BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00037812
         (642 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

JAU51269.1 Retrovirus-related Pol polyprotein from transposon TN...   212   1e-64
JAU08363.1 Retrovirus-related Pol polyprotein from transposon TN...   212   8e-60
KYP65378.1 Retrovirus-related Pol polyprotein from transposon TN...   169   4e-48
OMP03432.1 Integrase, catalytic core [Corchorus capsularis]           177   8e-48
KYP67736.1 Retrovirus-related Pol polyprotein from transposon TN...   160   3e-45
KYP67758.1 Retrovirus-related Pol polyprotein from transposon TN...   148   2e-41
XP_013688817.1 PREDICTED: uncharacterized protein LOC106392554, ...   157   8e-41
KYP66219.1 Retrovirus-related Pol polyprotein from transposon TN...   149   7e-38
KYP69041.1 Retrovirus-related Pol polyprotein from transposon TN...   149   7e-38
KYP44533.1 Retrovirus-related Pol polyprotein from transposon TN...   149   7e-38
CAB71063.1 copia-type polyprotein [Arabidopsis thaliana]              149   7e-38
AAD50001.1 Hypothetical protein [Arabidopsis thaliana]                149   7e-38
KYP66220.1 Retrovirus-related Pol polyprotein from transposon TN...   148   1e-37
AAG50698.1 copia-type polyprotein, putative [Arabidopsis thalian...   147   2e-37
CAB75469.1 copia-type reverse transcriptase-like protein [Arabid...   146   8e-37
AAG60117.1 copia-type polyprotein, putative [Arabidopsis thaliana]    144   3e-36
ABR16307.1 unknown [Picea sitchensis]                                 140   3e-36
GAU28864.1 hypothetical protein TSUD_293160 [Trifolium subterran...   142   2e-35
GAU44031.1 hypothetical protein TSUD_349630 [Trifolium subterran...   142   2e-35
CAN82221.1 hypothetical protein VITISV_015226 [Vitis vinifera]        142   2e-35

>JAU51269.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Noccaea caerulescens]
          Length = 334

 Score =  212 bits (539), Expect = 1e-64
 Identities = 111/207 (53%), Positives = 142/207 (68%), Gaps = 12/207 (5%)
 Frame = -2

Query: 599 ILYARLGHVGY*MLQQICLKKLLNGVPIMKGINKGVVCQGCQYGKSHVLPFNNSENQRKN 420
           I +ARLGH+    L+ +  K L+NG+P +K  ++G +C+GCQYGKSH LPF+NS ++   
Sbjct: 55  IWHARLGHINMTKLKVMVNKDLVNGLPKLKIQDEGKLCEGCQYGKSHRLPFDNSTSRCNA 114

Query: 419 PFELVHADLMGPTKTPSYRGFHDMI--VDDFSRSSWVYFLNEKSEAFTKFLEFESTIKRE 246
           P E VH+DLMGPT+T SY GF  M+  VDDFSR +WVYF+ EKSE F+KF EF+ T++ E
Sbjct: 115 PLERVHSDLMGPTRTSSYSGFRYMLLFVDDFSRYTWVYFVKEKSEVFSKFQEFKVTVEGE 174

Query: 245 FGSKLGCLRTDNGGGEFMSKEFFKNCDVKGIK*QMSYPSTPHQNGVVERKIVHLS----- 81
            G K+  LRTDN GGEFMS EF   C  +GIK + + P TP QNGV ERKI HLS     
Sbjct: 175 LGRKIKTLRTDN-GGEFMSNEFLSFCRKQGIKREFTCPYTPQQNGVAERKIRHLSETCRS 233

Query: 80  -----NLPRELWAEVMQCACHVTNCLP 15
                NLP+ LWAE M+CA +V N +P
Sbjct: 234 WLHAKNLPKALWAEGMRCAAYVINRMP 260


>JAU08363.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Noccaea
            caerulescens]
          Length = 1335

 Score =  212 bits (539), Expect = 8e-60
 Identities = 111/207 (53%), Positives = 142/207 (68%), Gaps = 12/207 (5%)
 Frame = -2

Query: 599  ILYARLGHVGY*MLQQICLKKLLNGVPIMKGINKGVVCQGCQYGKSHVLPFNNSENQRKN 420
            I +ARLGH+    L+ +  K L+NG+P +K  ++G +C+GCQYGKSH LPF+NS ++   
Sbjct: 439  IWHARLGHINMTKLKVMVNKDLVNGLPKLKIKDEGKLCEGCQYGKSHRLPFDNSTSRCNA 498

