BLASTX nr result

ID: Panax24_contig00038751 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00038751
         (842 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017215137.1 PREDICTED: pentatricopeptide repeat-containing pr...    74   3e-11
XP_009791185.1 PREDICTED: pentatricopeptide repeat-containing pr...    69   1e-09
XP_016500105.1 PREDICTED: pentatricopeptide repeat-containing pr...    69   1e-09
XP_018626240.1 PREDICTED: pentatricopeptide repeat-containing pr...    69   2e-09
XP_016572850.1 PREDICTED: pentatricopeptide repeat-containing pr...    69   2e-09
XP_018626231.1 PREDICTED: pentatricopeptide repeat-containing pr...    69   2e-09
XP_016502873.1 PREDICTED: pentatricopeptide repeat-containing pr...    69   2e-09
XP_015580285.1 PREDICTED: pentatricopeptide repeat-containing pr...    68   3e-09
EEF51569.1 pentatricopeptide repeat-containing protein, putative...    68   3e-09
XP_019227745.1 PREDICTED: pentatricopeptide repeat-containing pr...    68   4e-09
XP_015085766.1 PREDICTED: pentatricopeptide repeat-containing pr...    68   4e-09
XP_006352876.1 PREDICTED: pentatricopeptide repeat-containing pr...    68   4e-09
XP_010325562.1 PREDICTED: pentatricopeptide repeat-containing pr...    68   4e-09
XP_019176973.1 PREDICTED: pentatricopeptide repeat-containing pr...    67   1e-08
KDP22434.1 hypothetical protein JCGZ_26265 [Jatropha curcas]           65   2e-08
XP_012090764.1 PREDICTED: pentatricopeptide repeat-containing pr...    65   2e-08
XP_018823887.1 PREDICTED: pentatricopeptide repeat-containing pr...    65   3e-08
XP_003635514.3 PREDICTED: pentatricopeptide repeat-containing pr...    64   6e-08
CBI38482.3 unnamed protein product, partial [Vitis vinifera]           64   7e-08
CAN67256.1 hypothetical protein VITISV_039434 [Vitis vinifera]         64   1e-07

>XP_017215137.1 PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial [Daucus carota subsp. sativus]
           XP_017215146.1 PREDICTED: pentatricopeptide
           repeat-containing protein At5g64320, mitochondrial
           [Daucus carota subsp. sativus] XP_017215154.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial [Daucus carota subsp. sativus]
           XP_017215162.1 PREDICTED: pentatricopeptide
           repeat-containing protein At5g64320, mitochondrial
           [Daucus carota subsp. sativus] XP_017215170.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial [Daucus carota subsp. sativus]
          Length = 732

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 32/48 (66%), Positives = 41/48 (85%)
 Frame = -3

Query: 840 LICSYCKAGIRDDAYELLSRGVTNGFIPNDVTWYLLVKNFVVEQYEEI 697
           LICS+CKA + D+AY LL RGV+NGFIPNDVTWY L++  V+++YEEI
Sbjct: 670 LICSFCKADMLDNAYALLCRGVSNGFIPNDVTWYFLIRYSVMKKYEEI 717


>XP_009791185.1 PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial [Nicotiana sylvestris]
          Length = 668

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 30/48 (62%), Positives = 38/48 (79%)
 Frame = -3

Query: 840 LICSYCKAGIRDDAYELLSRGVTNGFIPNDVTWYLLVKNFVVEQYEEI 697
           LI SYCK  + DDAY LL+RG+  GFIPN+VTWY+LV+NFV + YE +
Sbjct: 619 LISSYCKMHMLDDAYTLLTRGIAVGFIPNNVTWYILVRNFVRKSYESV 666


>XP_016500105.1 PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Nicotiana tabacum]
          Length = 717

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 30/48 (62%), Positives = 38/48 (79%)
 Frame = -3

