BLASTX nr result
ID: Panax24_contig00039230
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00039230
(495 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KVH94631.1 Pentatricopeptide repeat-containing protein [Cynara c... 60 4e-10
XP_006488325.1 PREDICTED: pentatricopeptide repeat-containing pr... 64 5e-09
XP_008223543.1 PREDICTED: pentatricopeptide repeat-containing pr... 64 5e-09
XP_008385220.1 PREDICTED: pentatricopeptide repeat-containing pr... 64 9e-09
XP_007206822.1 hypothetical protein PRUPE_ppa025990mg [Prunus pe... 63 1e-08
XP_006424825.1 hypothetical protein CICLE_v10028134mg [Citrus cl... 63 1e-08
XP_017253574.1 PREDICTED: pentatricopeptide repeat-containing pr... 51 2e-08
KZM95667.1 hypothetical protein DCAR_018909 [Daucus carota subsp... 51 2e-08
XP_011462134.1 PREDICTED: pentatricopeptide repeat-containing pr... 62 3e-08
XP_009353808.1 PREDICTED: pentatricopeptide repeat-containing pr... 61 8e-08
XP_019176770.1 PREDICTED: pentatricopeptide repeat-containing pr... 55 1e-07
XP_017984180.1 PREDICTED: pentatricopeptide repeat-containing pr... 60 1e-07
EOY18767.1 Tetratricopeptide repeat (TPR)-like superfamily prote... 60 1e-07
XP_002532856.1 PREDICTED: pentatricopeptide repeat-containing pr... 60 1e-07
CDP09054.1 unnamed protein product [Coffea canephora] 60 1e-07
XP_011657149.1 PREDICTED: pentatricopeptide repeat-containing pr... 57 4e-07
XP_011657148.1 PREDICTED: pentatricopeptide repeat-containing pr... 57 4e-07
XP_011089465.1 PREDICTED: pentatricopeptide repeat-containing pr... 58 7e-07
XP_012474842.1 PREDICTED: pentatricopeptide repeat-containing pr... 58 9e-07
XP_012075961.1 PREDICTED: pentatricopeptide repeat-containing pr... 58 9e-07
>KVH94631.1 Pentatricopeptide repeat-containing protein [Cynara cardunculus
var. scolymus]
Length = 572
Score = 60.5 bits (145), Expect(2) = 4e-10
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = -2
Query: 155 EKKKPRAIVGEFEKLPIGEPVGSALQSWMSDGFPIHRSDIF 33
E+++P+++ G E+L G PVGSA QSWM DGFPIHR DIF
Sbjct: 99 EEEEPKSLCGRIERLARGAPVGSAFQSWMGDGFPIHRGDIF 139
Score = 30.8 bits (68), Expect(2) = 4e-10
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -1
Query: 276 ERKFFGAIRRTLPISWTIHS*LN---FNFCT*AANSSLVESSAREE 148
ER+FF A RRTL S + LN F FCT A ++S +EE
Sbjct: 34 ERQFFQAFRRTLSTSSPTQTLLNSRTFRFCTQATDTSESIQVGKEE 79
>XP_006488325.1 PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial [Citrus sinensis]
Length = 521
Score = 64.3 bits (155), Expect = 5e-09
Identities = 28/59 (47%), Positives = 40/59 (67%)
Frame = -2
Query: 203 TSVPKQLIARLWKVQPEKKKPRAIVGEFEKLPIGEPVGSALQSWMSDGFPIHRSDIFHN 27
T P +L+ ++P +KP+ + E+LP GEPVGSA QSWM +GFP+HR +IFH+
Sbjct: 33 TQPPNKLLTS--NIEPGLEKPKCLSLRIERLPRGEPVGSAFQSWMREGFPVHRGEIFHS 89
