BLASTX nr result
ID: Panax24_contig00037957
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00037957
(572 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_006452100.1 hypothetical protein CICLE_v10010285mg, partial [... 120 2e-28
KYP48154.1 Retrovirus-related Pol polyprotein from transposon TN... 109 2e-26
JAU85822.1 Retrovirus-related Pol polyprotein from transposon TN... 107 2e-26
KYP50827.1 Retrovirus-related Pol polyprotein from transposon TN... 108 3e-26
CAN77498.1 hypothetical protein VITISV_042223 [Vitis vinifera] 113 3e-26
CAN62076.1 hypothetical protein VITISV_015538 [Vitis vinifera] 108 5e-25
XP_019228184.1 PREDICTED: valine--tRNA ligase, mitochondrial 1-l... 110 1e-24
KYP54652.1 Retrovirus-related Pol polyprotein from transposon TN... 109 2e-24
KYP64289.1 Retrovirus-related Pol polyprotein from transposon TN... 109 2e-24
KYP64290.1 Retrovirus-related Pol polyprotein from transposon TN... 109 2e-24
KYP36589.1 Retrovirus-related Pol polyprotein from transposon TN... 109 2e-24
CAX68207.1 Copia-like retrotransposon [Helianthus annuus] 109 3e-24
KYP59837.1 Retrovirus-related Pol polyprotein from transposon TN... 104 3e-24
KYP65229.1 Retrovirus-related Pol polyprotein from transposon TN... 105 6e-24
CAN76029.1 hypothetical protein VITISV_016069 [Vitis vinifera] 108 7e-24
KYP66080.1 Retrovirus-related Pol polyprotein from transposon TN... 105 7e-24
XP_010661281.1 PREDICTED: uncharacterized protein LOC104881771 [... 105 2e-23
CAN77568.1 hypothetical protein VITISV_010611 [Vitis vinifera] 106 2e-23
CAN66710.1 hypothetical protein VITISV_006397 [Vitis vinifera] 105 4e-23
CAN62884.1 hypothetical protein VITISV_039744 [Vitis vinifera] 105 4e-23
>XP_006452100.1 hypothetical protein CICLE_v10010285mg, partial [Citrus clementina]
ESR65340.1 hypothetical protein CICLE_v10010285mg,
partial [Citrus clementina]
Length = 615
Score = 120 bits (302), Expect = 2e-28
Identities = 57/91 (62%), Positives = 71/91 (78%)
Frame = +3
Query: 3 IPLWPKPMTAISIYCDNEAALSRSYNKVYNGKSRHISLRHSYVREQINKGVVTFNYVKSK 182
I LWP+PM +IS+Y D+EA LSR+YNKVYNGKSRHISLRH YV++ I GV+ YVK+
Sbjct: 25 IMLWPQPMPSISLYYDSEATLSRAYNKVYNGKSRHISLRHEYVKQLIADGVINIVYVKTN 84
Query: 183 GNLADPFTKGLGKDVICKTSREMGLKPLNER 275
NLADP TKGL +D++ TS MGLKPL+ +
Sbjct: 85 KNLADPLTKGLSRDLVKDTSFGMGLKPLHNK 115
>KYP48154.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 223
Score = 109 bits (273), Expect = 2e-26
