BLASTX nr result
ID: Panax24_contig00039055
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00039055
(463 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017234551.1 PREDICTED: ribulose bisphosphate carboxylase smal... 77 1e-14
XP_017235155.1 PREDICTED: ribulose bisphosphate carboxylase smal... 75 4e-14
XP_017234552.1 PREDICTED: ribulose bisphosphate carboxylase smal... 75 4e-14
CAP09638.1 acetolactate-synthase-C-DnaE intein C fusion protein ... 64 5e-09
BAR91105.1 ribulose 1,5-bisphosphate carboxylase/oxygenase small... 62 6e-09
XP_019173140.1 PREDICTED: ribulose bisphosphate carboxylase smal... 62 7e-09
AAA34191.1 ribulose-1,5-bisphosphate carboxylase, small subunit ... 61 9e-09
NP_001295872.1 ribulose bisphosphate carboxylase small chain 1, ... 61 9e-09
XP_018816892.1 PREDICTED: ribulose bisphosphate carboxylase smal... 60 1e-08
XP_015066301.1 PREDICTED: ribulose bisphosphate carboxylase smal... 61 1e-08
P32764.1 RecName: Full=Ribulose bisphosphate carboxylase small c... 61 1e-08
NP_001275244.1 ribulose bisphosphate carboxylase small chain C, ... 61 1e-08
ABZ04129.1 chloroplast ribulose-1,5-bisphosphate carboxylase/oxy... 57 2e-08
ACN22611.1 chloroplast ribulose-1,5-bisphosphate carboxylase/oxy... 57 2e-08
XP_015576041.1 PREDICTED: ribulose bisphosphate carboxylase smal... 59 2e-08
O22077.1 RecName: Full=Ribulose bisphosphate carboxylase small c... 60 3e-08
XP_018816891.1 PREDICTED: ribulose bisphosphate carboxylase smal... 60 3e-08
CAA29358.1 unnamed protein product, partial [synthetic construct] 57 3e-08
XP_019167059.1 PREDICTED: ribulose bisphosphate carboxylase smal... 59 5e-08
XP_002521232.1 PREDICTED: ribulose bisphosphate carboxylase smal... 59 5e-08
>XP_017234551.1 PREDICTED: ribulose bisphosphate carboxylase small chain 1B,
chloroplastic-like [Daucus carota subsp. sativus]
Length = 179
Score = 76.6 bits (187), Expect = 1e-14
Identities = 39/43 (90%), Positives = 42/43 (97%)
Frame = +2
Query: 32 MASSMISSVAPVTRATAAQASMLAPFTGLKSIASFPVTRKLDN 160
MASSMISSVAPVTRA+ AQASM+APFTGLKSIASFPVTRKL+N
Sbjct: 1 MASSMISSVAPVTRASPAQASMVAPFTGLKSIASFPVTRKLEN 43
>XP_017235155.1 PREDICTED: ribulose bisphosphate carboxylase small chain 1B,
chloroplastic-like [Daucus carota subsp. sativus]
Length = 179
Score = 75.5 bits (184), Expect = 4e-14
Identities = 38/43 (88%), Positives = 42/43 (97%)
Frame = +2
Query: 32 MASSMISSVAPVTRATAAQASMLAPFTGLKSIASFPVTRKLDN 160
MASSMISSVAPVTRA+ AQA+M+APFTGLKSIASFPVTRKL+N
Sbjct: 1 MASSMISSVAPVTRASPAQANMVAPFTGLKSIASFPVTRKLEN 43
>XP_017234552.1 PREDICTED: ribulose bisphosphate carboxylase small chain 1B,
chloroplastic-like [Daucus carota subsp. sativus]
XP_017234553.1 PREDICTED: ribulose bisphosphate
carboxylase small chain 1B, chloroplastic-like [Daucus
carota subsp. sativus] XP_017234554.1 PREDICTED:
ribulose bisphosphate carboxylase small chain 1B,
chloroplastic-like [Daucus carota subsp. sativus]
XP_017235154.1 PREDICTED: ribulose bisphosphate
carboxylase small chain 1B, chloroplastic-like [Daucus
carota subsp. sativus]
Length = 179
Score = 75.5 bits (184), Expect = 4e-14
Identities = 38/43 (88%), Positives = 42/43 (97%)
Frame = +2
Query: 32 MASSMISSVAPVTRATAAQASMLAPFTGLKSIASFPVTRKLDN 160
MASSMISSVAPVTRA+ AQA+M+APFTGLKSIASFPVTRKL+N
Sbjct: 1 MASSMISSVAPVTRASPAQANMVAPFTGLKSIASFPVTRKLEN 43
>CAP09638.1 acetolactate-synthase-C-DnaE intein C fusion protein
[Transformation Vector pICH13688]
Length = 337
Score = 63.5 bits (153), Expect = 5e-09
Identities = 35/44 (79%), Positives = 39/44 (88%), Gaps = 1/44 (2%)