>XP_008223543.1 PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial [Prunus mume]
Length = 528
Score = 64.3 bits (155), Expect = 5e-09
Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Frame = -2
Query: 254 FVEHFPSPGLSTHD*--ISTSVPKQLIARLWKVQPEKKKPRAIVG-EFEKLPIGEPVGSA 84
+V +FP+ +S+ + T P ++ + ++++PR+ + EKLP GEPVGSA
Sbjct: 21 YVPYFPANKISSSFKFFLCTQTPNDFTEKV--SESKREEPRSCLSYRIEKLPNGEPVGSA 78
Query: 83 LQSWMSDGFPIHRSDIFH 30
QSWM DGFPIHR DIFH
Sbjct: 79 FQSWMGDGFPIHRGDIFH 96
>XP_008385220.1 PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial [Malus domestica]
Length = 528
Score = 63.5 bits (153), Expect = 9e-09
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -2
Query: 164 VQPEKKKPRAIVG-EFEKLPIGEPVGSALQSWMSDGFPIHRSDIFH 30
V+ ++ +PR+ + EKLP GEPVGSA QSWM DGFPIHR D+FH
Sbjct: 51 VESKQAEPRSCLSYRIEKLPSGEPVGSAFQSWMGDGFPIHRGDVFH 96
>XP_007206822.1 hypothetical protein PRUPE_ppa025990mg [Prunus persica] ONI00238.1
hypothetical protein PRUPE_6G077700 [Prunus persica]
Length = 528
Score = 63.2 bits (152), Expect = 1e-08
Identities = 28/45 (62%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = -2
Query: 161 QPEKKKPRAIVG-EFEKLPIGEPVGSALQSWMSDGFPIHRSDIFH 30
+ ++++PR+ + EKLP GEPVGSA QSWM DGFPIHR DIFH
Sbjct: 52 ESKREEPRSCLSYRIEKLPNGEPVGSAFQSWMGDGFPIHRGDIFH 96
>XP_006424825.1 hypothetical protein CICLE_v10028134mg [Citrus clementina]
ESR38065.1 hypothetical protein CICLE_v10028134mg
[Citrus clementina]
Length = 546
Score = 63.2 bits (152), Expect = 1e-08
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = -2
Query: 164 VQPEKKKPRAIVGEFEKLPIGEPVGSALQSWMSDGFPIHRSDIFHN 27
++P +KP+ + E+LP GEPVGSA QSWM +GFP+HR +IFH+
Sbjct: 69 IEPGLEKPKCLSLRIERLPRGEPVGSAFQSWMREGFPVHRGEIFHS 114
>XP_017253574.1 PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Daucus carota subsp. sativus]
XP_017253575.1 PREDICTED: pentatricopeptide
repeat-containing protein At1g07590, mitochondrial-like
[Daucus carota subsp. sativus] XP_017253576.1 PREDICTED:
pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Daucus carota subsp. sativus]
Length = 522
Score = 51.2 bits (121), Expect(2) = 2e-08
Identities = 22/30 (73%), Positives = 24/30 (80%)
Frame = -2
Query: 119 EKLPIGEPVGSALQSWMSDGFPIHRSDIFH 30
EKLP EPV SA QSWM DGFP+HR DIF+
Sbjct: 61 EKLPNEEPVCSAFQSWMGDGFPVHRGDIFY 90
Score = 34.3 bits (77), Expect(2) = 2e-08
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -1
Query: 276 ERKFFGAIRRTLPISWTIH-S*LNFNFCT*AANSSLVESSAREEEAKGYCWRI*EATN 106
E+ F AIRRTL ISWT LN +FCT N++ +EE C RI + N
Sbjct: 9 EQIFSQAIRRTLLISWTSQLPQLNHSFCT-QPNTNSSSPELDDEEESNLCQRIEKLPN 65
>KZM95667.1 hypothetical protein DCAR_018909 [Daucus carota subsp. sativus]
Length = 521
Score = 51.2 bits (121), Expect(2) = 2e-08
