
FKVS KE+F T I A+INER ++ +ASDYWDF+ NDPQ E N+L+P++R+L++ Q
Sbjct: 142 IFKVSGKEMFESTVILARINERS--RTPRVASDYWDFLQNDPQ-EGNTLKPHERILTYTQ 198
Query: 528 VYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVNEFGQHMRFDERTRAYRKLVDF 349
V LLK +D R +KDFV+D KN + +++FPVTPNSHRVNE GQ MRFDERTR YRKLVDF
Sbjct: 199 VQELLKGIDLRFMKDFVKDEKNLLSMNNFPVTPNSHRVNECGQQMRFDERTRFYRKLVDF 258
Query: 348 RGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQNEDAAPKMSGLKYIKELILGKRT 169
+G ANELS RVLDCLK++KL+ EK S A P+MF EDAAPKMSGLK+IKELILGKR+
Sbjct: 259 KGPANELSARVLDCLKMAKLKPEKVSVTANGPQMFHNFEDAAPKMSGLKFIKELILGKRS 318
Query: 168 DHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRNWTTLGVRILAKGRTFIR 1
DH FRMVVVGDP+IK+DEIGVP HIA+AMQ+SE+LNS+NW LG+RIL +G T++R
Sbjct: 319 DHTFRMVVVGDPSIKIDEIGVPCHIAQAMQISEQLNSQNWENLGLRILTRGETYVR 374
>XP_019072896.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X4
[Vitis vinifera]
Length = 1243
Score = 324 bits (830), Expect = 1e-98
Identities = 169/310 (54%), Positives = 219/310 (70%), Gaps = 18/310 (5%)
Frame = -2
Query: 876 LHPYFISDVAKVLNRICPGCKSVRRR--VKSASPTSTHHRPVPCKYCDVHLKNKYPRMNF 703
LHPYF+++V ++LN+ICPGCKS R+ VK A S R CKYC + + YP M F
Sbjct: 82 LHPYFLTEVVQILNKICPGCKSTRQGQWVKGADSGSRRLRSKGCKYCAANSNDWYPTMKF 141
Query: 702 KVSTKEIFGRTAIFAQINERLWIKSLS------LASDYWDFIPNDPQQEENSLQPNKRVL 541
KVS+K++F +TAI ++NE+L K L DYWDFIP DPQQEEN L PN+RVL
Sbjct: 142 KVSSKDLFRKTAIIVEMNEKLPKKLQKKSFRPVLPLDYWDFIPKDPQQEENCLNPNRRVL 201
Query: 540 SHLQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVNEF------GQHMRFDER 379
SH QV++LLKD+DP +K+FV +S FL+ PVTPN+HRV E GQ + FD+
Sbjct: 202 SHAQVHYLLKDIDPGFIKEFVS-RMDSFFLNCLPVTPNNHRVTEITHALSNGQTLIFDQH 260
Query: 378 TRAYRKLVDFRGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQNEDAAPKMSGLKY 199
+RAY+KLVDFRG+ANELS RVLDCLK SKLRSEKS+SK D+A KMSGLK+
Sbjct: 261 SRAYKKLVDFRGTANELSCRVLDCLKTSKLRSEKSTSK-----------DSASKMSGLKW 309
Query: 198 IKELILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRNWTTL----GVR 31
IKE++LGKRT+H+FRM+VVGDP +++ EIG+P HIAE + +SE LNS NW + +R
Sbjct: 310 IKEVLLGKRTNHSFRMIVVGDPKLRLSEIGIPCHIAEELLISEHLNSWNWEKVTNGCNLR 369
Query: 30 ILAKGRTFIR 1
+L KG+T++R
Sbjct: 370 LLEKGQTYVR 379
>XP_010661369.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Vitis vinifera]
Length = 1458
Score = 324 bits (830), Expect = 5e-98
Identities = 169/310 (54%), Positives = 219/310 (70%), Gaps = 18/310 (5%)
Frame = -2
Query: 876 LHPYFISDVAKVLNRICPGCKSVRRR--VKSASPTSTHHRPVPCKYCDVHLKNKYPRMNF 703
LHPYF+++V ++LN+ICPGCKS R+ VK A S R CKYC + + YP M F
