BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00037853
         (612 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010653646.1 PREDICTED: mediator of RNA polymerase II transcri...    74   5e-12
CBI32830.3 unnamed protein product, partial [Vitis vinifera]           72   2e-11

>XP_010653646.1 PREDICTED: mediator of RNA polymerase II transcription subunit 15a
           isoform X1 [Vitis vinifera]
          Length = 1095

 Score = 74.3 bits (181), Expect = 5e-12
 Identities = 51/152 (33%), Positives = 77/152 (50%), Gaps = 22/152 (14%)
 Frame = -3

Query: 460 MMDGLSCKPEPCDSNIDL*DWIPDLKPNIQETYGNFGSEGMKIQMLPSDANYLNQSNSVV 281
           MMD + CK    +S +D   W      + +E   N   E +K Q+  SDAN LN+  +V 
Sbjct: 1   MMDDVGCKTVVNESGVDAEGWRAGFNWDAREKVVNRIVETLKNQVPCSDANALNELKNVA 60

Query: 280 VNLDEKLYHDLENK---------TMEPVEGISNSNATLSNS--GVSQTTRTETVGSNSSL 134
           V  ++K++ D   K          M  +E +   N + S+S  G+SQTT+ E VG +SSL
Sbjct: 61  VKFEDKIFCDAATKDDYTYRICHRMLKMENLKYQNVSTSSSTPGISQTTKLEVVGHSSSL 120

Query: 133 QTLSVHSHQ-----------SNSYVNTQKELQ 71
           Q +S  SH+           SN++ NTQ+E+Q
Sbjct: 121 QNVSGFSHELVGNSVGQHVRSNAFANTQREMQ 152


>CBI32830.3 unnamed protein product, partial [Vitis vinifera]
          Length = 407

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 22/151 (14%)
 Frame = -3

Query: 457 MDGLSCKPEPCDSNIDL*DWIPDLKPNIQETYGNFGSEGMKIQMLPSDANYLNQSNSVVV 278
           MD + CK    +S +D   W      + +E   N   E +K Q+  SDAN LN+  +V V
Sbjct: 1   MDDVGCKTVVNESGVDAEGWRAGFNWDAREKVVNRIVETLKNQVPCSDANALNELKNVAV 60

Query: 277 NLDEKLYHDLENK---------TMEPVEGISNSNATLSNS--GVSQTTRTETVGSNSSLQ 131
             ++K++ D   K          M  +E +   N + S+S  G+SQTT+ E VG +SSLQ
Sbjct: 61  KFEDKIFCDAATKDDYTYRICHRMLKMENLKYQNVSTSSSTPGISQTTKLEVVGHSSSLQ 120

Query: 130 TLSVHSHQ-----------SNSYVNTQKELQ 71
            +S  SH+           SN++ NTQ+E+Q
Sbjct: 121 NVSGFSHELVGNSVGQHVRSNAFANTQREMQ 151