Query: 419  PFELVHADLMGPTKTPSYRGFHDMI--VDDFSRSSWVYFLNEKSEAFTKFLEFESTIKRE 246
            P E VH+DLMGPT+T SY GF  M+  VDDFSR +WVYF+ EKSE F+KF EF+ T++ E
Sbjct: 499  PLERVHSDLMGPTRTSSYSGFRYMLLFVDDFSRYTWVYFVKEKSEVFSKFQEFKVTVEGE 558

Query: 245  FGSKLGCLRTDNGGGEFMSKEFFKNCDVKGIK*QMSYPSTPHQNGVVERKIVHLS----- 81
             G K+  LRTDN GGEFMS EF   C  +GIK + + P TP QNGV ERKI HLS     
Sbjct: 559  LGRKIKTLRTDN-GGEFMSNEFLSFCRKQGIKREFTCPYTPQQNGVAERKIRHLSETCRS 617

Query: 80   -----NLPRELWAEVMQCACHVTNCLP 15
                 NLP+ LWAE M+CA +V N +P
Sbjct: 618  WLHAKNLPKALWAEGMRCAAYVINRMP 644


>KYP65378.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 337

 Score =  169 bits (429), Expect = 4e-48
 Identities = 90/205 (43%), Positives = 129/205 (62%), Gaps = 12/205 (5%)
 Frame = -2

Query: 593 YARLGHVGY*MLQQICLKKLLNGVPIMKGINKGVVCQGCQYGKSHVLPFNNSENQRKNPF 414
           +ARLGHV Y  L+ +  + +L G+P ++ + + VVC GCQYGK+H LP+  S+ + K P 
Sbjct: 36  HARLGHVSYNRLKAMMKQSMLRGLPNLE-MRENVVCVGCQYGKAHELPYEESKYKAKAPL 94

Query: 413 ELVHADLMGPTK--TPSYRGFHDMIVDDFSRSSWVYFLNEKSEAFTKFLEFESTIKREFG 240
           ELVH+D+ GP K  + S   +   I+DD+SR  WVYFL EKSEA  KF+EF+  I++E G
Sbjct: 95  ELVHSDVFGPVKQLSISKNKYMITIIDDYSRYVWVYFLKEKSEALKKFIEFKEKIEKEVG 154

Query: 239 SKLGCLRTDNGGGEFMSKEFFKNCDVKGIK*QMSYPSTPHQNGVVERK----------IV 90
             + CLRTDN GGE+ SKEF +     GI+ Q++  +T  QNG++ERK          ++
Sbjct: 155 RMIRCLRTDN-GGEYTSKEFNQYLQKCGIRRQLTCQNTLQQNGIIERKNRHLVKTCRSML 213

Query: 89  HLSNLPRELWAEVMQCACHVTNCLP 15
           H  N+P   W E M+ + +V N LP
Sbjct: 214 HSKNVPPRFWTECMKTSAYVINRLP 238


>OMP03432.1 Integrase, catalytic core [Corchorus capsularis]
          Length = 1347

 Score =  177 bits (450), Expect = 8e-48
 Identities = 94/205 (45%), Positives = 128/205 (62%), Gaps = 12/205 (5%)
 Frame = -2

Query: 593  YARLGHVGY*MLQQICLKKLLNGVPIMKGINKGVVCQGCQYGKSHVLPFNNSENQRKNPF 414
            +ARLGHV Y  L+ +  K +L G+P +  + +  VC GCQYG++H LP+  S+ + K P 
Sbjct: 475  HARLGHVSYFKLKAMMKKSMLKGLPQLD-VKEDTVCAGCQYGRAHQLPYEESKFKAKMPL 533

Query: 413  ELVHADLMGPTKTPSYRGFHDMI--VDDFSRSSWVYFLNEKSEAFTKFLEFESTIKREFG 240
            +LVH+D+ G  K PS  G+  MI  +DD+SR  WV F+ EKSEA TKF EF+  +++E G
Sbjct: 534  QLVHSDVFGKMKQPSVSGYQYMITFIDDYSRYVWVDFMKEKSEALTKFKEFKERVEKEVG 593

Query: 239  SKLGCLRTDNGGGEFMSKEFFKNCDVKGIK*QMSYPSTPHQNGVVERKIVHLS------- 81
             K+ CLRTDN GGE+ SKEF        I+ Q++ P+TP QNGV ERK +HL+       
Sbjct: 594  RKIQCLRTDN-GGEYTSKEFSNFLRECRIRRQLTCPNTPQQNGVAERKNMHLAEICRSML 652