Sbjct: 82 LHPYFLTEVVQILNKICPGCKSTRQGQWVKGADSGSRRLRSKGCKYCAANSNDWYPTMKF 141
Query: 702 KVSTKEIFGRTAIFAQINERLWIKSLS------LASDYWDFIPNDPQQEENSLQPNKRVL 541
KVS+K++F +TAI ++NE+L K L DYWDFIP DPQQEEN L PN+RVL
Sbjct: 142 KVSSKDLFRKTAIIVEMNEKLPKKLQKKSFRPVLPLDYWDFIPKDPQQEENCLNPNRRVL 201
Query: 540 SHLQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVNEF------GQHMRFDER 379
SH QV++LLKD+DP +K+FV +S FL+ PVTPN+HRV E GQ + FD+
Sbjct: 202 SHAQVHYLLKDIDPGFIKEFVS-RMDSFFLNCLPVTPNNHRVTEITHALSNGQTLIFDQH 260
Query: 378 TRAYRKLVDFRGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQNEDAAPKMSGLKY 199
+RAY+KLVDFRG+ANELS RVLDCLK SKLRSEKS+SK D+A KMSGLK+
Sbjct: 261 SRAYKKLVDFRGTANELSCRVLDCLKTSKLRSEKSTSK-----------DSASKMSGLKW 309
Query: 198 IKELILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRNWTTL----GVR 31
IKE++LGKRT+H+FRM+VVGDP +++ EIG+P HIAE + +SE LNS NW + +R
Sbjct: 310 IKEVLLGKRTNHSFRMIVVGDPKLRLSEIGIPCHIAEELLISEHLNSWNWEKVTNGCNLR 369
Query: 30 ILAKGRTFIR 1
+L KG+T++R
Sbjct: 370 LLEKGQTYVR 379
>XP_010661365.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Vitis vinifera]
Length = 1460
Score = 324 bits (830), Expect = 5e-98
Identities = 169/310 (54%), Positives = 219/310 (70%), Gaps = 18/310 (5%)
Frame = -2
Query: 876 LHPYFISDVAKVLNRICPGCKSVRRR--VKSASPTSTHHRPVPCKYCDVHLKNKYPRMNF 703
LHPYF+++V ++LN+ICPGCKS R+ VK A S R CKYC + + YP M F
Sbjct: 82 LHPYFLTEVVQILNKICPGCKSTRQGQWVKGADSGSRRLRSKGCKYCAANSNDWYPTMKF 141
Query: 702 KVSTKEIFGRTAIFAQINERLWIKSLS------LASDYWDFIPNDPQQEENSLQPNKRVL 541
KVS+K++F +TAI ++NE+L K L DYWDFIP DPQQEEN L PN+RVL
Sbjct: 142 KVSSKDLFRKTAIIVEMNEKLPKKLQKKSFRPVLPLDYWDFIPKDPQQEENCLNPNRRVL 201
Query: 540 SHLQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVNEF------GQHMRFDER 379
SH QV++LLKD+DP +K+FV +S FL+ PVTPN+HRV E GQ + FD+
Sbjct: 202 SHAQVHYLLKDIDPGFIKEFVS-RMDSFFLNCLPVTPNNHRVTEITHALSNGQTLIFDQH 260
Query: 378 TRAYRKLVDFRGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQNEDAAPKMSGLKY 199
+RAY+KLVDFRG+ANELS RVLDCLK SKLRSEKS+SK D+A KMSGLK+
Sbjct: 261 SRAYKKLVDFRGTANELSCRVLDCLKTSKLRSEKSTSK-----------DSASKMSGLKW 309
Query: 198 IKELILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRNWTTL----GVR 31
IKE++LGKRT+H+FRM+VVGDP +++ EIG+P HIAE + +SE LNS NW + +R
Sbjct: 310 IKEVLLGKRTNHSFRMIVVGDPKLRLSEIGIPCHIAEELLISEHLNSWNWEKVTNGCNLR 369
Query: 30 ILAKGRTFIR 1
+L KG+T++R
Sbjct: 370 LLEKGQTYVR 379
>CAN66198.1 hypothetical protein VITISV_011232 [Vitis vinifera]
Length = 1393
Score = 318 bits (816), Expect = 3e-96
Identities = 169/313 (53%), Positives = 219/313 (69%), Gaps = 21/313 (6%)