Frame = +2
Query: 32 MASSMISSVAPV-TRATAAQASMLAPFTGLKSIASFPVTRKLDN 160
MASSM+SS A V TRA+AAQASM+APFTGLKS ASFPVTRK +N
Sbjct: 1 MASSMLSSAAVVATRASAAQASMVAPFTGLKSAASFPVTRKQNN 44
>BAR91105.1 ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit
(rbcS) [Ipomoea batatas]
Length = 177
Score = 61.6 bits (148), Expect = 6e-09
Identities = 31/40 (77%), Positives = 36/40 (90%)
Frame = +2
Query: 32 MASSMISSVAPVTRATAAQASMLAPFTGLKSIASFPVTRK 151
MASS++SS A +RATAAQASM+APFTGLKS ASFPVT+K
Sbjct: 1 MASSVLSSTAIASRATAAQASMVAPFTGLKSTASFPVTKK 40
>XP_019173140.1 PREDICTED: ribulose bisphosphate carboxylase small chain SSU11A,
chloroplastic-like [Ipomoea nil]
Length = 180
Score = 61.6 bits (148), Expect = 7e-09
Identities = 31/40 (77%), Positives = 36/40 (90%)
Frame = +2
Query: 32 MASSMISSVAPVTRATAAQASMLAPFTGLKSIASFPVTRK 151
MASS++SS A +RATAAQASM+APFTGLKS ASFPVT+K
Sbjct: 1 MASSVLSSTAIASRATAAQASMVAPFTGLKSTASFPVTKK 40
>AAA34191.1 ribulose-1,5-bisphosphate carboxylase, small subunit precursor
[Solanum lycopersicum]
Length = 181
Score = 61.2 bits (147), Expect = 9e-09
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = +2
Query: 32 MASSMISSVAPVTRATAAQASMLAPFTGLKSIASFPVTRKLDN 160
MASS++SS A TR+ AQASM+APFTGLKS ASFPVT+K +N
Sbjct: 1 MASSIVSSAAAATRSNVAQASMVAPFTGLKSAASFPVTKKNNN 43
>NP_001295872.1 ribulose bisphosphate carboxylase small chain 1, chloroplastic
[Solanum lycopersicum] P08706.2 RecName: Full=Ribulose
bisphosphate carboxylase small chain 1, chloroplastic;
Short=RuBisCO small subunit 1; AltName: Full=LESS 17;
Flags: Precursor AAA34188.1 ribulose-1,5-bisphophate
carboxylase/ oxygenase small subunit [Solanum
lycopersicum] CAA29400.1 ribulose 1,5-bisphosphate
carboxylase/oxygenase [Solanum lycopersicum]
Length = 181
Score = 61.2 bits (147), Expect = 9e-09
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = +2
Query: 32 MASSMISSVAPVTRATAAQASMLAPFTGLKSIASFPVTRKLDN 160
MASS++SS A TR+ AQASM+APFTGLKS ASFPVT+K +N
Sbjct: 1 MASSIVSSAAAATRSNVAQASMVAPFTGLKSAASFPVTKKNNN 43
>XP_018816892.1 PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic isoform X2 [Juglans regia]
Length = 140
Score = 60.1 bits (144), Expect = 1e-08
Identities = 33/45 (73%), Positives = 38/45 (84%), Gaps = 2/45 (4%)
Frame = +2
Query: 32 MASSMISS--VAPVTRATAAQASMLAPFTGLKSIASFPVTRKLDN 160
MASSMISS VA V RAT AQASM+APFTGLKS A+FPVT++ +N
Sbjct: 1 MASSMISSATVATVNRATPAQASMVAPFTGLKSAATFPVTQRANN 45
>XP_015066301.1 PREDICTED: ribulose bisphosphate carboxylase small chain 1,
chloroplastic [Solanum pennellii]
Length = 181
Score = 60.8 bits (146), Expect = 1e-08
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = +2
Query: 32 MASSMISSVAPVTRATAAQASMLAPFTGLKSIASFPVTRKLDN 160
MASS++SS A TR+ AQASM+APFTGLKS ASFPVT+K +N
Sbjct: 1 MASSIVSSAAAATRSNVAQASMVAPFTGLKSSASFPVTKKNNN 43
>P32764.1 RecName: Full=Ribulose bisphosphate carboxylase small chain 3,
chloroplastic; Short=RuBisCO small subunit 3; Flags:
Precursor CAA49417.1 ribulose bisphosphate carboxylase
[Solanum tuberosum]
Length = 181
Score = 60.8 bits (146), Expect = 1e-08
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = +2
Query: 32 MASSMISSVAPVTRATAAQASMLAPFTGLKSIASFPVTRKLDN 160
MASS++SS A TR+ AQASM+APFTGLKS ASFPVT+K +N
Sbjct: 1 MASSIVSSAAVATRSNVAQASMVAPFTGLKSAASFPVTKKNNN 43
>NP_001275244.1 ribulose bisphosphate carboxylase small chain C, chloroplastic
[Solanum tuberosum] P10647.1 RecName: Full=Ribulose
bisphosphate carboxylase small chain C, chloroplastic;
Short=RuBisCO small subunit C; Flags: Precursor