Identities = 49/91 (53%), Positives = 70/91 (76%)
Frame = +3
Query: 3 IPLWPKPMTAISIYCDNEAALSRSYNKVYNGKSRHISLRHSYVREQINKGVVTFNYVKSK 182
IPL KP ++SI+CDN++A++ + NK YNGK+RHI LRH+ V++ + G ++ NYVKS+
Sbjct: 131 IPLGMKPTPSVSIHCDNQSAIAIAKNKSYNGKNRHIQLRHNIVKQLLKDGTISINYVKSE 190
Query: 183 GNLADPFTKGLGKDVICKTSREMGLKPLNER 275
GNLADP TK LG+ +I +TSR MGLKP+ +
Sbjct: 191 GNLADPLTKPLGRKMIYETSRGMGLKPIENK 221
>JAU85822.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Noccaea caerulescens]
Length = 157
Score = 107 bits (268), Expect = 2e-26
Identities = 44/87 (50%), Positives = 68/87 (78%)
Frame = +3
Query: 3 IPLWPKPMTAISIYCDNEAALSRSYNKVYNGKSRHISLRHSYVREQINKGVVTFNYVKSK 182
IP+W KP+ A+ ++CD+++A++R+ + +YNGKSRHI RH +R ++ GV+T +Y++S
Sbjct: 25 IPMWEKPVPALRVHCDSQSAIARALSNLYNGKSRHIRRRHKTIRHLVSTGVITIDYIRSA 84
Query: 183 GNLADPFTKGLGKDVICKTSREMGLKP 263
NLADPFTKGL +D + K+S+ MGLKP
Sbjct: 85 DNLADPFTKGLSRDQVEKSSKGMGLKP 111
>KYP50827.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 188
Score = 108 bits (269), Expect = 3e-26
Identities = 49/91 (53%), Positives = 69/91 (75%)
Frame = +3
Query: 3 IPLWPKPMTAISIYCDNEAALSRSYNKVYNGKSRHISLRHSYVREQINKGVVTFNYVKSK 182
IPL KP ++SI+CDN +A++ + NK YNGK+RHI LRH+ V++ + G ++ NYVKS+
Sbjct: 90 IPLGMKPTPSMSIHCDNHSAIAIAKNKSYNGKNRHIQLRHNIVKQLLKDGTISINYVKSE 149
Query: 183 GNLADPFTKGLGKDVICKTSREMGLKPLNER 275
GNLADP TK LG+ +I +TSR MGLKP+ +
Sbjct: 150 GNLADPLTKPLGRKMIYETSRGMGLKPIENK 180
>CAN77498.1 hypothetical protein VITISV_042223 [Vitis vinifera]
Length = 429
Score = 113 bits (282), Expect = 3e-26
Identities = 48/88 (54%), Positives = 71/88 (80%)
Frame = +3
Query: 3 IPLWPKPMTAISIYCDNEAALSRSYNKVYNGKSRHISLRHSYVREQINKGVVTFNYVKSK 182
IP+WPKP+T I I+CD++AAL+R+ N VYNGKSRH+ RH+ +++ ++ GV+T ++VKSK
Sbjct: 341 IPMWPKPVTTICIHCDSQAALARAKNAVYNGKSRHLRCRHNTIKQLLSNGVITTDFVKSK 400
Query: 183 GNLADPFTKGLGKDVICKTSREMGLKPL 266
N+ADP TKGL ++ + T+R MGLKP+
Sbjct: 401 DNIADPLTKGLYREQVVVTTRGMGLKPI 428
>CAN62076.1 hypothetical protein VITISV_015538 [Vitis vinifera]
Length = 313
Score = 108 bits (269), Expect = 5e-25
Identities = 46/90 (51%), Positives = 70/90 (77%)
Frame = +3
Query: 3 IPLWPKPMTAISIYCDNEAALSRSYNKVYNGKSRHISLRHSYVREQINKGVVTFNYVKSK 182
IP W KP+ I I+CD+++A+ R+ + +YNGKSRHI RH+ +R+ ++ GV++ +YVKSK
Sbjct: 224 IPRWSKPVPPICIHCDSQSAIGRAXSNMYNGKSRHIRRRHNTIRQLLSTGVISVDYVKSK 283
Query: 183 GNLADPFTKGLGKDVICKTSREMGLKPLNE 272