Frame = -2
Query: 876 LHPYFISDVAKVLNRICPGCKSVRRR--VKSASPTSTHHRPVPCKYCDVHLKNKYPRMNF 703
LHPYF+++V ++LN+ICPGCKS R+ VK A S R CKYC + + YP M F
Sbjct: 82 LHPYFLTEVVQILNKICPGCKSTRQGQWVKGADSGSRRLRSKGCKYCAANSNDWYPTMKF 141
Query: 702 KVSTKEIFGRTAIFAQINERLWIKSLS------LASDYWDFIPNDPQQEENSLQPNKRVL 541
KVS+K++F +TAI ++NE+L K L DYWDFIP DPQQEEN L PN+RVL
Sbjct: 142 KVSSKDLFRKTAIIVEMNEKLPKKLQKKSFRPVLPLDYWDFIPKDPQQEENCLNPNRRVL 201
Query: 540 SHLQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVNEF------GQHMRFDER 379
SH QV++LLKD+DP +K+FV +S FL+ PVTPN+HRV E GQ + FD+
Sbjct: 202 SHAQVHYLLKDIDPGFIKEFVS-RMDSFFLNCLPVTPNNHRVTEITHALSNGQTLIFDQH 260
Query: 378 TRAYRKLVDFRGSANELSTRVLDCLKISK---LRSEKSSSKAYAPKMFIQNEDAAPKMSG 208
+RAY+KLVDFRG+ANELS RVLDCLK SK LRSEKS+SK D+A KMSG
Sbjct: 261 SRAYKKLVDFRGTANELSCRVLDCLKTSKASNLRSEKSTSK-----------DSASKMSG 309
Query: 207 LKYIKELILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRNWTTL---- 40
LK+IKE++LGKRT+H+FRM+VVGDP +++ EIG+P HIAE + +SE LNS NW +
Sbjct: 310 LKWIKEVLLGKRTNHSFRMIVVGDPKLRLSEIGIPCHIAEELLISEHLNSWNWEKVTNGC 369
Query: 39 GVRILAKGRTFIR 1
+R+L KG+T++R
Sbjct: 370 NLRLLEKGQTYVR 382
>CDP09818.1 unnamed protein product [Coffea canephora]
Length = 1511
Score = 313 bits (803), Expect = 3e-94
Identities = 161/285 (56%), Positives = 214/285 (75%), Gaps = 6/285 (2%)
Frame = -2
Query: 876 LHPYFISDVAKVLNRICPGCKSVR-RRVKSASPTSTHHRPVPCKYCDVHLKNKYPRMNFK 700
L+PYF+ +VA++LN+ICP CKSVR +VKS+ TS CKYCD ++ YP M FK
Sbjct: 122 LNPYFLPEVAQILNKICPACKSVRVNKVKSSGSTSVRDHSDTCKYCDGRSRDSYPPMKFK 181
Query: 699 VSTKEIFGRTAIFAQINERLWIKSLS---LASDYWDFIPNDPQQEENSLQPNKRVLSHLQ 529
V++K++F +TAI A+++ER S +ASDYWD IP+D QQ+ ++L NKR+LSH Q
Sbjct: 182 VTSKDVFAKTAISAEVSERSSSNRSSNGSMASDYWDIIPSDAQQDLSNLGSNKRLLSHAQ 241
Query: 528 VYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVNEFGQHMRFDERTRAYRKLVDF 349
VY++LKDVDPR L+ F++ K+S+FL+ F +TPN HRV E GQH+ FD +T+ Y+KL+DF
Sbjct: 242 VYNILKDVDPRFLESFLK-RKSSVFLNCFLLTPNCHRVTELGQHITFDTKTKLYKKLIDF 300
Query: 348 RGSANELSTRVLDCLKISKLRSEKSS--SKAYAPKMFIQNEDAAPKMSGLKYIKELILGK 175
RG+ANELS RVLD +K+SK+RSEKSS + A++ F +D+A SGLKYIKEL+LGK
Sbjct: 301 RGTANELSARVLDLIKVSKVRSEKSSAINSAFSVLGF---KDSAVATSGLKYIKELLLGK 357
Query: 174 RTDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRNWTTL 40
RTDHAFRMVVVGDPNI + EIG+PRHIAE + VSE +N N+ L
Sbjct: 358 RTDHAFRMVVVGDPNINLGEIGMPRHIAEKLLVSEHVNKWNFGKL 402
>XP_011650447.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Cucumis sativus] XP_011650448.1 PREDICTED: DNA-directed
RNA polymerase IV subunit 1 isoform X1 [Cucumis sativus]
