BLASTX nr result

ID: Panax24_contig00038740 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00038740
         (424 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017238206.1 PREDICTED: squamosa promoter-binding-like protein...    61   3e-08
XP_010250660.1 PREDICTED: teosinte glume architecture 1-like [Ne...    56   2e-06
XP_015882190.1 PREDICTED: squamosa promoter-binding-like protein...    54   1e-05

>XP_017238206.1 PREDICTED: squamosa promoter-binding-like protein 13A [Daucus
           carota subsp. sativus] XP_017238207.1 PREDICTED:
           squamosa promoter-binding-like protein 13A [Daucus
           carota subsp. sativus] XP_017238208.1 PREDICTED:
           squamosa promoter-binding-like protein 13A [Daucus
           carota subsp. sativus] KZN02570.1 hypothetical protein
           DCAR_011324 [Daucus carota subsp. sativus]
          Length = 381

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 38/86 (44%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
 Frame = -1

Query: 421 ALSLLSTRQTQTREKSMSPLK-QQDTIHLNHPTGTTSLQFNELAPYSNPQVMEDKALGVV 245
           ALSLLST Q Q  +  M+P   Q D  H + PTG  +LQF+E+ PYS P++MEDK +   
Sbjct: 287 ALSLLSTNQIQAAKTIMNPSAYQHDAFHSSQPTGI-NLQFDEMYPYSYPRIMEDKPIRAG 345

Query: 244 LNPDASNIYE-HRDGIFHVGSEELLE 170
              D +NI++   +GI  + S EL E
Sbjct: 346 AISDGNNIFDCSINGISQLCSNELYE 371


>XP_010250660.1 PREDICTED: teosinte glume architecture 1-like [Nelumbo nucifera]
           XP_010250661.1 PREDICTED: teosinte glume architecture
           1-like [Nelumbo nucifera] XP_010250662.1 PREDICTED:
           teosinte glume architecture 1-like [Nelumbo nucifera]
          Length = 395

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 38/96 (39%), Positives = 49/96 (51%)
 Frame = -1

Query: 421 ALSLLSTRQTQTREKSMSPLKQQDTIHLNHPTGTTSLQFNELAPYSNPQVMEDKALGVVL 242
           ALSLLS+   Q+   SM+ + Q D I +  P     LQ+N +  Y   Q MED+  G VL
Sbjct: 301 ALSLLSSPPMQSSGISMNHVVQPDPIPMAQPL-VPVLQYNGIGRYPCSQGMEDEQGGSVL 359

Query: 241 NPDASNIYEHRDGIFHVGSEELLETRASQLLSFSWK 134
            PDASN   H  G+F +G          Q L FSW+
Sbjct: 360 APDASNADLHCHGVFQLGPYGSDRNGGPQTLPFSWE 395


>XP_015882190.1 PREDICTED: squamosa promoter-binding-like protein 13A [Ziziphus
           jujuba] XP_015882191.1 PREDICTED: squamosa
           promoter-binding-like protein 13A [Ziziphus jujuba]
          Length = 394

 Score = 53.9 bits (128), Expect = 1e-05
 Identities = 35/95 (36%), Positives = 46/95 (48%)
 Frame = -1

Query: 421 ALSLLSTRQTQTREKSMSPLKQQDTIHLNHPTGTTSLQFNELAPYSNPQVMEDKALGVVL 242
           ALSLLS+ QTQT E  +  + Q ++I L HP G  SL  N L P  +           V 
Sbjct: 310 ALSLLSSPQTQTSEIGLRHIVQPNSISLVHPVGPPSLHGNSLEPIDS-----------VF 358

Query: 241 NPDASNIYEHRDGIFHVGSEELLETRASQLLSFSW 137
             + S+   H  G+FH+GS+      A Q L F W
Sbjct: 359 VSNGSDASVHCPGMFHMGSDGSQGNEAPQTLPFHW 393


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