AAA33838.1 ribulose bisphosphate carboxylase (EC
4.1.1.39) [Solanum tuberosum]
Length = 181
Score = 60.8 bits (146), Expect = 1e-08
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = +2
Query: 32 MASSMISSVAPVTRATAAQASMLAPFTGLKSIASFPVTRKLDN 160
MASS++SS A TR+ AQASM+APFTGLKS ASFPVT+K +N
Sbjct: 1 MASSIVSSAAVATRSNVAQASMVAPFTGLKSAASFPVTKKNNN 43
>ABZ04129.1 chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit, partial [Jatropha curcas]
Length = 58
Score = 57.4 bits (137), Expect = 2e-08
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +2
Query: 32 MASSMISSVAPVTRATAAQASMLAPFTGLKSIASFPVTRK 151
MASS++SS A TR+ AQA+M+APFTGLKS ASFPV+RK
Sbjct: 1 MASSVLSSAAVATRSNVAQANMVAPFTGLKSAASFPVSRK 40
>ACN22611.1 chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit, partial [Brassica juncea]
Length = 59
Score = 57.4 bits (137), Expect = 2e-08
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +2
Query: 32 MASSMISSVAPVTRATAAQASMLAPFTGLKSIASFPVTRK 151
MASS++SS A TR+ AQA+M+APFTGLKS ASFPV+RK
Sbjct: 1 MASSVLSSAAVATRSNVAQANMVAPFTGLKSAASFPVSRK 40
>XP_015576041.1 PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic isoform X2 [Ricinus communis]
Length = 137
Score = 59.3 bits (142), Expect = 2e-08
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = +2
Query: 32 MASSMISSVAPVTRATAAQASMLAPFTGLKSIASFPVTRKLDN 160
MASSMISS A V+R++ AQA+M+APFTGLKS ASFPVTRK +N
Sbjct: 1 MASSMISS-ASVSRSSPAQATMVAPFTGLKSAASFPVTRKANN 42
>O22077.1 RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor BAA23214.1 small subunit of
ribulose-1,5-bisphosphate carboxylase/oxygenase [Fagus
crenata]
Length = 182
Score = 60.1 bits (144), Expect = 3e-08
Identities = 33/45 (73%), Positives = 38/45 (84%), Gaps = 2/45 (4%)
Frame = +2
Query: 32 MASSMISS--VAPVTRATAAQASMLAPFTGLKSIASFPVTRKLDN 160
MASSMISS VA V+RAT AQA+M+APFTGLKS A+FP TRK +N
Sbjct: 1 MASSMISSATVATVSRATPAQATMVAPFTGLKSTAAFPATRKSNN 45
>XP_018816891.1 PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic isoform X1 [Juglans regia]
Length = 183
Score = 60.1 bits (144), Expect = 3e-08
Identities = 33/45 (73%), Positives = 38/45 (84%), Gaps = 2/45 (4%)
Frame = +2
Query: 32 MASSMISS--VAPVTRATAAQASMLAPFTGLKSIASFPVTRKLDN 160
MASSMISS VA V RAT AQASM+APFTGLKS A+FPVT++ +N
Sbjct: 1 MASSMISSATVATVNRATPAQASMVAPFTGLKSAATFPVTQRANN 45
>CAA29358.1 unnamed protein product, partial [synthetic construct]
Length = 75
Score = 57.4 bits (137), Expect = 3e-08
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +2
Query: 32 MASSMISSVAPVTRATAAQASMLAPFTGLKSIASFPVTRK 151
MASS++SS A TR+ AQA+M+APFTGLKS ASFPV+RK
Sbjct: 1 MASSVLSSAAVATRSNVAQANMVAPFTGLKSAASFPVSRK 40
>XP_019167059.1 PREDICTED: ribulose bisphosphate carboxylase small chain SSU11A,
chloroplastic-like [Ipomoea nil]
Length = 178
Score = 59.3 bits (142), Expect = 5e-08
Identities = 31/40 (77%), Positives = 35/40 (87%)
Frame = +2
Query: 32 MASSMISSVAPVTRATAAQASMLAPFTGLKSIASFPVTRK 151
MASS++SS A RATAA+ASM+APFTGLKS ASFPVTRK
Sbjct: 1 MASSVLSSAAISGRATAAKASMVAPFTGLKSTASFPVTRK 40
>XP_002521232.1 PREDICTED: ribulose bisphosphate carboxylase small chain 1B,
chloroplastic isoform X1 [Ricinus communis] EEF41184.1
Ribulose bisphosphate carboxylase small chain 1B,
chloroplast precursor, putative [Ricinus communis]
Length = 181
Score = 59.3 bits (142), Expect = 5e-08
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = +2
Query: 32 MASSMISSVAPVTRATAAQASMLAPFTGLKSIASFPVTRKLDN 160
MASSMISS A V+R++ AQA+M+APFTGLKS ASFPVTRK +N
Sbjct: 1 MASSMISS-ASVSRSSPAQATMVAPFTGLKSAASFPVTRKANN 42