XP_011650449.1 PREDICTED: DNA-directed RNA polymerase IV
subunit 1 isoform X1 [Cucumis sativus] KGN55963.1
hypothetical protein Csa_3G039340 [Cucumis sativus]
Length = 1483
Score = 312 bits (800), Expect = 8e-94
Identities = 162/312 (51%), Positives = 221/312 (70%), Gaps = 20/312 (6%)
Frame = -2
Query: 876 LHPYFISDVAKVLNRICPGCKSVRRRV--KSASPTSTHHRPVPCKYCDVHLKNKYPRMNF 703
+HPYF+S+VA+VLN++CPGCKSVR+ + K PTS ++RP C+YC LK+ YP M F
Sbjct: 98 IHPYFLSEVAQVLNKVCPGCKSVRQELWGKVEDPTSDYNRPKGCRYCFGSLKDWYPPMRF 157
Query: 702 KVSTKEIFGRTAIFAQINERLWIKSLS------LASDYWDFIPNDPQQEENSLQPNKRVL 541
K+ST ++F ++ I ++ E + K L SDYWDFIP D QQEE+ +PN+++L
Sbjct: 158 KLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKIL 217
Query: 540 SHLQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVNEF------GQHMRFDER 379
+H QV++LLKD+DP+ LK FV +S+FL+SFPVTPNSHRV E GQ + FDER
Sbjct: 218 THAQVHYLLKDIDPKFLKKFVPAI-DSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDER 276
Query: 378 TRAYRKLVDFRGSANELSTRVLDCLKISKLRSEKSSSK--AYAPKMFIQNEDAAPKMSGL 205
TRAY+K+VDFRG+ANEL +RVLDCLKISKL EK +K Y K +D A SGL
Sbjct: 277 TRAYKKVVDFRGTANELGSRVLDCLKISKLSPEKLQNKDLVYQQKKI---KDTATSSSGL 333
Query: 204 KYIKELILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRNW----TTLG 37
++IK+++LGKR+DH FRMVVVGDPNI++ EIG+P H+AE +Q+SE L+S N T+
Sbjct: 334 RWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLSTSCY 393
Query: 36 VRILAKGRTFIR 1
+ ++ KG ++R
Sbjct: 394 LHLVEKGEIYVR 405
>XP_017973942.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3
[Theobroma cacao]
Length = 1203
Score = 308 bits (788), Expect = 6e-93
Identities = 160/310 (51%), Positives = 223/310 (71%), Gaps = 18/310 (5%)
Frame = -2
Query: 876 LHPYFISDVAKVLNRICPGCKSVRR--RVKSASPTSTHHRPVPCKYCDVHLKNKYPRMNF 703
LHPYF+S+V ++LN+ICPGCKSVR+ R+K A+ S ++ CKYC + + YP MNF
Sbjct: 85 LHPYFLSEVVQILNKICPGCKSVRKDLRIKGANSVSKVNQRKGCKYCVGNSIDWYPPMNF 144
Query: 702 KVSTKEIFGRTAIFAQINERLWIK-----SLSLASDYWDFIPNDPQQEENSLQPNKRVLS 538
K+S+K++F ++AI +++E+ +K +L SDYWDFIP D QQEE+ ++PN+RVLS
Sbjct: 145 KISSKDLFRKSAIIVEVSEKSSMKVRKRGKQALPSDYWDFIPKDEQQEESLIRPNRRVLS 204
Query: 537 HLQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVNEF------GQHMRFDERT 376
H QV +LLKDVDP +K FV + +S+FL+ FPVTPNSHRV E GQ + FD+RT
Sbjct: 205 HSQVRYLLKDVDPEFIKKFVL-SMDSIFLNCFPVTPNSHRVTEIMHASSNGQRLIFDQRT 263
Query: 375 RAYRKLVDFRGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQ-NEDAAPKMSGLKY 199
R Y+KL DFRG ANELS+ VL+CLKISKL EK S++ A + + N+D+A MSGL+Y
Sbjct: 264 RVYKKLADFRGIANELSSHVLECLKISKLHLEKPSNEESALVLAQKRNKDSASNMSGLRY 323
