BLASTX nr result
ID: Panax24_contig00039511
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00039511
(442 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YP_717113.1 hypothetical protein BrnapMp014 [Brassica napus] YP_... 64 3e-10
YP_004927583.1 orf170 (mitochondrion) [Brassica carinata] YP_009... 64 6e-10
AGY62833.1 orf167 (mitochondrion) [Eruca vesicaria subsp. sativa] 64 6e-10
ALI90361.1 PsaA, partial (chloroplast) [Pleurisanthes flava] 58 7e-10
XP_013443687.1 photosystem I P700 chlorophyll A apoprotein A2 [M... 58 1e-09
ADD63105.1 photosystem I P700 apoprotein A1 (chloroplast) [Micro... 58 1e-09
ADD63038.1 photosystem I P700 apoprotein A1 (chloroplast) [Potam... 58 1e-09
ADD62970.1 photosystem I P700 apoprotein A1 (chloroplast) [Oryza... 58 1e-09
AAS46055.1 photosystem I P700 chlorophyll A apoprotein A1 (chlor... 58 1e-09
AFU96283.1 PsaA, partial (chloroplast) [Hypericum perforatum] 58 1e-09
AFU96281.1 PsaA, partial (chloroplast) [Hypericum fraseri] 58 1e-09
AFU96279.1 PsaA, partial (chloroplast) [Galearia maingayi] 58 1e-09
YP_009155541.1 photosystem I P700 chlorophyll a apoprotein A1 (c... 58 1e-09
YP_009135193.1 photosystem I P700 chlorophyll a apoprotein A1 (p... 58 1e-09
P04966.1 RecName: Full=Photosystem I P700 chlorophyll a apoprote... 58 1e-09
YP_002364501.1 photosystem I P700 apoprotein A1 (chloroplast) [F... 58 1e-09
YP_008080504.1 photosystem I protein A (chloroplast) [Pharus lat... 58 1e-09
AOR40828.1 photosystem I protein A (chloroplast) [Leptaspis bank... 58 1e-09
APU52511.1 photosystem I P700 chlorophyll a apoprotein A1 (chlor... 58 1e-09
APU52429.1 photosystem I P700 chlorophyll a apoprotein A1 (chlor... 58 1e-09
>YP_717113.1 hypothetical protein BrnapMp014 [Brassica napus] YP_004927479.1
orf113b (mitochondrion) [Brassica oleracea]
YP_004927832.1 orf113b (mitochondrion) [Brassica rapa
subsp. oleifera] YP_004927735.1 orf113b (mitochondrion)
[Brassica juncea] BAC98861.1 hypothetical protein
(mitochondrion) [Brassica napus] AEH43408.1 orf113b
(mitochondrion) [Brassica rapa subsp. oleifera]
AEH43507.1 orf113b (mitochondrion) [Brassica oleracea]
AEH43634.1 orf113b (mitochondrion) [Brassica juncea]
CBX48333.1 unnamed protein product [Brassica napus]
AHY20312.1 hypothetical protein (mitochondrion)
(mitochondrion) [Brassica juncea var. tumida] AKD00172.1
hypothetical protein (mitochondrion) [Brassica napus]
Length = 113
Score = 63.5 bits (153), Expect = 3e-10
Identities = 30/37 (81%), Positives = 32/37 (86%), Gaps = 2/37 (5%)
Frame = -1
Query: 157 IWKPLLEK--SAHFGRLSIIFLWLSSMYFHGARFSNY 53
IW+ LEK SAHFG+LSIIFLWLS MYFHGARFSNY
Sbjct: 8 IWRKSLEKVFSAHFGQLSIIFLWLSGMYFHGARFSNY 44
>YP_004927583.1 orf170 (mitochondrion) [Brassica carinata] YP_009320224.1 orf170
(mitochondrion) [Sinapis arvensis] AEH43598.1 orf170
(mitochondrion) [Brassica carinata] AGC81687.1
hypothetical protein DCGMS_00270 (mitochondrion)
[Raphanus sativus] AIE42567.1 hypothetical protein
RadishMT_p036 (mitochondrion) [Raphanus sativus]
AJR33075.1 orf170 (mitochondrion) [Sinapis arvensis]
Length = 170
Score = 63.5 bits (153), Expect(2) = 6e-10
Identities = 30/37 (81%), Positives = 32/37 (86%), Gaps = 2/37 (5%)
Frame = -1
Query: 157 IWKPLLEK--SAHFGRLSIIFLWLSSMYFHGARFSNY 53
IW+ LEK SAHFG+LSIIFLWLS MYFHGARFSNY
Sbjct: 8 IWRKSLEKVFSAHFGQLSIIFLWLSGMYFHGARFSNY 44
