BLASTX nr result
ID: Panax24_contig00039446
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00039446
(412 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CDP05736.1 unnamed protein product [Coffea canephora] 70 1e-12
XP_017249855.1 PREDICTED: heterodimeric geranylgeranyl pyrophosp... 72 2e-12
XP_018811644.1 PREDICTED: heterodimeric geranylgeranyl pyrophosp... 69 2e-11
AGL91646.1 geranyl diphosphate synthase [Catharanthus roseus] 69 2e-11
AKJ26303.1 chloroplast heterodimeric geranylgeranyl pyrophosphat... 67 2e-10
XP_015899572.1 PREDICTED: heterodimeric geranylgeranyl pyrophosp... 62 8e-09
XP_019231006.1 PREDICTED: heterodimeric geranylgeranyl pyrophosp... 58 3e-07
OIT29044.1 heterodimeric geranylgeranyl pyrophosphate synthase s... 58 3e-07
XP_009586873.1 PREDICTED: heterodimeric geranylgeranyl pyrophosp... 56 1e-06
XP_010089993.1 Heterodimeric geranylgeranyl pyrophosphate syntha... 56 1e-06
XP_010089991.1 Heterodimeric geranylgeranyl pyrophosphate syntha... 56 1e-06
XP_016455366.1 PREDICTED: heterodimeric geranylgeranyl pyrophosp... 56 1e-06
XP_011095406.1 PREDICTED: heterodimeric geranylgeranyl pyrophosp... 55 4e-06
>CDP05736.1 unnamed protein product [Coffea canephora]
Length = 131
Score = 69.7 bits (169), Expect = 1e-12
Identities = 31/54 (57%), Positives = 43/54 (79%)
Frame = +1
Query: 1 RKFGVYVGMIQGMVHGVGKNKEGRNEVVEKLRGMALKELEIFSGRKVEQISSLV 162
R +G+Y G IQGM+HG+G+N++G E+VE LR +ALKE+E F R++E ISSLV
Sbjct: 71 RSYGLYAGTIQGMLHGIGRNQKGVREMVENLRALALKEVESFKKREIEAISSLV 124
>XP_017249855.1 PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Daucus carota subsp.
sativus] KZM93465.1 hypothetical protein DCAR_016710
[Daucus carota subsp. sativus]
Length = 300
Score = 72.4 bits (176), Expect = 2e-12
Identities = 35/54 (64%), Positives = 42/54 (77%)
Frame = +1
Query: 1 RKFGVYVGMIQGMVHGVGKNKEGRNEVVEKLRGMALKELEIFSGRKVEQISSLV 162
RK+G+YVGMIQGMV+GVGK R E+ K RG+A+KELE F GR V QISSL+
Sbjct: 244 RKYGLYVGMIQGMVNGVGKKLGSRLEIANKWRGLAIKELEAFHGRNVHQISSLL 297
>XP_018811644.1 PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Juglans regia]
Length = 299
Score = 69.3 bits (168), Expect = 2e-11
Identities = 33/54 (61%), Positives = 43/54 (79%)
Frame = +1
Query: 1 RKFGVYVGMIQGMVHGVGKNKEGRNEVVEKLRGMALKELEIFSGRKVEQISSLV 162
R+FG+YVGMI+GM HG+GK ++G VVE+LR +AL+ELE F G K+E ISS V
Sbjct: 244 RRFGLYVGMIRGMSHGIGKKEKGLVRVVEELRNLALQELEEFEGGKLEAISSFV 297
>AGL91646.1 geranyl diphosphate synthase [Catharanthus roseus]
Length = 299
Score = 69.3 bits (168), Expect = 2e-11
Identities = 32/54 (59%), Positives = 43/54 (79%)
Frame = +1
Query: 1 RKFGVYVGMIQGMVHGVGKNKEGRNEVVEKLRGMALKELEIFSGRKVEQISSLV 162
RKFG+Y GMIQG+VHGVGKN+E E+V KLR +A++EL+ RK++ ISSL+
Sbjct: 239 RKFGLYAGMIQGLVHGVGKNREEIQELVRKLRYLAMEELKSLKNRKIDTISSLL 292
>AKJ26303.1 chloroplast heterodimeric geranylgeranyl pyrophosphate synthase
small subunit [Paeonia lactiflora]
Length = 298
Score = 66.6 bits (161), Expect = 2e-10
Identities = 33/54 (61%), Positives = 42/54 (77%)
Frame = +1
Query: 1 RKFGVYVGMIQGMVHGVGKNKEGRNEVVEKLRGMALKELEIFSGRKVEQISSLV 162
RK+G YVGMIQGM++GVG+N +G +VV LR +ALKEL+ F KVE+IS LV
Sbjct: 238 RKYGFYVGMIQGMLYGVGRNTKGSMDVVIGLRDLALKELKYFDQAKVEKISGLV 291
>XP_015899572.1 PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Ziziphus jujuba]
Length = 303
Score = 62.4 bits (150), Expect = 8e-09