Query: 198 IKELILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRNWTTL----GVR 31
+K++ILGKR DH FRMV+ G+PN+K+ EIG+P H+AE +Q++E+LN+ N L +R
Sbjct: 324 MKDVILGKRNDHCFRMVLTGNPNLKLSEIGIPCHVAERLQIAEQLNNWNEERLKACCDLR 383
Query: 30 ILAKGRTFIR 1
+L KG +R
Sbjct: 384 LLEKGEIHVR 393
>XP_007040111.2 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Theobroma cacao]
Length = 1484
Score = 308 bits (788), Expect = 4e-92
Identities = 160/310 (51%), Positives = 223/310 (71%), Gaps = 18/310 (5%)
Frame = -2
Query: 876 LHPYFISDVAKVLNRICPGCKSVRR--RVKSASPTSTHHRPVPCKYCDVHLKNKYPRMNF 703
LHPYF+S+V ++LN+ICPGCKSVR+ R+K A+ S ++ CKYC + + YP MNF
Sbjct: 85 LHPYFLSEVVQILNKICPGCKSVRKDLRIKGANSVSKVNQRKGCKYCVGNSIDWYPPMNF 144
Query: 702 KVSTKEIFGRTAIFAQINERLWIK-----SLSLASDYWDFIPNDPQQEENSLQPNKRVLS 538
K+S+K++F ++AI +++E+ +K +L SDYWDFIP D QQEE+ ++PN+RVLS
Sbjct: 145 KISSKDLFRKSAIIVEVSEKSSMKVRKRGKQALPSDYWDFIPKDEQQEESLIRPNRRVLS 204
Query: 537 HLQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVNEF------GQHMRFDERT 376
H QV +LLKDVDP +K FV + +S+FL+ FPVTPNSHRV E GQ + FD+RT
Sbjct: 205 HSQVRYLLKDVDPEFIKKFVL-SMDSIFLNCFPVTPNSHRVTEIMHASSNGQRLIFDQRT 263
Query: 375 RAYRKLVDFRGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQ-NEDAAPKMSGLKY 199
R Y+KL DFRG ANELS+ VL+CLKISKL EK S++ A + + N+D+A MSGL+Y
Sbjct: 264 RVYKKLADFRGIANELSSHVLECLKISKLHLEKPSNEESALVLAQKRNKDSASNMSGLRY 323
Query: 198 IKELILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRNWTTL----GVR 31
+K++ILGKR DH FRMV+ G+PN+K+ EIG+P H+AE +Q++E+LN+ N L +R
Sbjct: 324 MKDVILGKRNDHCFRMVLTGNPNLKLSEIGIPCHVAERLQIAEQLNNWNEERLKACCDLR 383
Query: 30 ILAKGRTFIR 1
+L KG +R
Sbjct: 384 LLEKGEIHVR 393
>XP_015871441.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like, partial
[Ziziphus jujuba]
Length = 631
Score = 294 bits (753), Expect = 4e-92
Identities = 154/304 (50%), Positives = 206/304 (67%), Gaps = 12/304 (3%)
Frame = -2
Query: 876 LHPYFISDVAKVLNRICPGCKSVR--RRVKSASPTSTHHRPVPCKYCDVHLKNKYPRMNF 703
LHPYF+S+V ++LN+ICP CKS R R+VK + + +H+P C YC M F
Sbjct: 95 LHPYFLSEVVQILNKICPRCKSTRQSRQVKGPNSITGYHQPTGCSYCI----GSSSTMKF 150
Query: 702 KVSTKEIFGRTAIFAQINERLWIKSLSLASDYWDFIPNDPQQEENSLQPNKRVLSHLQVY 523
KVS+K++F R+ I ++ ++L ++ D+WDFIP D QQEE+ ++PNKRVLSH QV+
Sbjct: 151 KVSSKDLFSRSTITVEVTDKL-LEKFKSTDDFWDFIPKDAQQEESCMKPNKRVLSHAQVH 209
Query: 522 HLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVNEF------GQHMRFDERTRAYRK 361
+LL +DP +K +V +S+FL+ FPVTPNSHRV EF GQ + FDERTRAY+K
Sbjct: 210 YLLNAIDPDFIKKYVA-RTDSLFLNCFPVTPNSHRVTEFINSFSNGQRLIFDERTRAYKK 268