Query: 840 LICSYCKAGIRDDAYELLSRGVTNGFIPNDVTWYLLVKNFVVEQYEEI 697
           LI SYCK  + DDAY LL+RG+  GFIPN+VTWY+LV+NFV + YE +
Sbjct: 668 LISSYCKMHMLDDAYTLLTRGIAVGFIPNNVTWYILVRNFVRKSYESV 715


>XP_018626240.1 PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like isoform X2 [Nicotiana
           tomentosiformis]
          Length = 678

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 30/48 (62%), Positives = 38/48 (79%)
 Frame = -3

Query: 840 LICSYCKAGIRDDAYELLSRGVTNGFIPNDVTWYLLVKNFVVEQYEEI 697
           LI SYCK  + DDAY LL+RG+  GFIPN+VTWY+LV+NFV + YE +
Sbjct: 629 LISSYCKMHMLDDAYTLLTRGIAVGFIPNNVTWYILVRNFVRKSYESL 676


>XP_016572850.1 PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Capsicum annuum] XP_016572858.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial-like [Capsicum annuum]
           XP_016541626.1 PREDICTED: pentatricopeptide
           repeat-containing protein At5g64320, mitochondrial-like
           [Capsicum annuum]
          Length = 720

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 31/50 (62%), Positives = 39/50 (78%)
 Frame = -3

Query: 840 LICSYCKAGIRDDAYELLSRGVTNGFIPNDVTWYLLVKNFVVEQYEEI*T 691
           LI SYCK  + DDAY LL+RG+  GFIPN+VTWY+LV+NFV + YE + T
Sbjct: 669 LILSYCKMRMIDDAYTLLARGIAVGFIPNNVTWYILVRNFVRKSYEPVTT 718


>XP_018626231.1 PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like isoform X1 [Nicotiana
           tomentosiformis] XP_018626232.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like isoform X1 [Nicotiana
           tomentosiformis] XP_018626233.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like isoform X1 [Nicotiana
           tomentosiformis] XP_018626234.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like isoform X1 [Nicotiana
           tomentosiformis] XP_018626235.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like isoform X1 [Nicotiana
           tomentosiformis] XP_018626236.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like isoform X1 [Nicotiana
           tomentosiformis] XP_009600516.2 PREDICTED:
           pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like isoform X1 [Nicotiana
           tomentosiformis] XP_018626237.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like isoform X1 [Nicotiana
           tomentosiformis] XP_018626238.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like isoform X1 [Nicotiana
           tomentosiformis] XP_018626239.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like isoform X1 [Nicotiana
           tomentosiformis]
          Length = 727

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 30/48 (62%), Positives = 38/48 (79%)
 Frame = -3

Query: 840 LICSYCKAGIRDDAYELLSRGVTNGFIPNDVTWYLLVKNFVVEQYEEI 697
           LI SYCK  + DDAY LL+RG+  GFIPN+VTWY+LV+NFV + YE +
Sbjct: 678 LISSYCKMHMLDDAYTLLTRGIAVGFIPNNVTWYILVRNFVRKSYESL 725


>XP_016502873.1 PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Nicotiana tabacum] XP_016502874.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial-like [Nicotiana tabacum]
           XP_016502875.1 PREDICTED: pentatricopeptide
           repeat-containing protein At5g64320, mitochondrial-like
           [Nicotiana tabacum] XP_016502876.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Nicotiana tabacum] XP_016502877.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial-like [Nicotiana tabacum]
           XP_016502878.1 PREDICTED: pentatricopeptide
           repeat-containing protein At5g64320, mitochondrial-like
           [Nicotiana tabacum] XP_016502879.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Nicotiana tabacum]
          Length = 727

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 30/48 (62%), Positives = 38/48 (79%)
 Frame = -3