Query: 80   ---NLPRELWAEVMQCACHVTNCLP 15
               N+P   WAE M+   HV N LP
Sbjct: 653  HARNVPPRFWAECMKTVAHVVNRLP 677


>KYP67736.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 259

 Score =  160 bits (404), Expect = 3e-45
 Identities = 83/172 (48%), Positives = 116/172 (67%), Gaps = 2/172 (1%)
 Frame = -2

Query: 593 YARLGHVGY*MLQQICLKKLLNGVPIMKGINKGVVCQGCQYGKSHVLPFNNSENQRKNPF 414
           +ARLGHV Y  L+ +  + +L G+P ++ + + VVC GCQYGK+H LP+  S+ + K P 
Sbjct: 32  HARLGHVSYNRLKAMMKQSMLRGLPNLE-MRENVVCVGCQYGKAHELPYEESKYKAKAPL 90

Query: 413 ELVHADLMGPTK--TPSYRGFHDMIVDDFSRSSWVYFLNEKSEAFTKFLEFESTIKREFG 240
           ELVH+D+ GP K  + S   +   I+DD+SR  WV F+ EKSEA  KF+EF+  I++E G
Sbjct: 91  ELVHSDVFGPVKQLSISKNKYMITIIDDYSRYVWVDFMKEKSEALKKFIEFKEKIEKEVG 150

Query: 239 SKLGCLRTDNGGGEFMSKEFFKNCDVKGIK*QMSYPSTPHQNGVVERKIVHL 84
           S + CLRTDN GGE+ SKEF +     GI+ Q++ P+TP QNG+ ERK  HL
Sbjct: 151 SMIRCLRTDN-GGEYTSKEFNQYLQKCGIRRQLTCPNTPQQNGIAERKNRHL 201


>KYP67758.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 191

 Score =  148 bits (373), Expect = 2e-41
 Identities = 76/162 (46%), Positives = 110/162 (67%), Gaps = 2/162 (1%)
 Frame = -2

Query: 593 YARLGHVGY*MLQQICLKKLLNGVPIMKGINKGVVCQGCQYGKSHVLPFNNSENQRKNPF 414
           +ARLGHV Y  L+ +  + +L G+P ++ + + VVC GCQYGK+H LP+  S+ + K P 
Sbjct: 32  HARLGHVSYNRLKAMMKQSMLRGLPNLE-MRENVVCVGCQYGKAHELPYEESKYKAKAPL 90

Query: 413 ELVHADLMGPTK--TPSYRGFHDMIVDDFSRSSWVYFLNEKSEAFTKFLEFESTIKREFG 240
           ELVH+D+ GP K  + S   +   I+DD+SR  WV F+ EKSEA  KF+EF+  I++E G
Sbjct: 91  ELVHSDVFGPVKQLSISKNKYMITIIDDYSRYVWVDFMKEKSEALKKFIEFKEKIEKEVG 150

Query: 239 SKLGCLRTDNGGGEFMSKEFFKNCDVKGIK*QMSYPSTPHQN 114
           S + CLRTDN GGE+ SKEF +     GI+ Q++ P+TPH++
Sbjct: 151 SMIRCLRTDN-GGEYTSKEFNQYLQKCGIRRQLTCPNTPHKD 191


>XP_013688817.1 PREDICTED: uncharacterized protein LOC106392554, partial [Brassica
            napus]
          Length = 2682

 Score =  157 bits (398), Expect = 8e-41
 Identities = 82/206 (39%), Positives = 124/206 (60%), Gaps = 13/206 (6%)
 Frame = -2

Query: 593  YARLGHVGY*MLQQICLKKLLNGVPIMKGINKGVVCQGCQYGKSHVLPF-NNSENQRKNP 417
            + R GH+ +  L+ +  K+++ G+P +   N+  VC+GC  GK   + F   SE + + P
Sbjct: 477  HLRFGHLNFGGLELLSKKEMVKGLPCINHPNQ--VCEGCLLGKQFKMSFPKESETRARKP 534

Query: 416  FELVHADLMGPTKTPSY--RGFHDMIVDDFSRSSWVYFLNEKSEAFTKFLEFESTIKREF 243
             EL+H D+ GP K  S     +  + +DDFSR +WVYFL +KSE F  F +F++ +++E 
Sbjct: 535  LELIHTDVCGPIKPSSLGKSNYFLLFIDDFSRKTWVYFLKQKSEVFENFKKFKAHVEKES 594

Query: 242  GSKLGCLRTDNGGGEFMSKEFFKNCDVKGIK*QMSYPSTPHQNGVVERK----------I 93
            G K+  +R+D  GGEFMSKEF K C+  GI+ Q++ P TP QNGV ERK          +
Sbjct: 595  GLKIKSMRSDR-GGEFMSKEFLKYCEDNGIRRQLTVPRTPQQNGVAERKNRTILEMARSM 653