Score = 27.3 bits (59), Expect(2) = 6e-10
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -2
Query: 48 HYEAWLSGSTHIGPSA 1
+YEA LS THIGPSA
Sbjct: 43 NYEACLSDPTHIGPSA 58
>AGY62833.1 orf167 (mitochondrion) [Eruca vesicaria subsp. sativa]
Length = 167
Score = 63.5 bits (153), Expect(2) = 6e-10
Identities = 30/37 (81%), Positives = 32/37 (86%), Gaps = 2/37 (5%)
Frame = -1
Query: 157 IWKPLLEK--SAHFGRLSIIFLWLSSMYFHGARFSNY 53
IW+ LEK SAHFG+LSIIFLWLS MYFHGARFSNY
Sbjct: 8 IWRKSLEKVFSAHFGQLSIIFLWLSGMYFHGARFSNY 44
Score = 27.3 bits (59), Expect(2) = 6e-10
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -2
Query: 48 HYEAWLSGSTHIGPSA 1
+YEA LS THIGPSA
Sbjct: 43 NYEACLSDPTHIGPSA 58
>ALI90361.1 PsaA, partial (chloroplast) [Pleurisanthes flava]
Length = 743
Score = 58.2 bits (139), Expect(2) = 7e-10
Identities = 28/40 (70%), Positives = 32/40 (80%), Gaps = 2/40 (5%)
Frame = -1
Query: 166 HTNIWKPLLEK--SAHFGRLSIIFLWLSSMYFHGARFSNY 53
HT+ + + K SAHFG+LSIIFLWLS MYFHGARFSNY
Sbjct: 57 HTSDLEEISRKVFSAHFGQLSIIFLWLSGMYFHGARFSNY 96
Score = 32.3 bits (72), Expect(2) = 7e-10
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2
Query: 48 HYEAWLSGSTHIGPSA 1
+YEAWLS THIGPSA
Sbjct: 95 NYEAWLSDPTHIGPSA 110
>XP_013443687.1 photosystem I P700 chlorophyll A apoprotein A2 [Medicago
truncatula] KEH17712.1 photosystem I P700 chlorophyll A
apoprotein A2 [Medicago truncatula]
Length = 1438
Score = 57.8 bits (138), Expect(2) = 1e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = -1
Query: 133 SAHFGRLSIIFLWLSSMYFHGARFSNY 53
SAHFG+LSIIFLWLS MYFHGARFSNY
Sbjct: 72 SAHFGQLSIIFLWLSGMYFHGARFSNY 98
Score = 32.3 bits (72), Expect(2) = 1e-09
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2
Query: 48 HYEAWLSGSTHIGPSA 1
+YEAWLS THIGPSA
Sbjct: 97 NYEAWLSDPTHIGPSA 112
>ADD63105.1 photosystem I P700 apoprotein A1 (chloroplast) [Microlaena
stipoides]
Length = 765
Score = 57.8 bits (138), Expect(2) = 1e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = -1
Query: 133 SAHFGRLSIIFLWLSSMYFHGARFSNY 53
SAHFG+LSIIFLWLS MYFHGARFSNY
Sbjct: 87 SAHFGQLSIIFLWLSGMYFHGARFSNY 113
Score = 32.3 bits (72), Expect(2) = 1e-09
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2
Query: 48 HYEAWLSGSTHIGPSA 1
+YEAWLS THIGPSA
Sbjct: 112 NYEAWLSDPTHIGPSA 127
>ADD63038.1 photosystem I P700 apoprotein A1 (chloroplast) [Potamophila
parviflora]
Length = 765
Score = 57.8 bits (138), Expect(2) = 1e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = -1
Query: 133 SAHFGRLSIIFLWLSSMYFHGARFSNY 53
SAHFG+LSIIFLWLS MYFHGARFSNY
Sbjct: 87 SAHFGQLSIIFLWLSGMYFHGARFSNY 113
Score = 32.3 bits (72), Expect(2) = 1e-09
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2
Query: 48 HYEAWLSGSTHIGPSA 1
+YEAWLS THIGPSA
Sbjct: 112 NYEAWLSDPTHIGPSA 127
>ADD62970.1 photosystem I P700 apoprotein A1 (chloroplast) [Oryza
australiensis]
Length = 765
Score = 57.8 bits (138), Expect(2) = 1e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = -1
Query: 133 SAHFGRLSIIFLWLSSMYFHGARFSNY 53
SAHFG+LSIIFLWLS MYFHGARFSNY
Sbjct: 87 SAHFGQLSIIFLWLSGMYFHGARFSNY 113
Score = 32.3 bits (72), Expect(2) = 1e-09
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2
Query: 48 HYEAWLSGSTHIGPSA 1
+YEAWLS THIGPSA
Sbjct: 112 NYEAWLSDPTHIGPSA 127
>AAS46055.1 photosystem I P700 chlorophyll A apoprotein A1 (chloroplast) [Oryza