Query: 360 LVDFRGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQNEDAAPKMSGLKYIKELIL 181
LVDFRG+AN+L +RVLDCLKISKL + SK D+ K GL++IK++IL
Sbjct: 269 LVDFRGAANDLGSRVLDCLKISKLSIGPNPSKDLVIGQQKSIRDSPSKTCGLRWIKDVIL 328
Query: 180 GKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRNWT----TLGVRILAKGR 13
GKR+DH FRMVVVGDPNIK++EIG+P HIAE M VSERLN N +R++ KG
Sbjct: 329 GKRSDHCFRMVVVGDPNIKLNEIGIPCHIAERMHVSERLNRWNLDKSDGCWNLRLIEKGE 388
Query: 12 TFIR 1
++R
Sbjct: 389 IYVR 392
>GAV79426.1 RNA_pol_Rpb1_2 domain-containing protein/RNA_pol_Rpb1_3
domain-containing protein/RNA_pol_Rpb1_1
domain-containing protein/RNA_pol_Rpb1_4
domain-containing protein/DUF3223 domain-containing
protein, partial [Cephalotus follicularis]
Length = 1513
Score = 306 bits (783), Expect = 2e-91
Identities = 158/306 (51%), Positives = 218/306 (71%), Gaps = 14/306 (4%)
Frame = -2
Query: 876 LHPYFISDVAKVLNRICPGCKSVRR--RVKSASPTSTHHRPVPCKYCDVHLKNKYPRMNF 703
++PY++S+VA++LN+ICPGCKS+R+ VK+A S H+ C YC + YP M F
Sbjct: 135 INPYYLSEVAQILNKICPGCKSIRKDLHVKAADLMSREHQYRGCNYCLGRSADWYPSMKF 194
Query: 702 KVSTKEIFGRTAIFAQINERLWIKS--LSLASDYWDFIPNDPQQEENSLQPNKRVLSHLQ 529
KVS+ ++F +TAI +I E+ K L SD+WDFIP DPQ EEN +PN+R+LSH Q
Sbjct: 195 KVSSNDVFKKTAIVVEIIEKRKNKKGILLPPSDFWDFIPKDPQHEENVTKPNRRILSHAQ 254
Query: 528 VYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVNEF------GQHMRFDERTRAY 367
V+HLL +DP+ +K +V + +F++ FPVTPN+HRV E GQ + FD RTRAY
Sbjct: 255 VHHLLDGIDPKFIKKYVS-RIDLLFINCFPVTPNNHRVTEITHAFSNGQRLIFDTRTRAY 313
Query: 366 RKLVDFRGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQNEDAAPKMSGLKYIKEL 187
+KLVDFRGSANELS+RVLDCLKISK+ S+KS+S+ + +N+D + MSGL+Y+K++
Sbjct: 314 KKLVDFRGSANELSSRVLDCLKISKVYSDKSTSED-PYEALRKNKDTSFTMSGLRYMKDV 372
Query: 186 ILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRNW----TTLGVRILAK 19
+LGKR DH FRMVV+GDPN+K+ EIG+P HIAE++Q+SE LN N T G+R+L K
Sbjct: 373 VLGKRNDHCFRMVVIGDPNLKLSEIGIPCHIAESLQISEFLNRFNLEILKTCCGLRLLEK 432
Query: 18 GRTFIR 1
G ++R
Sbjct: 433 GEIYVR 438
>XP_018820498.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Juglans regia] XP_018820499.1 PREDICTED: DNA-directed
RNA polymerase IV subunit 1 isoform X2 [Juglans regia]
XP_018820500.1 PREDICTED: DNA-directed RNA polymerase IV
subunit 1 isoform X2 [Juglans regia] XP_018820501.1
PREDICTED: DNA-directed RNA polymerase IV subunit 1
isoform X2 [Juglans regia]
Length = 1475
Score = 305 bits (782), Expect = 2e-91
Identities = 167/310 (53%), Positives = 212/310 (68%), Gaps = 18/310 (5%)
Frame = -2