Query: 92   VHLSNLPRELWAEVMQCACHVTNCLP 15
            +    LP+ELWAE + CA +++N  P
Sbjct: 654  LKSKKLPKELWAEAVACAVYISNRSP 679



 Score =  157 bits (398), Expect = 8e-41
 Identities = 82/206 (39%), Positives = 124/206 (60%), Gaps = 13/206 (6%)
 Frame = -2

Query: 593  YARLGHVGY*MLQQICLKKLLNGVPIMKGINKGVVCQGCQYGKSHVLPF-NNSENQRKNP 417
            + R GH+ +  L+ +  K+++ G+P +   N+  VC+GC  GK   + F   SE + + P
Sbjct: 1816 HLRFGHLNFGGLELLSKKEMVKGLPCINHPNQ--VCEGCLLGKQFKMSFPKESETRARKP 1873

Query: 416  FELVHADLMGPTKTPSY--RGFHDMIVDDFSRSSWVYFLNEKSEAFTKFLEFESTIKREF 243
             EL+H D+ GP K  S     +  + +DDFSR +WVYFL +KSE F  F +F++ +++E 
Sbjct: 1874 LELIHTDVCGPIKPSSLGKSNYFLLFIDDFSRKTWVYFLKQKSEVFENFKKFKAHVEKES 1933

Query: 242  GSKLGCLRTDNGGGEFMSKEFFKNCDVKGIK*QMSYPSTPHQNGVVERK----------I 93
            G K+  +R+D  GGEFMSKEF K C+  GI+ Q++ P TP QNGV ERK          +
Sbjct: 1934 GLKIKSMRSDR-GGEFMSKEFLKYCEDNGIRRQLTVPRTPQQNGVAERKNRTILEMARSM 1992

Query: 92   VHLSNLPRELWAEVMQCACHVTNCLP 15
            +    LP+ELWAE + CA +++N  P
Sbjct: 1993 LKSKKLPKELWAEAVACAVYISNRSP 2018


>KYP66219.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1033

 Score =  149 bits (376), Expect = 7e-38
 Identities = 81/206 (39%), Positives = 121/206 (58%), Gaps = 13/206 (6%)
 Frame = -2

Query: 593  YARLGHVGY*MLQQICLKKLLNGVPIMKGINKGVVCQGCQYGKSHVLPF-NNSENQRKNP 417
            + R GH+ +  L+ +  K ++ G+P +   N+  VC+GC  GK   L F   S+++ + P
Sbjct: 401  HLRFGHLNFKGLELLSKKAMVRGLPCITHPNQ--VCEGCLLGKQFRLSFPKESDSRAQKP 458

Query: 416  FELVHADLMGPTKTPSY--RGFHDMIVDDFSRSSWVYFLNEKSEAFTKFLEFESTIKREF 243
             EL+H D+ GP K  S     +  + +DDFSR +WVYFL EKSE F  F +F++ +++E 
Sbjct: 459  LELIHTDVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKES 518

Query: 242  GSKLGCLRTDNGGGEFMSKEFFKNCDVKGIK*QMSYPSTPHQNGVVERK----------I 93
            G  +  LR+D  GGEF SKEF K C+  GI+ Q++ P +P QNGV ERK          +
Sbjct: 519  GLLIKALRSDR-GGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSM 577

Query: 92   VHLSNLPRELWAEVMQCACHVTNCLP 15
            +    LP+E WAE + CA ++TN  P
Sbjct: 578  LKSKKLPKEFWAEAVACAVYLTNRSP 603


>KYP69041.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1342

 Score =  149 bits (376), Expect = 7e-38
 Identities = 81/206 (39%), Positives = 121/206 (58%), Gaps = 13/206 (6%)
 Frame = -2

Query: 593  YARLGHVGY*MLQQICLKKLLNGVPIMKGINKGVVCQGCQYGKSHVLPF-NNSENQRKNP 417
            + R GH+ +  L+ +  K ++ G+P +   N+  VC+GC  GK   L F   S+++ + P
Sbjct: 467  HLRFGHLNFKGLELLSKKAMVRGLPCITHPNQ--VCEGCLLGKQFRLSFPKESDSRAQKP 524

Query: 416  FELVHADLMGPTKTPSY--RGFHDMIVDDFSRSSWVYFLNEKSEAFTKFLEFESTIKREF 243
             EL+H D+ GP K  S     +  + +DDFSR +WVYFL EKSE F  F +F++ +++E 
Sbjct: 525  LELIHTDVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKES 584

