BLASTX nr result
ID: Panax24_contig00038836
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax24_contig00038836 (457 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value YP_009256027.1 cytochrome b6/f complex subunit VIII (chloroplast... 55 2e-07 XP_002888353.1 hypothetical protein ARALYDRAFT_893970 [Arabidops... 54 2e-06 KXG32587.1 hypothetical protein SORBI_003G171900 [Sorghum bicolor] 50 6e-06 >YP_009256027.1 cytochrome b6/f complex subunit VIII (chloroplast) [Scopolia parviflora] ANF05206.1 cytochrome b6/f complex subunit VIII (chloroplast) [Scopolia parviflora] Length = 63 Score = 54.7 bits (130), Expect = 2e-07 Identities = 23/28 (82%), Positives = 26/28 (92%) Frame = -1 Query: 457 GCFNGSLYIFPFTRSMGKKWTLEVLLID 374 GCFNGSLY FPFTRS+GK+WTL VLLI+ Sbjct: 24 GCFNGSLYFFPFTRSVGKEWTLGVLLIE 51 >XP_002888353.1 hypothetical protein ARALYDRAFT_893970 [Arabidopsis lyrata subsp. lyrata] EFH64612.1 hypothetical protein ARALYDRAFT_893970 [Arabidopsis lyrata subsp. lyrata] Length = 120 Score = 53.9 bits (128), Expect = 2e-06 Identities = 22/27 (81%), Positives = 25/27 (92%) Frame = -1 Query: 457 GCFNGSLYIFPFTRSMGKKWTLEVLLI 377 GCFNGS YIFP +RS+GKKWTLE+LLI Sbjct: 33 GCFNGSFYIFPLSRSVGKKWTLEILLI 59 >KXG32587.1 hypothetical protein SORBI_003G171900 [Sorghum bicolor] Length = 37 Score = 50.4 bits (119), Expect = 6e-06 Identities = 26/29 (89%), Positives = 26/29 (89%) Frame = -2 Query: 456 AALMVVFTFSLSLVVWGRSGL*RYY*LIE 370 AALMVVFTFSLSLVVWGRSGL YY LIE Sbjct: 9 AALMVVFTFSLSLVVWGRSGLKGYYQLIE 37