N+ADP TKGL ++++ K+SR MGLKP+ E
Sbjct: 284 DNIADPLTKGLNRELVEKSSRGMGLKPIKE 313
>XP_019228184.1 PREDICTED: valine--tRNA ligase, mitochondrial 1-like [Nicotiana
attenuata]
Length = 1089
Score = 110 bits (274), Expect = 1e-24
Identities = 47/85 (55%), Positives = 68/85 (80%)
Frame = +3
Query: 3 IPLWPKPMTAISIYCDNEAALSRSYNKVYNGKSRHISLRHSYVREQINKGVVTFNYVKSK 182
I LWP+ M A+ ++ D+EA +S++++K+YNGKSRHI+LRH Y+R+ I+ G++T Y+KSK
Sbjct: 201 IKLWPQSMPAVLLHRDSEATMSKAFSKIYNGKSRHIALRHEYIRQLISDGIITVVYIKSK 260
Query: 183 GNLADPFTKGLGKDVICKTSREMGL 257
NLADPFTKGL +D+I T+ MGL
Sbjct: 261 DNLADPFTKGLARDMIISTTSAMGL 285
>KYP54652.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 900
Score = 109 bits (273), Expect = 2e-24
Identities = 49/91 (53%), Positives = 70/91 (76%)
Frame = +3
Query: 3 IPLWPKPMTAISIYCDNEAALSRSYNKVYNGKSRHISLRHSYVREQINKGVVTFNYVKSK 182
IPL KP ++SI+CDN++A++ + NK YNGK+RHI LRH+ V++ + G ++ NYVKS+
Sbjct: 802 IPLGMKPTPSVSIHCDNQSAIAIAKNKSYNGKNRHIQLRHNIVKQLLKDGTISINYVKSE 861
Query: 183 GNLADPFTKGLGKDVICKTSREMGLKPLNER 275
GNLADP TK LG+ +I +TSR MGLKP+ +
Sbjct: 862 GNLADPLTKPLGRKMIYETSRGMGLKPIENK 892
>KYP64289.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1012
Score = 109 bits (273), Expect = 2e-24
Identities = 49/91 (53%), Positives = 70/91 (76%)
Frame = +3
Query: 3 IPLWPKPMTAISIYCDNEAALSRSYNKVYNGKSRHISLRHSYVREQINKGVVTFNYVKSK 182
IPL KP ++SI+CDN++A++ + NK YNGK+RHI LRH+ V++ + G ++ NYVKS+
Sbjct: 914 IPLGMKPTPSVSIHCDNQSAIAIAKNKSYNGKNRHIQLRHNIVKQLLKDGTISINYVKSE 973
Query: 183 GNLADPFTKGLGKDVICKTSREMGLKPLNER 275
GNLADP TK LG+ +I +TSR MGLKP+ +
Sbjct: 974 GNLADPLTKPLGRKMIYETSRGMGLKPIENK 1004
>KYP64290.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1215
Score = 109 bits (273), Expect = 2e-24
Identities = 49/91 (53%), Positives = 70/91 (76%)
Frame = +3
Query: 3 IPLWPKPMTAISIYCDNEAALSRSYNKVYNGKSRHISLRHSYVREQINKGVVTFNYVKSK 182
IPL KP ++SI+CDN++A++ + NK YNGK+RHI LRH+ V++ + G ++ NYVKS+
Sbjct: 1117 IPLGMKPTPSVSIHCDNQSAIAIAKNKSYNGKNRHIQLRHNIVKQLLKDGTISINYVKSE 1176
Query: 183 GNLADPFTKGLGKDVICKTSREMGLKPLNER 275
GNLADP TK LG+ +I +TSR MGLKP+ +
Sbjct: 1177 GNLADPLTKPLGRKMIYETSRGMGLKPIENK 1207
>KYP36589.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 655
Score = 109 bits (272), Expect = 2e-24
Identities = 49/91 (53%), Positives = 70/91 (76%)
Frame = +3
Query: 3 IPLWPKPMTAISIYCDNEAALSRSYNKVYNGKSRHISLRHSYVREQINKGVVTFNYVKSK 182
IPL KP ++SI+CDN++A++ + NK YNGK+RHI LRH+ V++ + G ++ NYVKS+