Query: 242  GSKLGCLRTDNGGGEFMSKEFFKNCDVKGIK*QMSYPSTPHQNGVVERK----------I 93
            G  +  LR+D  GGEF SKEF K C+  GI+ Q++ P +P QNGV ERK          +
Sbjct: 585  GLLIKALRSDR-GGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSM 643

Query: 92   VHLSNLPRELWAEVMQCACHVTNCLP 15
            +    LP+E WAE + CA ++TN  P
Sbjct: 644  LKSKKLPKEFWAEAVACAVYLTNRSP 669


>KYP44533.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1342

 Score =  149 bits (376), Expect = 7e-38
 Identities = 81/206 (39%), Positives = 121/206 (58%), Gaps = 13/206 (6%)
 Frame = -2

Query: 593  YARLGHVGY*MLQQICLKKLLNGVPIMKGINKGVVCQGCQYGKSHVLPF-NNSENQRKNP 417
            + R GH+ +  L+ +  K ++ G+P +   N+  VC+GC  GK   L F   S+++ + P
Sbjct: 467  HLRFGHLNFKGLELLSKKAMVRGLPCITHPNQ--VCEGCLLGKQFRLSFPKESDSRAQKP 524

Query: 416  FELVHADLMGPTKTPSY--RGFHDMIVDDFSRSSWVYFLNEKSEAFTKFLEFESTIKREF 243
             EL+H D+ GP K  S     +  + +DDFSR +WVYFL EKSE F  F +F++ +++E 
Sbjct: 525  LELIHTDVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKES 584

Query: 242  GSKLGCLRTDNGGGEFMSKEFFKNCDVKGIK*QMSYPSTPHQNGVVERK----------I 93
            G  +  LR+D  GGEF SKEF K C+  GI+ Q++ P +P QNGV ERK          +
Sbjct: 585  GLLIKALRSDR-GGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSM 643

Query: 92   VHLSNLPRELWAEVMQCACHVTNCLP 15
            +    LP+E WAE + CA ++TN  P
Sbjct: 644  LKSKKLPKEFWAEAVACAVYLTNRSP 669


>CAB71063.1 copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  149 bits (376), Expect = 7e-38
 Identities = 80/206 (38%), Positives = 122/206 (59%), Gaps = 13/206 (6%)
 Frame = -2

Query: 593  YARLGHVGY*MLQQICLKKLLNGVPIMKGINKGVVCQGCQYGKSHVLPF-NNSENQRKNP 417
            + R GH+ +  L+ +  K+++ G+P +   N+  VC+GC  GK   + F   S ++ + P
Sbjct: 469  HLRFGHLNFGGLELLSRKEMVRGLPCINHPNQ--VCEGCLLGKQFKMSFPKESSSRAQKP 526

Query: 416  FELVHADLMGPTKTPSY--RGFHDMIVDDFSRSSWVYFLNEKSEAFTKFLEFESTIKREF 243
             EL+H D+ GP K  S     +  + +DDFSR +WVYFL EKSE F  F +F++ +++E 
Sbjct: 527  LELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKES 586

Query: 242  GSKLGCLRTDNGGGEFMSKEFFKNCDVKGIK*QMSYPSTPHQNGVVERK----------I 93
            G  +  +R+D  GGEF SKEF K C+  GI+ Q++ P +P QNGVVERK          +
Sbjct: 587  GLVIKTMRSDR-GGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSM 645

Query: 92   VHLSNLPRELWAEVMQCACHVTNCLP 15
            +    LP+ELWAE + CA ++ N  P
Sbjct: 646  LKSKRLPKELWAEAVACAVYLLNRSP 671


>AAD50001.1 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  149 bits (376), Expect = 7e-38
 Identities = 80/206 (38%), Positives = 122/206 (59%), Gaps = 13/206 (6%)
 Frame = -2

Query: 593  YARLGHVGY*MLQQICLKKLLNGVPIMKGINKGVVCQGCQYGKSHVLPF-NNSENQRKNP 417
            + R GH+ +  L+ +  K+++ G+P +   N+  VC+GC  GK   + F   S ++ + P
Sbjct: 469  HLRFGHLNFGGLELLSRKEMVRGLPCINHPNQ--VCEGCLLGKQFKMSFPKESSSRAQKP 526

Query: 416  FELVHADLMGPTKTPSY--RGFHDMIVDDFSRSSWVYFLNEKSEAFTKFLEFESTIKREF 243
             EL+H D+ GP K  S     +  + +DDFSR +WVYFL EKSE F  F +F++ +++E 
Sbjct: 527  LELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKES 586

Query: 242  GSKLGCLRTDNGGGEFMSKEFFKNCDVKGIK*QMSYPSTPHQNGVVERK----------I 93
            G  +  +R+D  GGEF SKEF K C+  GI+ Q++ P +P QNGVVERK          +
Sbjct: 587  GLVIKTMRSDR-GGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSM 645