Query: 876 LHPYFISDVAKVLNRICPGCKSVRR--RVKSASPTSTHHRPVPCKYCDVHLKNKYPRMNF 703
LHPYF+S+VAK+LN+ICPGCKSVR+ +VK +H + CKYC + YP + F
Sbjct: 82 LHPYFLSEVAKILNKICPGCKSVRQELKVKDGDSVRSHRQSKSCKYCAGNSVEWYPTVKF 141
Query: 702 KVSTKEIFGRTAIFAQINERL----WIKSL-SLASDYWDFIPNDPQQEENSLQPNKRVLS 538
KVS+ E+F AI +INE+L KS L++D+WDFIP D QQEEN L+PN+RVLS
Sbjct: 142 KVSSTEVFRNCAIIVEINEKLKNNVQKKSFRGLSADFWDFIPKDEQQEENCLKPNRRVLS 201
Query: 537 HLQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVNEF------GQHMRFDERT 376
H QV +LL DVDP+L+K FV S+FL+ FPVTPN HRV E GQ + FD+RT
Sbjct: 202 HAQVRYLLNDVDPKLIKKFVL-RIESLFLNCFPVTPNCHRVTEVTHAFSNGQRLVFDDRT 260
Query: 375 RAYRKLVDFRGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQNEDAAPKMS-GLKY 199
RAY+KLVDFRG ANEL +RVLDCLKISKL SEK K Q + A P +S GL++
Sbjct: 261 RAYKKLVDFRGIANELGSRVLDCLKISKLSSEKLPDKFLVSVQ--QKKGADPSISSGLRW 318
Query: 198 IKELILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRNWTTLG----VR 31
IK+++LGKR DH FRMVVVGDP+IK+ EIG+P HIAE +Q+SE LN N+ L +
Sbjct: 319 IKDVVLGKRNDHCFRMVVVGDPHIKLSEIGIPCHIAERLQISESLNRWNFDKLSDCCRLC 378
Query: 30 ILAKGRTFIR 1
+ KG ++R
Sbjct: 379 FIEKGEVYVR 388
>EOY24612.1 DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
cacao]
Length = 1484
Score = 305 bits (782), Expect = 2e-91
Identities = 159/310 (51%), Positives = 222/310 (71%), Gaps = 18/310 (5%)
Frame = -2
Query: 876 LHPYFISDVAKVLNRICPGCKSVRR--RVKSASPTSTHHRPVPCKYCDVHLKNKYPRMNF 703
LHPYF+S+V ++LN+ICPGCKSVR+ R+K A+ S ++ CKYC + + YP MNF
Sbjct: 85 LHPYFLSEVVQILNKICPGCKSVRKDLRIKGANSVSKVNQRKGCKYCVGNSIDWYPPMNF 144
Query: 702 KVSTKEIFGRTAIFAQINERLWIK-----SLSLASDYWDFIPNDPQQEENSLQPNKRVLS 538
K+S+K++F ++AI +++E+ +K +L SDYWDFIP D QQEE+ ++PN+RVLS
Sbjct: 145 KISSKDLFRKSAIIVEVSEKSSMKVRKRGKQALPSDYWDFIPKDEQQEESLIRPNRRVLS 204
Query: 537 HLQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVNEF------GQHMRFDERT 376
H QV +LLKDVDP +K FV + +S+FL+ FPVTPNSHRV E GQ + FD+RT
Sbjct: 205 HSQVRYLLKDVDPEFIKKFVL-SMDSIFLNCFPVTPNSHRVTEIMHASSNGQRLIFDQRT 263
Query: 375 RAYRKLVDFRGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQ-NEDAAPKMSGLKY 199
R Y+KL DFRG ANELS+ VL+CLKISKL EK S++ A + + N+D+A MSGL+Y
Sbjct: 264 RVYKKLADFRGIANELSSHVLECLKISKLHLEKPSNEESALVLAQKRNKDSASNMSGLRY 323
Query: 198 IKELILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRNWTTL----GVR 31
+K++ILGKR DH FRMV+ G+PN+K+ EI +P H+AE +Q++E+LN+ N L +R
Sbjct: 324 MKDVILGKRNDHCFRMVLTGNPNLKLSEISIPCHVAERLQIAEQLNNWNEERLKACCDLR 383
Query: 30 ILAKGRTFIR 1
+L KG +R
Sbjct: 384 LLEKGEIHVR 393
>XP_018820497.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Juglans regia]
