BLASTX nr result

ID: Panax24_contig00037982 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00037982
         (435 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAV73166.1 DUF4283 domain-containing protein, partial [Cephalotu...    56   2e-06
GAV93032.1 DUF4283 domain-containing protein/zf-CCHC_4 domain-co...    55   3e-06

>GAV73166.1 DUF4283 domain-containing protein, partial [Cephalotus
           follicularis]
          Length = 333

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 14/146 (9%)
 Frame = +1

Query: 4   VKVEYQNRPQLCSHCKTFGHSLLRCPK-ANYKWLPKLQKTNDCSTVAVTESLLRTPAPPK 180
           V VEY  RPQ CS CK F H+   CPK A  +W+PK              S++ T   P+
Sbjct: 161 VGVEYPWRPQACSLCKVFDHANKSCPKAARREWIPK--------------SVVETNRKPE 206

Query: 181 SVKDPVATSESDNWTLVEKGPKHL---VPSPDPSLVGDLNSFLPIAVP-------GGILE 330
             +  +        T+ +K P+H+   +P+ D +  G +++ +P   P        G L 
Sbjct: 207 DAEGRI--------TVKKKNPQHMTVPLPTVDEAGAGKMDT-IPNQAPKTPSKRGEGSLT 257

Query: 331 DP---SDTDCSPSPNPLVGKLKMIDG 399
           +P     +  S +PNPL  K+ MIDG
Sbjct: 258 NPIYDETSSASQNPNPLDSKVAMIDG 283


>GAV93032.1 DUF4283 domain-containing protein/zf-CCHC_4 domain-containing
           protein, partial [Cephalotus follicularis]
          Length = 265

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 45/136 (33%), Positives = 54/136 (39%), Gaps = 4/136 (2%)
 Frame = +1

Query: 4   VKVEYQNRPQLCSHCKTFGHSLLRCPKA-NYKWLPKLQKTNDCSTVAVTESLLRTPAPPK 180
           V VEY  +PQ CS CK F HS   CPKA   +WLPK      C      E  +       
Sbjct: 96  VNVEYPWKPQACSLCKVFDHSNKSCPKAVRREWLPK-PVVEACRKPEDAEGWITVKRKNP 154

Query: 181 SVKD---PVATSESDNWTLVEKGPKHLVPSPDPSLVGDLNSFLPIAVPGGILEDPSDTDC 351
           SV     PV  +  D   + +       P  +  L GD N             DPS    
Sbjct: 155 SVASAPAPVEDNHPDGEAMAQPHQAPKTPVKNCELPGDSN------------RDPS--SA 200

Query: 352 SPSPNPLVGKLKMIDG 399
           SP  NPL+ K+  IDG
Sbjct: 201 SPDINPLIAKVVHIDG 216


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