BLASTX nr result

ID: Panax24_contig00039040 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00039040
         (575 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010681618.1 PREDICTED: uncharacterized protein LOC104896557 [...    44   2e-06

>XP_010681618.1 PREDICTED: uncharacterized protein LOC104896557 [Beta vulgaris
           subsp. vulgaris]
          Length = 392

 Score = 43.9 bits (102), Expect(2) = 2e-06
 Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = -3

Query: 234 GW--DHNAPVNERARIIVCWDGNEFDVSLIMLNTQVIFCKVTVKGLSKS*YMSFVYGLN 64
           GW    N  V +  RIIV W  N FDV++ ++  Q+I C+V  KG       SFVYG N
Sbjct: 55  GWCFTTNNSVVDSGRIIVAWLPNSFDVAVELMTDQLIHCRVQPKGPVAPFMCSFVYGKN 113



 Score = 35.0 bits (79), Expect(2) = 2e-06
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = -2

Query: 388 WIVMGFNKSCKYRDVIDFIAVNRVSLLCSVETKISQVKVKKN*INY*EIWC 236
           W V G N+  K  DV  FI+++++ LL  +ETK+   K+        + WC
Sbjct: 7   WNVRGLNRQAKQLDVKRFISMHKIGLLSLLETKVKMSKMGNLYQRLCDGWC 57


Top