Query: 92   VHLSNLPRELWAEVMQCACHVTNCLP 15
            +    LP+ELWAE + CA ++ N  P
Sbjct: 646  LKSKRLPKELWAEAVACAVYLLNRSP 671


>KYP66220.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1331

 Score =  148 bits (374), Expect = 1e-37
 Identities = 81/206 (39%), Positives = 120/206 (58%), Gaps = 13/206 (6%)
 Frame = -2

Query: 593  YARLGHVGY*MLQQICLKKLLNGVPIMKGINKGVVCQGCQYGKSHVLPF-NNSENQRKNP 417
            + R GH+ +  L  +  K ++ G+P +   N+  VC+GC  GK   L F   S+++ + P
Sbjct: 456  HLRFGHLNFKGLDLLSKKAMVRGLPCITHPNQ--VCEGCLLGKQFRLSFPKESDSRAQKP 513

Query: 416  FELVHADLMGPTKTPSY--RGFHDMIVDDFSRSSWVYFLNEKSEAFTKFLEFESTIKREF 243
             EL+H D+ GP K  S     +  + +DDFSR +WVYFL EKSE F  F +F++ +++E 
Sbjct: 514  LELIHTDVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKES 573

Query: 242  GSKLGCLRTDNGGGEFMSKEFFKNCDVKGIK*QMSYPSTPHQNGVVERK----------I 93
            G  +  LR+D  GGEF SKEF K C+  GI+ Q++ P +P QNGV ERK          +
Sbjct: 574  GLLIKALRSDR-GGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSM 632

Query: 92   VHLSNLPRELWAEVMQCACHVTNCLP 15
            +    LP+E WAE + CA ++TN  P
Sbjct: 633  LKSKKLPKEFWAEAVACAVYLTNRSP 658


>AAG50698.1 copia-type polyprotein, putative [Arabidopsis thaliana] AAG50765.1
            copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  147 bits (372), Expect = 2e-37
 Identities = 79/206 (38%), Positives = 121/206 (58%), Gaps = 13/206 (6%)
 Frame = -2

Query: 593  YARLGHVGY*MLQQICLKKLLNGVPIMKGINKGVVCQGCQYGKSHVLPF-NNSENQRKNP 417
            + R GH+ +  L+ +  K+++ G+P +   N+  VC+GC  GK   + F   S ++ + P
Sbjct: 469  HLRFGHLNFGGLELLSRKEMVRGLPCINHPNQ--VCEGCLLGKQFKMSFPKESSSRAQKP 526

Query: 416  FELVHADLMGPTKTPSY--RGFHDMIVDDFSRSSWVYFLNEKSEAFTKFLEFESTIKREF 243
             EL+H D+ GP K  S     +  + +DDFSR +WVYFL EKSE F  F +F++ +++E 
Sbjct: 527  LELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKES 586

Query: 242  GSKLGCLRTDNGGGEFMSKEFFKNCDVKGIK*QMSYPSTPHQNGVVERK----------I 93
            G  +  +R+D  GGEF SKEF K C+  GI+ Q++ P +P QNGV ERK          +
Sbjct: 587  GLVIKTMRSDR-GGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSM 645

Query: 92   VHLSNLPRELWAEVMQCACHVTNCLP 15
            +    LP+ELWAE + CA ++ N  P
Sbjct: 646  LKSKRLPKELWAEAVACAVYLLNRSP 671


>CAB75469.1 copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1272

 Score =  146 bits (368), Expect = 8e-37
 Identities = 78/206 (37%), Positives = 121/206 (58%), Gaps = 13/206 (6%)
 Frame = -2

Query: 593  YARLGHVGY*MLQQICLKKLLNGVPIMKGINKGVVCQGCQYGKSHVLPF-NNSENQRKNP 417
            + R GH+ +  L+ +  K+++ G+P +   N+  VC+GC  G    + F   S ++ + P
Sbjct: 469  HLRFGHLNFGGLELLSRKEMVRGLPCINHPNQ--VCEGCLLGNQFKMSFPKESSSRAQKP 526

Query: 416  FELVHADLMGPTKTPSY--RGFHDMIVDDFSRSSWVYFLNEKSEAFTKFLEFESTIKREF 243
             EL+H D+ GP K  S     +  + +DDFSR +WVYFL EKSE F  F +F++ +++E 
Sbjct: 527  LELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKES 586