Query: 840 LICSYCKAGIRDDAYELLSRGVTNGFIPNDVTWYLLVKNFVVEQYEEI 697
           LI SYCK  + DDAY LL+RG+  GFIPN+VTWY+LV+NFV + YE +
Sbjct: 678 LISSYCKMHMLDDAYTLLTRGIAVGFIPNNVTWYILVRNFVRKSYESL 725


>XP_015580285.1 PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial isoform X1 [Ricinus communis]
          Length = 721

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 30/43 (69%), Positives = 35/43 (81%)
 Frame = -3

Query: 840 LICSYCKAGIRDDAYELLSRGVTNGFIPNDVTWYLLVKNFVVE 712
           LIC +C+AG+ DDAY LL RGV N FIPNDVTWY+LV NF+ E
Sbjct: 666 LICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKE 708


>EEF51569.1 pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 30/43 (69%), Positives = 35/43 (81%)
 Frame = -3

Query: 840 LICSYCKAGIRDDAYELLSRGVTNGFIPNDVTWYLLVKNFVVE 712
           LIC +C+AG+ DDAY LL RGV N FIPNDVTWY+LV NF+ E
Sbjct: 666 LICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKE 708


>XP_019227745.1 PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial [Nicotiana attenuata] XP_019227746.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial [Nicotiana attenuata]
           OIT31187.1 pentatricopeptide repeat-containing protein,
           mitochondrial [Nicotiana attenuata]
          Length = 717

 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 29/48 (60%), Positives = 38/48 (79%)
 Frame = -3

Query: 840 LICSYCKAGIRDDAYELLSRGVTNGFIPNDVTWYLLVKNFVVEQYEEI 697
           LI S+CK  + DDAY LL+RG+  GFIPN+VTWY+LV+NFV + YE +
Sbjct: 668 LISSFCKMHMLDDAYTLLTRGIAVGFIPNNVTWYILVRNFVRKSYESV 715


>XP_015085766.1 PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial [Solanum pennellii]
          Length = 720

 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 30/50 (60%), Positives = 37/50 (74%)
 Frame = -3

Query: 840 LICSYCKAGIRDDAYELLSRGVTNGFIPNDVTWYLLVKNFVVEQYEEI*T 691
           LI SYCK  + DDAY L +RG+  GFIPN VTWY+LV+NFV + YE + T
Sbjct: 669 LISSYCKMRMLDDAYTLFTRGIAVGFIPNSVTWYILVRNFVRKSYESVTT 718


>XP_006352876.1 PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial isoform X1 [Solanum tuberosum]
           XP_006352877.1 PREDICTED: pentatricopeptide
           repeat-containing protein At5g64320, mitochondrial
           isoform X1 [Solanum tuberosum] XP_015166595.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial isoform X1 [Solanum tuberosum]
           XP_015166596.1 PREDICTED: pentatricopeptide
           repeat-containing protein At5g64320, mitochondrial
           isoform X1 [Solanum tuberosum]
          Length = 720

 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 30/50 (60%), Positives = 37/50 (74%)
 Frame = -3

Query: 840 LICSYCKAGIRDDAYELLSRGVTNGFIPNDVTWYLLVKNFVVEQYEEI*T 691
           LI SYCK  + DDAY L +RG+  GFIPN VTWY+LV+NFV + YE + T
Sbjct: 669 LISSYCKMRMLDDAYTLFTRGIAVGFIPNSVTWYILVRNFVRKSYESVTT 718


>XP_010325562.1 PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial [Solanum lycopersicum] XP_019070867.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial [Solanum lycopersicum]
           XP_019070868.1 PREDICTED: pentatricopeptide
           repeat-containing protein At5g64320, mitochondrial
           [Solanum lycopersicum] XP_019070869.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial [Solanum lycopersicum] XP_019070870.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial [Solanum lycopersicum]
          Length = 720

 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 30/50 (60%), Positives = 37/50 (74%)
 Frame = -3