Identities = 22/30 (73%), Positives = 24/30 (80%)
Frame = -2
Query: 119 EKLPIGEPVGSALQSWMSDGFPIHRSDIFH 30
EKLP EPV SA QSWM DGFP+HR DIF+
Sbjct: 60 EKLPNEEPVCSAFQSWMGDGFPVHRGDIFY 89
Score = 34.3 bits (77), Expect(2) = 2e-08
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -1
Query: 276 ERKFFGAIRRTLPISWTIH-S*LNFNFCT*AANSSLVESSAREEEAKGYCWRI*EATN 106
+ +F AIRRTL ISWT LN +FCT N++ +EE C RI + N
Sbjct: 8 DEEFPAAIRRTLLISWTSQLPQLNHSFCT-QPNTNSSSPELDDEEESNLCQRIEKLPN 64
>XP_011462134.1 PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial, partial [Fragaria vesca subsp. vesca]
Length = 474
Score = 62.0 bits (149), Expect = 3e-08
Identities = 28/42 (66%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Frame = -2
Query: 152 KKKPRAIVG-EFEKLPIGEPVGSALQSWMSDGFPIHRSDIFH 30
+++PR+ + EKLP GEPVGSA QSWM DGFPIHR DIFH
Sbjct: 1 QEEPRSCLSYRIEKLPRGEPVGSAFQSWMGDGFPIHRGDIFH 42
>XP_009353808.1 PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial [Pyrus x bretschneideri]
Length = 528
Score = 60.8 bits (146), Expect = 8e-08
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -2
Query: 164 VQPEKKKPRAIVGE-FEKLPIGEPVGSALQSWMSDGFPIHRSDIFH 30
V+ E+ +P + EKLP GEPVGSA QSWM DGFPIHR ++FH
Sbjct: 51 VESERAEPSPCLSHRIEKLPSGEPVGSAFQSWMGDGFPIHRGEVFH 96
>XP_019176770.1 PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial [Ipomoea nil]
Length = 533
Score = 55.1 bits (131), Expect(2) = 1e-07
Identities = 25/45 (55%), Positives = 28/45 (62%)
Frame = -2
Query: 164 VQPEKKKPRAIVGEFEKLPIGEPVGSALQSWMSDGFPIHRSDIFH 30
V E ++ EKLP GEP+GSA QSWM DGF IHR IFH
Sbjct: 56 VAEEDAGVNSLSSRIEKLPRGEPIGSAFQSWMGDGFSIHRGHIFH 100
Score = 28.1 bits (61), Expect(2) = 1e-07
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -1
Query: 273 RKFFGAIRRTLPISWT---IHS*LNFNFCT*AANSSLVESSARE 151
++F GAIRRT+ I+ H L F+FCT SSL S E
Sbjct: 12 QRFCGAIRRTIVIASPNPKFH--LRFSFCTQVPTSSLDSGSENE 53
>XP_017984180.1 PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial [Theobroma cacao]
Length = 519
Score = 60.1 bits (144), Expect = 1e-07
Identities = 24/44 (54%), Positives = 33/44 (75%)
Frame = -2
Query: 161 QPEKKKPRAIVGEFEKLPIGEPVGSALQSWMSDGFPIHRSDIFH 30
+P+ +P+ + E+LP GE VGSA +SWM+DGFP+HR DIFH
Sbjct: 44 EPKTDEPKCLSLRIERLPKGETVGSAFKSWMADGFPVHRGDIFH 87
>EOY18767.1 Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 519
Score = 60.1 bits (144), Expect = 1e-07
Identities = 24/44 (54%), Positives = 33/44 (75%)
Frame = -2
Query: 161 QPEKKKPRAIVGEFEKLPIGEPVGSALQSWMSDGFPIHRSDIFH 30
+P+ +P+ + E+LP GE VGSA +SWM+DGFP+HR DIFH
Sbjct: 44 EPKTDEPKCLSLRIERLPKGETVGSAFKSWMADGFPVHRGDIFH 87
>XP_002532856.1 PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial [Ricinus communis] EEF29534.1
pentatricopeptide repeat-containing protein, putative