Query: 242  GSKLGCLRTDNGGGEFMSKEFFKNCDVKGIK*QMSYPSTPHQNGVVERK----------I 93
            G  +  +R+D+ GGEF SKEF K C+  GI+ Q++ P +P QNGV ERK          +
Sbjct: 587  GLVIKTMRSDS-GGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSM 645

Query: 92   VHLSNLPRELWAEVMQCACHVTNCLP 15
            +    LP+ELWAE + CA ++ N  P
Sbjct: 646  LKSKRLPKELWAEAVACAVYLLNRSP 671


>AAG60117.1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  144 bits (364), Expect = 3e-36
 Identities = 78/206 (37%), Positives = 120/206 (58%), Gaps = 13/206 (6%)
 Frame = -2

Query: 593  YARLGHVGY*MLQQICLKKLLNGVPIMKGINKGVVCQGCQYGKSHVLPF-NNSENQRKNP 417
            + R GH+ +  L+ +  K+++ G+P +   N+  VC+GC  GK   + F   S ++ +  
Sbjct: 469  HLRFGHLNFGGLELLSRKEMVRGLPCINHPNQ--VCEGCLLGKQFKMSFPKESSSRAQKS 526

Query: 416  FELVHADLMGPTKTPSY--RGFHDMIVDDFSRSSWVYFLNEKSEAFTKFLEFESTIKREF 243
             EL+H D+ GP K  S     +  + +DDFSR +WVYFL EKSE F  F +F++ +++E 
Sbjct: 527  LELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKES 586

Query: 242  GSKLGCLRTDNGGGEFMSKEFFKNCDVKGIK*QMSYPSTPHQNGVVERK----------I 93
            G  +  +R+D  GGEF SKEF K C+  GI+ Q++ P +P QNGV ERK          +
Sbjct: 587  GLVIKTMRSDR-GGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSM 645

Query: 92   VHLSNLPRELWAEVMQCACHVTNCLP 15
            +    LP+ELWAE + CA ++ N  P
Sbjct: 646  LKSKRLPKELWAEAVACAVYLLNRSP 671


>ABR16307.1 unknown [Picea sitchensis]
          Length = 407

 Score =  140 bits (353), Expect = 3e-36
 Identities = 79/206 (38%), Positives = 116/206 (56%), Gaps = 13/206 (6%)
 Frame = -2

Query: 593 YARLGHVGY*MLQQICLKKLLNGVPIMKGINKGVVCQGCQYGKSHVLPFNNSENQR-KNP 417
           + R+GH+ Y  L  +   +++ G+P  K      VC+GC  GK H+  F   ++ R K P
Sbjct: 76  HERMGHLNYKSLSLMKRFEMVYGLP--KISQSQGVCEGCMSGKQHMEKFIKGKSWRAKTP 133

Query: 416 FELVHADLMGPTKTPSYRGFHDMI--VDDFSRSSWVYFLNEKSEAFTKFLEFESTIKREF 243
             LVH+DLMGP + PS  G   ++  +DD+SR  WVYFL  K E F KF EF++ ++++ 
Sbjct: 134 LHLVHSDLMGPLEHPSISGSRYVLTFIDDYSRRIWVYFLKNKDEVFEKFKEFKAFVEKQS 193

Query: 242 GSKLGCLRTDNGGGEFMSKEFFKNCDVKGIK*QMSYPSTPHQNGVVERK----------I 93
           G  +  LRTDN G E+++KEF   C   GIK + + P TP QNGV ERK          +
Sbjct: 194 GKSIKILRTDN-GKEYVNKEFDHYCKYNGIKREHTVPYTPQQNGVAERKNRTLMEMARCM 252

Query: 92  VHLSNLPRELWAEVMQCACHVTNCLP 15
           +H  N+  + WAE +  A ++ N  P
Sbjct: 253 LHARNMDPKFWAEAINTATYIVNRTP 278


>GAU28864.1 hypothetical protein TSUD_293160 [Trifolium subterraneum]
          Length = 951

 Score =  142 bits (358), Expect = 2e-35
 Identities = 75/206 (36%), Positives = 120/206 (58%), Gaps = 13/206 (6%)
 Frame = -2

Query: 593  YARLGHVGY*MLQQICLKKLLNGVPIMKGINKGVVCQGCQYGKSHVLPF-NNSENQRKNP 417
            + R GH+ +  L+ +  K+++ G+P +   N+  VC+GC  GK   + F   S ++ + P
Sbjct: 468  HLRFGHLNFGGLELLSKKEMVRGLPYINHPNQ--VCEGCLLGKQFKMSFPKESSSRAQKP 525