Sbjct: 560 IPLGMKPTPSVSIHCDNQSAIAIAKNKSYNGKNRHIQLRHNIVKKLLKDGTISINYVKSE 619
Query: 183 GNLADPFTKGLGKDVICKTSREMGLKPLNER 275
GNLADP TK LG+ +I +TSR MGLKP+ +
Sbjct: 620 GNLADPLTKPLGRKMIYETSRGMGLKPIENK 650
>CAX68207.1 Copia-like retrotransposon [Helianthus annuus]
Length = 1358
Score = 109 bits (272), Expect = 3e-24
Identities = 50/87 (57%), Positives = 63/87 (72%)
Frame = +3
Query: 3 IPLWPKPMTAISIYCDNEAALSRSYNKVYNGKSRHISLRHSYVREQINKGVVTFNYVKSK 182
I LW PM I +YCD+EA LS+ YN VYNG SRHI LRH+YVR+ + G + YVK+
Sbjct: 1271 IRLWDVPMPCIPMYCDSEATLSKVYNAVYNGGSRHIGLRHNYVRQLLESGTIKVVYVKTS 1330
Query: 183 GNLADPFTKGLGKDVICKTSREMGLKP 263
NLADPFTK L +D++ T+R+MGLKP
Sbjct: 1331 KNLADPFTKPLTRDLVVNTARDMGLKP 1357
>KYP59837.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 258
Score = 104 bits (260), Expect = 3e-24
Identities = 48/91 (52%), Positives = 69/91 (75%)
Frame = +3
Query: 3 IPLWPKPMTAISIYCDNEAALSRSYNKVYNGKSRHISLRHSYVREQINKGVVTFNYVKSK 182
IPL KP ++SI+CDN++A++ + NK YNGK+RHI LRH+ V++ + G ++ NYVKS+
Sbjct: 160 IPLGMKPTPSVSIHCDNQSAIAIAKNKSYNGKNRHIQLRHNIVKQLLKDGTISINYVKSE 219
Query: 183 GNLADPFTKGLGKDVICKTSREMGLKPLNER 275
GNLADP TK L + +I +TSR MGLKP+ +
Sbjct: 220 GNLADPPTKPLVRKMIYETSRGMGLKPIENK 250
>KYP65229.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 322
Score = 105 bits (262), Expect = 6e-24
Identities = 48/91 (52%), Positives = 67/91 (73%)
Frame = +3
Query: 3 IPLWPKPMTAISIYCDNEAALSRSYNKVYNGKSRHISLRHSYVREQINKGVVTFNYVKSK 182
IPL KP ++SI+ DN++A++ S NK YNGK+RHI LRH+ ++ + G ++ NYVKSK
Sbjct: 224 IPLGMKPTPSVSIHYDNQSAIAISKNKSYNGKNRHIQLRHNIAKQMLKDGTISINYVKSK 283
Query: 183 GNLADPFTKGLGKDVICKTSREMGLKPLNER 275
GNL DP TK LG+ +I +TSR MGLKP+ +
Sbjct: 284 GNLEDPLTKPLGRKMIYETSRGMGLKPIENK 314
>CAN76029.1 hypothetical protein VITISV_016069 [Vitis vinifera]
Length = 1096
Score = 108 bits (269), Expect = 7e-24
Identities = 46/90 (51%), Positives = 70/90 (77%)
Frame = +3
Query: 3 IPLWPKPMTAISIYCDNEAALSRSYNKVYNGKSRHISLRHSYVREQINKGVVTFNYVKSK 182
IP W KP+ I I+CD+++A+ R+ + +YNGKSRHI RH+ +R+ ++ GV++ +YVKSK
Sbjct: 1007 IPRWSKPVPPICIHCDSQSAIGRAQSNMYNGKSRHIRRRHNTIRQLLSTGVISVDYVKSK 1066
Query: 183 GNLADPFTKGLGKDVICKTSREMGLKPLNE 272
N+ADP TKGL ++++ K+SR MGLKP+ E
Sbjct: 1067 DNIADPLTKGLNRELVEKSSRGMGLKPIKE 1096
>KYP66080.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 316
Score = 105 bits (261), Expect = 7e-24
Identities = 48/91 (52%), Positives = 69/91 (75%)