[Ricinus communis]
Length = 521
Score = 60.1 bits (144), Expect = 1e-07
Identities = 23/49 (46%), Positives = 36/49 (73%)
Frame = -2
Query: 176 RLWKVQPEKKKPRAIVGEFEKLPIGEPVGSALQSWMSDGFPIHRSDIFH 30
++ + + +++ P+++ EKLP GEP+G A QSWM +GFPIHR D+FH
Sbjct: 41 KILEPEEQEENPKSLSLRIEKLPRGEPIGLAFQSWMREGFPIHRGDVFH 89
>CDP09054.1 unnamed protein product [Coffea canephora]
Length = 536
Score = 60.1 bits (144), Expect = 1e-07
Identities = 26/46 (56%), Positives = 33/46 (71%)
Frame = -2
Query: 167 KVQPEKKKPRAIVGEFEKLPIGEPVGSALQSWMSDGFPIHRSDIFH 30
+ + E+ + +++ EKLP GEPV SA QSWM DGFPIHR DIFH
Sbjct: 59 QAENEEGEAKSLSWRIEKLPRGEPVASAFQSWMRDGFPIHRGDIFH 104
>XP_011657149.1 PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial isoform X2 [Cucumis sativus]
Length = 145
Score = 56.6 bits (135), Expect = 4e-07
Identities = 26/60 (43%), Positives = 38/60 (63%)
Frame = -2
Query: 209 ISTSVPKQLIARLWKVQPEKKKPRAIVGEFEKLPIGEPVGSALQSWMSDGFPIHRSDIFH 30
+ T +P L + ++ E ++P+ + E++P GE VG A +SWM DGFPIHR DIFH
Sbjct: 37 LCTQIPGNLSPNV--LESELEEPKCLSLRIERIPKGELVGYAFRSWMGDGFPIHRGDIFH 94
>XP_011657148.1 PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial isoform X1 [Cucumis sativus]
Length = 153
Score = 56.6 bits (135), Expect = 4e-07
Identities = 26/60 (43%), Positives = 38/60 (63%)
Frame = -2
Query: 209 ISTSVPKQLIARLWKVQPEKKKPRAIVGEFEKLPIGEPVGSALQSWMSDGFPIHRSDIFH 30
+ T +P L + ++ E ++P+ + E++P GE VG A +SWM DGFPIHR DIFH
Sbjct: 37 LCTQIPGNLSPNV--LESELEEPKCLSLRIERIPKGELVGYAFRSWMGDGFPIHRGDIFH 94
>XP_011089465.1 PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial [Sesamum indicum]
Length = 534
Score = 58.2 bits (139), Expect = 7e-07
Identities = 29/56 (51%), Positives = 35/56 (62%)
Frame = -2
Query: 197 VPKQLIARLWKVQPEKKKPRAIVGEFEKLPIGEPVGSALQSWMSDGFPIHRSDIFH 30
VP + A K + E +P+++ EKLP GE V SA QSWM DG PIHR DIFH
Sbjct: 48 VPAETSAESGK-ESEDGEPKSLSWRIEKLPRGESVASAFQSWMGDGLPIHRGDIFH 102
>XP_012474842.1 PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial [Gossypium raimondii] KJB08878.1
hypothetical protein B456_001G110600 [Gossypium
raimondii]
Length = 518
Score = 57.8 bits (138), Expect = 9e-07
Identities = 23/44 (52%), Positives = 33/44 (75%)
Frame = -2
Query: 161 QPEKKKPRAIVGEFEKLPIGEPVGSALQSWMSDGFPIHRSDIFH 30
+ E+++P+ + E+LP GE VG A +SWM+DGFP+HR DIFH
Sbjct: 43 ESEQQEPKCLSLRIERLPKGETVGLAFKSWMADGFPVHRGDIFH 86
>XP_012075961.1 PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial [Jatropha curcas]
Length = 526
Score = 57.8 bits (138), Expect = 9e-07
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = -2
Query: 152 KKKPRAIVGEFEKLPIGEPVGSALQSWMSDGFPIHRSDIFH 30
+++P+ + EKLP GE VGSA QSWM +GFPIHR DIFH
Sbjct: 54 EEQPKCLSLRIEKLPRGELVGSAFQSWMREGFPIHRGDIFH 94