BLASTX nr result

ID: Panax24_contig00039837 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00039837
         (435 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAN82155.1 hypothetical protein VITISV_033256 [Vitis vinifera]         58   3e-07
AAC00528.1 ORF379 (mitochondrion) [Petunia sp.]                        55   3e-06
AAA96602.1 CMS-associated fusion protein (mitochondrion) [Petuni...    55   3e-06

>CAN82155.1 hypothetical protein VITISV_033256 [Vitis vinifera]
          Length = 366

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 30/62 (48%), Positives = 42/62 (67%)
 Frame = -3

Query: 433 KIEPKSNFVNKLVEDLHLQESDPTRLKKLNAIMNALLQCRGIQNPSHAANLLKASIKEWD 254
           KIEPK NFV +L +DL ++ +D  +L KL  IM+ L +C  I++ S AA  LKAS+ EW+
Sbjct: 303 KIEPKFNFVAQLADDLQIKNADLHKLSKLKEIMDTLREC-DIKSGSEAAKHLKASLSEWE 361

Query: 253 AN 248
            N
Sbjct: 362 KN 363


>AAC00528.1 ORF379 (mitochondrion) [Petunia sp.]
          Length = 379

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 26/62 (41%), Positives = 38/62 (61%)
 Frame = -3

Query: 433 KIEPKSNFVNKLVEDLHLQESDPTRLKKLNAIMNALLQCRGIQNPSHAANLLKASIKEWD 254
           KIEPK+NFV K  EDL +  +DP RL KL  ++N  +Q   +++       LKA++ EW+
Sbjct: 315 KIEPKANFVTKAGEDLGIDTADPVRLDKLVRVLNTYIQLAPLESGRKVLQNLKATMAEWE 374

Query: 253 AN 248
            N
Sbjct: 375 KN 376


>AAA96602.1 CMS-associated fusion protein (mitochondrion) [Petunia axillaris
           subsp. parodii]
          Length = 402

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 26/62 (41%), Positives = 38/62 (61%)
 Frame = -3

Query: 433 KIEPKSNFVNKLVEDLHLQESDPTRLKKLNAIMNALLQCRGIQNPSHAANLLKASIKEWD 254
           KIEPK+NFV K  EDL +  +DP RL KL  ++N  +Q   +++       LKA++ EW+
Sbjct: 338 KIEPKANFVTKAGEDLGIDTADPVRLDKLVRVLNTYIQLAPLESGRKVLQNLKATMAEWE 397

Query: 253 AN 248
            N
Sbjct: 398 KN 399


Top