Identities = 31/55 (56%), Positives = 41/55 (74%)
Frame = +1
Query: 1 RKFGVYVGMIQGMVHGVGKNKEGRNEVVEKLRGMALKELEIFSGRKVEQISSLVI 165
RK+G+YVGM QG ++ VGK ++ VVE+LR +ALKEL+ F G KVE ISS V+
Sbjct: 247 RKYGLYVGMRQGYLNRVGKKEKELERVVEELRNLALKELQHFEGGKVEAISSFVV 301
>XP_019231006.1 PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Nicotiana attenuata]
Length = 270
Score = 57.8 bits (138), Expect = 3e-07
Identities = 29/55 (52%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
Frame = +1
Query: 1 RKFGVYVGMIQGMVHGVGKNKEGRNEVVEKLRGMALKELEI-FSGRKVEQISSLV 162
R +G+YVG IQGM++GVG+N +N+ +E+LR +A+KEL+I F G+KV I+SL+
Sbjct: 205 RNYGLYVGTIQGMINGVGRN--NKNKRMEELRILAMKELQIRFKGKKVSPIASLI 257
>OIT29044.1 heterodimeric geranylgeranyl pyrophosphate synthase small subunit,
chloroplastic [Nicotiana attenuata]
Length = 302
Score = 57.8 bits (138), Expect = 3e-07
Identities = 29/55 (52%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
Frame = +1
Query: 1 RKFGVYVGMIQGMVHGVGKNKEGRNEVVEKLRGMALKELEI-FSGRKVEQISSLV 162
R +G+YVG IQGM++GVG+N +N+ +E+LR +A+KEL+I F G+KV I+SL+
Sbjct: 237 RNYGLYVGTIQGMINGVGRN--NKNKRMEELRILAMKELQIRFKGKKVSPIASLI 289
>XP_009586873.1 PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Nicotiana
tomentosiformis]
Length = 269
Score = 56.2 bits (134), Expect = 1e-06
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Frame = +1
Query: 1 RKFGVYVGMIQGMVHGVGKNKEGRNEVVEKLRGMALKELEI-FSGRKVEQISSLV 162
R +GVYVG+IQGM++GVGKN + VE+LR A+KEL+ F G+KV I+SL+
Sbjct: 204 RNYGVYVGIIQGMINGVGKNNYKKR--VEELRIFAMKELQTHFKGKKVRPIASLI 256
>XP_010089993.1 Heterodimeric geranylgeranyl pyrophosphate synthase small subunit
[Morus notabilis] EXB38724.1 Heterodimeric
geranylgeranyl pyrophosphate synthase small subunit
[Morus notabilis]
Length = 306
Score = 56.2 bits (134), Expect = 1e-06
Identities = 27/55 (49%), Positives = 41/55 (74%)
Frame = +1
Query: 1 RKFGVYVGMIQGMVHGVGKNKEGRNEVVEKLRGMALKELEIFSGRKVEQISSLVI 165
RK+G+YVG++QG + +G+ + VVE LR +A+KEL+ F GRKVE+ISS ++
Sbjct: 251 RKYGLYVGIMQGYTNRLGRRVKELERVVE-LRNLAMKELDHFKGRKVEEISSFIV 304
>XP_010089991.1 Heterodimeric geranylgeranyl pyrophosphate synthase small subunit
[Morus notabilis] EXB38722.1 Heterodimeric
geranylgeranyl pyrophosphate synthase small subunit
[Morus notabilis]
Length = 306
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/55 (50%), Positives = 41/55 (74%)
Frame = +1
Query: 1 RKFGVYVGMIQGMVHGVGKNKEGRNEVVEKLRGMALKELEIFSGRKVEQISSLVI 165
RK+G+YVG+IQG + +G+ + VVE LR +ALKEL+ F G+KVE+ISS ++
Sbjct: 251 RKYGLYVGIIQGYTNRLGRKVKEIERVVE-LRNLALKELDHFKGQKVEEISSFIV 304
>XP_016455366.1 PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Nicotiana tabacum]
Length = 317
Score = 56.2 bits (134), Expect = 1e-06
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Frame = +1
Query: 1 RKFGVYVGMIQGMVHGVGKNKEGRNEVVEKLRGMALKELEI-FSGRKVEQISSLV 162
R +GVYVG+IQGM++GVGKN + VE+LR A+KEL+ F G+KV I+SL+
Sbjct: 252 RNYGVYVGIIQGMINGVGKNNYKKR--VEELRIFAMKELQTHFKGKKVRPIASLI 304
>XP_011095406.1 PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Sesamum indicum]
Length = 290
Score = 54.7 bits (130), Expect = 4e-06
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +1
Query: 1 RKFGVYVGMIQGMVHGVGKNKEG-RNEVVEKLRGMALKELEIFSGRKVEQISSLV 162
R+FG+Y GM+QG+ GKNK G E +EK + +ALKELE G+K E ISSLV
Sbjct: 229 RRFGLYAGMVQGIQ---GKNKAGFMEEKIEKFKELALKELESLQGKKTELISSLV 280