sativa Indica Group] AAS46121.1 photosystem I P700
chlorophyll A apoprotein A1 (chloroplast) [Oryza sativa
Japonica Group] AAS46184.1 photosystem I P700
chlorophyll A apoprotein A1 (chloroplast) [Oryza sativa
Japonica Group] ADD62834.1 photosystem I P700 apoprotein
A1 (chloroplast) [Oryza sativa Japonica Group]
ADD62902.1 photosystem I P700 apoprotein A1
(chloroplast) [Oryza meridionalis]
Length = 765
Score = 57.8 bits (138), Expect(2) = 1e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = -1
Query: 133 SAHFGRLSIIFLWLSSMYFHGARFSNY 53
SAHFG+LSIIFLWLS MYFHGARFSNY
Sbjct: 87 SAHFGQLSIIFLWLSGMYFHGARFSNY 113
Score = 32.3 bits (72), Expect(2) = 1e-09
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2
Query: 48 HYEAWLSGSTHIGPSA 1
+YEAWLS THIGPSA
Sbjct: 112 NYEAWLSDPTHIGPSA 127
>AFU96283.1 PsaA, partial (chloroplast) [Hypericum perforatum]
Length = 758
Score = 57.8 bits (138), Expect(2) = 1e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = -1
Query: 133 SAHFGRLSIIFLWLSSMYFHGARFSNY 53
SAHFG+LSIIFLWLS MYFHGARFSNY
Sbjct: 80 SAHFGQLSIIFLWLSGMYFHGARFSNY 106
Score = 32.3 bits (72), Expect(2) = 1e-09
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2
Query: 48 HYEAWLSGSTHIGPSA 1
+YEAWLS THIGPSA
Sbjct: 105 NYEAWLSDPTHIGPSA 120
>AFU96281.1 PsaA, partial (chloroplast) [Hypericum fraseri]
Length = 758
Score = 57.8 bits (138), Expect(2) = 1e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = -1
Query: 133 SAHFGRLSIIFLWLSSMYFHGARFSNY 53
SAHFG+LSIIFLWLS MYFHGARFSNY
Sbjct: 80 SAHFGQLSIIFLWLSGMYFHGARFSNY 106
Score = 32.3 bits (72), Expect(2) = 1e-09
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2
Query: 48 HYEAWLSGSTHIGPSA 1
+YEAWLS THIGPSA
Sbjct: 105 NYEAWLSDPTHIGPSA 120
>AFU96279.1 PsaA, partial (chloroplast) [Galearia maingayi]
Length = 758
Score = 57.8 bits (138), Expect(2) = 1e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = -1
Query: 133 SAHFGRLSIIFLWLSSMYFHGARFSNY 53
SAHFG+LSIIFLWLS MYFHGARFSNY
Sbjct: 80 SAHFGQLSIIFLWLSGMYFHGARFSNY 106
Score = 32.3 bits (72), Expect(2) = 1e-09
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2
Query: 48 HYEAWLSGSTHIGPSA 1
+YEAWLS THIGPSA
Sbjct: 105 NYEAWLSDPTHIGPSA 120
>YP_009155541.1 photosystem I P700 chlorophyll a apoprotein A1 (chloroplast) [Oryza
barthii] AJP33605.1 photosystem I P700 chlorophyll a
apoprotein A1 (chloroplast) [Oryza barthii]
Length = 755
Score = 57.8 bits (138), Expect(2) = 1e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = -1
Query: 133 SAHFGRLSIIFLWLSSMYFHGARFSNY 53
SAHFG+LSIIFLWLS MYFHGARFSNY
Sbjct: 77 SAHFGQLSIIFLWLSGMYFHGARFSNY 103
Score = 32.3 bits (72), Expect(2) = 1e-09
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2
Query: 48 HYEAWLSGSTHIGPSA 1
+YEAWLS THIGPSA
Sbjct: 102 NYEAWLSDPTHIGPSA 117
>YP_009135193.1 photosystem I P700 chlorophyll a apoprotein A1 (plastid) [Hickelia
madagascariensis] AIM53364.1 photosystem I P700
chlorophyll a apoprotein A1 (plastid) [Hickelia
madagascariensis]
Length = 752
Score = 57.8 bits (138), Expect(2) = 1e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = -1
Query: 133 SAHFGRLSIIFLWLSSMYFHGARFSNY 53
SAHFG+LSIIFLWLS MYFHGARFSNY
Sbjct: 72 SAHFGQLSIIFLWLSGMYFHGARFSNY 98
Score = 32.3 bits (72), Expect(2) = 1e-09
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2