Query: 840 LICSYCKAGIRDDAYELLSRGVTNGFIPNDVTWYLLVKNFVVEQYEEI*T 691
           LI SYCK  + DDAY L +RG+  GFIPN VTWY+LV+NFV + YE + T
Sbjct: 669 LISSYCKMRMLDDAYTLFTRGIAVGFIPNSVTWYILVRNFVRKSYESVTT 718


>XP_019176973.1 PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial [Ipomoea nil]
          Length = 720

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 29/43 (67%), Positives = 36/43 (83%)
 Frame = -3

Query: 840 LICSYCKAGIRDDAYELLSRGVTNGFIPNDVTWYLLVKNFVVE 712
           LI ++CK G+ DDAY LL RGV+NGFIPN +TW++LV NFVVE
Sbjct: 669 LISTFCKMGMLDDAYMLLVRGVSNGFIPNGITWHVLVNNFVVE 711


>KDP22434.1 hypothetical protein JCGZ_26265 [Jatropha curcas]
          Length = 724

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 30/51 (58%), Positives = 38/51 (74%)
 Frame = -3

Query: 840 LICSYCKAGIRDDAYELLSRGVTNGFIPNDVTWYLLVKNFVVEQYEEI*TF 688
           LIC YC+ G+ DDA+ LL RGV N F+P+DVTWY+LV NFV +  +E  TF
Sbjct: 669 LICWYCREGMFDDAFLLLHRGVNNDFVPSDVTWYILVSNFVKKIGQENSTF 719


>XP_012090764.1 PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial [Jatropha curcas]
          Length = 802

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 30/51 (58%), Positives = 38/51 (74%)
 Frame = -3

Query: 840 LICSYCKAGIRDDAYELLSRGVTNGFIPNDVTWYLLVKNFVVEQYEEI*TF 688
           LIC YC+ G+ DDA+ LL RGV N F+P+DVTWY+LV NFV +  +E  TF
Sbjct: 747 LICWYCREGMFDDAFLLLHRGVNNDFVPSDVTWYILVSNFVKKIGQENSTF 797


>XP_018823887.1 PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like isoform X1 [Juglans regia]
          Length = 843

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 32/51 (62%), Positives = 35/51 (68%)
 Frame = -3

Query: 840 LICSYCKAGIRDDAYELLSRGVTNGFIPNDVTWYLLVKNFVVEQYEEI*TF 688
           LI  YC+ G+ DDAY  L  GV NGF+PNDVTWYLLV NFV E   E  TF
Sbjct: 788 LIRWYCREGMFDDAYLFLREGVDNGFVPNDVTWYLLVTNFVRESAMESQTF 838


>XP_003635514.3 PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 347

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 29/47 (61%), Positives = 37/47 (78%)
 Frame = -3

Query: 840 LICSYCKAGIRDDAYELLSRGVTNGFIPNDVTWYLLVKNFVVEQYEE 700
           LI  +CK G+ DDA+ LLSRGV +GFIPN+VTWY+LV NF+ E  +E
Sbjct: 300 LISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346


>CBI38482.3 unnamed protein product, partial [Vitis vinifera]
          Length = 368

 Score = 63.5 bits (153), Expect = 7e-08
 Identities = 29/47 (61%), Positives = 37/47 (78%)
 Frame = -3

Query: 840 LICSYCKAGIRDDAYELLSRGVTNGFIPNDVTWYLLVKNFVVEQYEE 700
           LI  +CK G+ DDA+ LLSRGV +GFIPN+VTWY+LV NF+ E  +E
Sbjct: 321 LISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 367


>CAN67256.1 hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 29/47 (61%), Positives = 37/47 (78%)
 Frame = -3

Query: 840 LICSYCKAGIRDDAYELLSRGVTNGFIPNDVTWYLLVKNFVVEQYEE 700
           LI  +CK G+ DDA+ LLSRGV +GFIPN+VTWY+LV NF+ E  +E
Sbjct: 675 LISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721


Top