BLASTX nr result

ID: Panax24_contig00038836 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00038836
         (457 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YP_009256027.1 cytochrome b6/f complex subunit VIII (chloroplast...    55   2e-07
XP_002888353.1 hypothetical protein ARALYDRAFT_893970 [Arabidops...    54   2e-06
KXG32587.1 hypothetical protein SORBI_003G171900 [Sorghum bicolor]     50   6e-06

>YP_009256027.1 cytochrome b6/f complex subunit VIII (chloroplast) [Scopolia
           parviflora] ANF05206.1 cytochrome b6/f complex subunit
           VIII (chloroplast) [Scopolia parviflora]
          Length = 63

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = -1

Query: 457 GCFNGSLYIFPFTRSMGKKWTLEVLLID 374
           GCFNGSLY FPFTRS+GK+WTL VLLI+
Sbjct: 24  GCFNGSLYFFPFTRSVGKEWTLGVLLIE 51


>XP_002888353.1 hypothetical protein ARALYDRAFT_893970 [Arabidopsis lyrata subsp.
           lyrata] EFH64612.1 hypothetical protein
           ARALYDRAFT_893970 [Arabidopsis lyrata subsp. lyrata]
          Length = 120

 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 22/27 (81%), Positives = 25/27 (92%)
 Frame = -1

Query: 457 GCFNGSLYIFPFTRSMGKKWTLEVLLI 377
           GCFNGS YIFP +RS+GKKWTLE+LLI
Sbjct: 33  GCFNGSFYIFPLSRSVGKKWTLEILLI 59


>KXG32587.1 hypothetical protein SORBI_003G171900 [Sorghum bicolor]
          Length = 37

 Score = 50.4 bits (119), Expect = 6e-06
 Identities = 26/29 (89%), Positives = 26/29 (89%)
 Frame = -2

Query: 456 AALMVVFTFSLSLVVWGRSGL*RYY*LIE 370
           AALMVVFTFSLSLVVWGRSGL  YY LIE
Sbjct: 9   AALMVVFTFSLSLVVWGRSGLKGYYQLIE 37


Top