Frame = +3
Query: 3 IPLWPKPMTAISIYCDNEAALSRSYNKVYNGKSRHISLRHSYVREQINKGVVTFNYVKSK 182
IPL KP ++SI+ DN++A++ + NK YNGK+RHI LRH+ V++ + G ++ NYVKS+
Sbjct: 218 IPLEMKPTPSVSIHYDNQSAIAIAKNKSYNGKNRHIQLRHNIVKQLLKDGTISINYVKSE 277
Query: 183 GNLADPFTKGLGKDVICKTSREMGLKPLNER 275
GNLADP TK LG+ +I +TSR MGLKP+ +
Sbjct: 278 GNLADPLTKPLGRKMIYETSRGMGLKPIENK 308
>XP_010661281.1 PREDICTED: uncharacterized protein LOC104881771 [Vitis vinifera]
Length = 455
Score = 105 bits (263), Expect = 2e-23
Identities = 48/88 (54%), Positives = 68/88 (77%)
Frame = +3
Query: 3 IPLWPKPMTAISIYCDNEAALSRSYNKVYNGKSRHISLRHSYVREQINKGVVTFNYVKSK 182
IP ++ +SI+CD++A L+R+Y+ VYNGKSRHIS+RH YVR+ I G+++ ++V+S
Sbjct: 367 IPFTANNVSTVSIHCDSQATLARAYSGVYNGKSRHISIRHEYVRQLIQNGIISISFVRSS 426
Query: 183 GNLADPFTKGLGKDVICKTSREMGLKPL 266
GNLADPFTK L +D++ TSR MGLK L
Sbjct: 427 GNLADPFTKPLTRDLVRITSRGMGLKLL 454
>CAN77568.1 hypothetical protein VITISV_010611 [Vitis vinifera]
Length = 1067
Score = 106 bits (265), Expect = 2e-23
Identities = 49/88 (55%), Positives = 68/88 (77%)
Frame = +3
Query: 3 IPLWPKPMTAISIYCDNEAALSRSYNKVYNGKSRHISLRHSYVREQINKGVVTFNYVKSK 182
IP ++ +SI+CD++A L+R+Y+ VYNGKSRHIS+RH YVR+ I GV++ ++V+S
Sbjct: 979 IPFTANNVSTVSIHCDSQATLARAYSGVYNGKSRHISIRHEYVRQLIQNGVISISFVRSS 1038
Query: 183 GNLADPFTKGLGKDVICKTSREMGLKPL 266
GNLADPFTK L +D++ TSR MGLK L
Sbjct: 1039 GNLADPFTKPLARDLLRITSRGMGLKLL 1066
>CAN66710.1 hypothetical protein VITISV_006397 [Vitis vinifera]
Length = 1105
Score = 105 bits (263), Expect = 4e-23
Identities = 48/88 (54%), Positives = 68/88 (77%)
Frame = +3
Query: 3 IPLWPKPMTAISIYCDNEAALSRSYNKVYNGKSRHISLRHSYVREQINKGVVTFNYVKSK 182
IP ++ +SI+CD++A L+R+Y+ VYNGKSRHIS+RH YVR+ I G+++ ++V+S
Sbjct: 1017 IPFTANNVSTVSIHCDSQATLARAYSGVYNGKSRHISIRHEYVRQLIQNGIISISFVRSS 1076
Query: 183 GNLADPFTKGLGKDVICKTSREMGLKPL 266
GNLADPFTK L +D++ TSR MGLK L
Sbjct: 1077 GNLADPFTKPLTRDLVRITSRGMGLKLL 1104
>CAN62884.1 hypothetical protein VITISV_039744 [Vitis vinifera]
Length = 1136
Score = 105 bits (263), Expect = 4e-23
Identities = 48/88 (54%), Positives = 68/88 (77%)
Frame = +3
Query: 3 IPLWPKPMTAISIYCDNEAALSRSYNKVYNGKSRHISLRHSYVREQINKGVVTFNYVKSK 182
IP ++ +SI+CD++A L+R+Y+ VYNGKSRHIS+RH YVR+ I G+++ ++V+S
Sbjct: 1048 IPFTANNVSTVSIHCDSQATLARAYSGVYNGKSRHISIRHEYVRQLIQNGIISISFVRSS 1107
Query: 183 GNLADPFTKGLGKDVICKTSREMGLKPL 266
GNLADPFTK L +D++ TSR MGLK L
Sbjct: 1108 GNLADPFTKPLTRDLVRITSRGMGLKLL 1135