Query: 416  FELVHADLMGPTKTPSY--RGFHDMIVDDFSRSSWVYFLNEKSEAFTKFLEFESTIKREF 243
             EL+H D+ GP K  S     +  + +D+FSR +WVYFL EKSE F  F +F++ +++E 
Sbjct: 526  LELIHMDVCGPIKPRSLGKSNYFLLFIDNFSRKTWVYFLKEKSEVFENFKKFKALVEKES 585

Query: 242  GSKLGCLRTDNGGGEFMSKEFFKNCDVKGIK*QMSYPSTPHQNGVVERK----------I 93
            G  +  +R+D  GGEF S +F K C+   I+ Q++ P +P QNGV ERK          +
Sbjct: 586  GRVIKAIRSDR-GGEFTSNDFLKYCEDNDIRRQLTVPRSPQQNGVTERKNRTILEMARSM 644

Query: 92   VHLSNLPRELWAEVMQCACHVTNCLP 15
            +    LP+ELWAE + CA +++N  P
Sbjct: 645  LKSKRLPKELWAEAVACAVYLSNRSP 670


>GAU44031.1 hypothetical protein TSUD_349630 [Trifolium subterraneum]
          Length = 761

 Score =  142 bits (357), Expect = 2e-35
 Identities = 77/214 (35%), Positives = 120/214 (56%), Gaps = 12/214 (5%)
 Frame = -2

Query: 620 VTVLST*ILYARLGHVGY*MLQQICLKKLLNGVPIMKGINKGVVCQGCQYGKSHVLPFNN 441
           VT  +T + + RLGH  +  +  +   +L+ GVP +    K + C+ CQ+GK    PF  
Sbjct: 361 VTTSTTDLWHKRLGHFHHSGMDYMLKNQLVRGVPSLT--EKAIECEACQFGKQTRKPFPT 418

Query: 440 SENQRKNPFELVHADLMGPTKTPSYRG--FHDMIVDDFSRSSWVYFLNEKSEAFTKFLEF 267
           S  +     +L+H D+ GP +TPS  G  ++ + +DD +R  W+YFL  KSE  T F +F
Sbjct: 419 SSWRANQKLQLIHTDVAGPQRTPSLNGSLYYIVFIDDLTRMCWIYFLRYKSEVATVFWKF 478

Query: 266 ESTIKREFGSKLGCLRTDNGGGEFMSKEFFKNCDVKGIK*QMSYPSTPHQNGVVERK--- 96
           ++ ++ +  S +  LR+DN G E++S +F + CD  GI+ Q++ P TP QNGV ERK   
Sbjct: 479 KAHVENQSNSHIQILRSDN-GKEYLSNQFQQFCDEAGIEHQLTAPYTPQQNGVSERKNRS 537

Query: 95  -------IVHLSNLPRELWAEVMQCACHVTNCLP 15
                  ++H   LP++LWAE    A  + N LP
Sbjct: 538 IMGMVRCMLHQQELPKKLWAEAASTAVFIQNRLP 571


>CAN82221.1 hypothetical protein VITISV_015226 [Vitis vinifera]
          Length = 1007

 Score =  142 bits (357), Expect = 2e-35
 Identities = 84/216 (38%), Positives = 119/216 (55%), Gaps = 12/216 (5%)
 Frame = -2

Query: 626 VEVTVLST*ILYARLGHVGY*MLQQICLKKLLNGVPIMKGINKGVVCQGCQYGKSHVLPF 447
           + +T ++T + ++RLGH          LK +L    I    +K  VC  CQ+ KSH LPF
Sbjct: 165 ISLTTITT-LWHSRLGHPA-----DNILKHILTSCNISHQCHKNNVCCACQFAKSHKLPF 218

Query: 446 NNSENQRKNPFELVHADLMGPTKTPSYRG--FHDMIVDDFSRSSWVYFLNEKSEAFTKFL 273
           N S ++  +PF L+HADL GPT  PS  G  +  + VDDFS  SW+Y L+ K +A + F+
Sbjct: 219 NVSVSRASHPFALLHADLWGPTSIPSTTGARYFILFVDDFSHFSWIYPLHSKDQALSXFI 278

Query: 272 EFESTIKREFGSKLGCLRTDNGGGEFMSKEFFKNCDVKGIK*QMSYPSTPHQNGVVERKI 93
           +F+S ++ +F S++ CLR+DN GGEF  K F       GIK Q S P TP QNG  ERK+
Sbjct: 279 KFKSLVENQFNSRIQCLRSDN-GGEF--KAFSSYLATHGIKSQFSCPYTPEQNGRAERKL 335

Query: 92  VHL----------SNLPRELWAEVMQCACHVTNCLP 15
            H+          ++LP + W         + N LP
Sbjct: 336 XHIIETGLALLATASLPFKFWLYAFHTXIFLINRLP 371