Length = 1544
Score = 305 bits (782), Expect = 3e-91
Identities = 167/310 (53%), Positives = 212/310 (68%), Gaps = 18/310 (5%)
Frame = -2
Query: 876 LHPYFISDVAKVLNRICPGCKSVRR--RVKSASPTSTHHRPVPCKYCDVHLKNKYPRMNF 703
LHPYF+S+VAK+LN+ICPGCKSVR+ +VK +H + CKYC + YP + F
Sbjct: 151 LHPYFLSEVAKILNKICPGCKSVRQELKVKDGDSVRSHRQSKSCKYCAGNSVEWYPTVKF 210
Query: 702 KVSTKEIFGRTAIFAQINERL----WIKSL-SLASDYWDFIPNDPQQEENSLQPNKRVLS 538
KVS+ E+F AI +INE+L KS L++D+WDFIP D QQEEN L+PN+RVLS
Sbjct: 211 KVSSTEVFRNCAIIVEINEKLKNNVQKKSFRGLSADFWDFIPKDEQQEENCLKPNRRVLS 270
Query: 537 HLQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVNEF------GQHMRFDERT 376
H QV +LL DVDP+L+K FV S+FL+ FPVTPN HRV E GQ + FD+RT
Sbjct: 271 HAQVRYLLNDVDPKLIKKFVL-RIESLFLNCFPVTPNCHRVTEVTHAFSNGQRLVFDDRT 329
Query: 375 RAYRKLVDFRGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQNEDAAPKMS-GLKY 199
RAY+KLVDFRG ANEL +RVLDCLKISKL SEK K Q + A P +S GL++
Sbjct: 330 RAYKKLVDFRGIANELGSRVLDCLKISKLSSEKLPDKFLVSVQ--QKKGADPSISSGLRW 387
Query: 198 IKELILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRNWTTLG----VR 31
IK+++LGKR DH FRMVVVGDP+IK+ EIG+P HIAE +Q+SE LN N+ L +
Sbjct: 388 IKDVVLGKRNDHCFRMVVVGDPHIKLSEIGIPCHIAERLQISESLNRWNFDKLSDCCRLC 447
Query: 30 ILAKGRTFIR 1
+ KG ++R
Sbjct: 448 FIEKGEVYVR 457
>XP_011081158.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Sesamum
indicum]
Length = 1408
Score = 303 bits (777), Expect = 9e-91
Identities = 162/284 (57%), Positives = 202/284 (71%), Gaps = 5/284 (1%)
Frame = -2
Query: 876 LHPYFISDVAKVLNRICPGCKSVRR-RVKSASPTSTHHRPVPCKYCDVHLKNKYPRMNFK 700
L+PYF+S+VA++LN+ICPGCKSVR +VK TS HH P C+YC K+ YP+M FK
Sbjct: 49 LNPYFMSEVAQILNKICPGCKSVRHAKVKKVDSTSRHHPPRSCRYCAGRPKDGYPKMKFK 108
Query: 699 VSTKEIFGRTAIFAQINERLWIKSL--SLASDYWDFIPNDPQQEENSLQPNKRVLSHLQV 526
VS+K++F +TAI A++NE L K+ LA DYWD IP D QE + L NKRVL QV
Sbjct: 109 VSSKDVFAKTAIIAEVNETLLNKNSVRGLAPDYWDVIPKDSAQEFSGLPANKRVLLPAQV 168
Query: 525 YHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVNEFGQHMRFDERTRAYRKLVDFR 346
Y +LK V PR+L+ ++ KNS+FL+S VTPNSHRV EFGQ + DE T+ YRKL+DFR
Sbjct: 169 YSILKHVCPRVLEALLK-RKNSIFLNSLLVTPNSHRVREFGQRITVDETTKMYRKLIDFR 227
Query: 345 GSANELSTRVLDCLKISKLRSEKSSS--KAYAPKMFIQNEDAAPKMSGLKYIKELILGKR 172
G+ NELS RVLD K+SK+RSEK SS K Y + D+A SGLK IKEL+LGKR
Sbjct: 228 GTPNELSARVLDRYKVSKIRSEKLSSLEKIYEKQ---STNDSASSASGLKNIKELLLGKR 284
Query: 171 TDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRNWTTL 40
TDH+FRMVVVGDP IKVDEIG+P IAE + +S+ +N NW L
Sbjct: 285 TDHSFRMVVVGDPRIKVDEIGLPFQIAENVLISDHINLWNWDRL 328