Query: 48 HYEAWLSGSTHIGPSA 1
+YEAWLS THIGPSA
Sbjct: 97 NYEAWLSDPTHIGPSA 112
>P04966.1 RecName: Full=Photosystem I P700 chlorophyll a apoprotein A1;
AltName: Full=PSI-A; AltName: Full=PsaA AAA84485.1 P700
chlorophyll a-protein PSI-A1 (chloroplast) [Zea mays]
Length = 751
Score = 57.8 bits (138), Expect(2) = 1e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = -1
Query: 133 SAHFGRLSIIFLWLSSMYFHGARFSNY 53
SAHFG+LSIIFLWLS MYFHGARFSNY
Sbjct: 73 SAHFGQLSIIFLWLSGMYFHGARFSNY 99
Score = 32.3 bits (72), Expect(2) = 1e-09
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2
Query: 48 HYEAWLSGSTHIGPSA 1
+YEAWLS THIGPSA
Sbjct: 98 NYEAWLSDPTHIGPSA 113
>YP_002364501.1 photosystem I P700 apoprotein A1 (chloroplast) [Festuca
arundinacea] ACJ70758.1 photosystem I P700 apoprotein A1
(chloroplast) [Festuca arundinacea]
Length = 751
Score = 57.8 bits (138), Expect(2) = 1e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = -1
Query: 133 SAHFGRLSIIFLWLSSMYFHGARFSNY 53
SAHFG+LSIIFLWLS MYFHGARFSNY
Sbjct: 72 SAHFGQLSIIFLWLSGMYFHGARFSNY 98
Score = 32.3 bits (72), Expect(2) = 1e-09
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2
Query: 48 HYEAWLSGSTHIGPSA 1
+YEAWLS THIGPSA
Sbjct: 97 NYEAWLSDPTHIGPSA 112
>YP_008080504.1 photosystem I protein A (chloroplast) [Pharus latifolius]
AEI29091.1 photosystem I protein A (chloroplast) [Pharus
latifolius]
Length = 751
Score = 57.8 bits (138), Expect(2) = 1e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = -1
Query: 133 SAHFGRLSIIFLWLSSMYFHGARFSNY 53
SAHFG+LSIIFLWLS MYFHGARFSNY
Sbjct: 72 SAHFGQLSIIFLWLSGMYFHGARFSNY 98
Score = 32.3 bits (72), Expect(2) = 1e-09
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2
Query: 48 HYEAWLSGSTHIGPSA 1
+YEAWLS THIGPSA
Sbjct: 97 NYEAWLSDPTHIGPSA 112
>AOR40828.1 photosystem I protein A (chloroplast) [Leptaspis banksii]
AOR40903.1 photosystem I protein A (chloroplast)
[Leptaspis zeylanica]
Length = 750
Score = 57.8 bits (138), Expect(2) = 1e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = -1
Query: 133 SAHFGRLSIIFLWLSSMYFHGARFSNY 53
SAHFG+LSIIFLWLS MYFHGARFSNY
Sbjct: 72 SAHFGQLSIIFLWLSGMYFHGARFSNY 98
Score = 32.3 bits (72), Expect(2) = 1e-09
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2
Query: 48 HYEAWLSGSTHIGPSA 1
+YEAWLS THIGPSA
Sbjct: 97 NYEAWLSDPTHIGPSA 112
>APU52511.1 photosystem I P700 chlorophyll a apoprotein A1 (chloroplast)
[Chasechloa madagascariensis]
Length = 750
Score = 57.8 bits (138), Expect(2) = 1e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = -1
Query: 133 SAHFGRLSIIFLWLSSMYFHGARFSNY 53
SAHFG+LSIIFLWLS MYFHGARFSNY
Sbjct: 72 SAHFGQLSIIFLWLSGMYFHGARFSNY 98
Score = 32.3 bits (72), Expect(2) = 1e-09
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2
Query: 48 HYEAWLSGSTHIGPSA 1
+YEAWLS THIGPSA
Sbjct: 97 NYEAWLSDPTHIGPSA 112
>APU52429.1 photosystem I P700 chlorophyll a apoprotein A1 (chloroplast)
[Brachiaria fragrans]
Length = 750
Score = 57.8 bits (138), Expect(2) = 1e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = -1
Query: 133 SAHFGRLSIIFLWLSSMYFHGARFSNY 53
SAHFG+LSIIFLWLS MYFHGARFSNY
Sbjct: 72 SAHFGQLSIIFLWLSGMYFHGARFSNY 98
Score = 32.3 bits (72), Expect(2) = 1e-09
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2
Query: 48 HYEAWLSGSTHIGPSA 1
+YEAWLS THIGPSA
Sbjct: 97 NYEAWLSDPTHIGPSA 112